Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g26887 Brassica carinata HOM05D000113 ORTHO05D095420 4.0e-50 201.1 96 100.0
BcaB06g26905 Brassica carinata HOM05D000113 ORTHO05D005496 1.2e-30 136.3 72 91.7
C03p05000 Brassica napus HOM05D000113 ORTHO05D005496 2.5e-28 128.6 86 73.3
BraA03t09794Z Brassica rapa HOM05D000113 ORTHO05D005496 2.5e-28 128.6 86 73.3
BolC3t13030H Brassica oleracea HOM05D000113 ORTHO05D005496 7.3e-28 127.1 72 83.3
A03p04500 Brassica napus HOM05D000113 ORTHO05D005496 9.5e-28 126.7 86 72.1
BcaB01g05540 Brassica carinata HOM05D000113 ORTHO05D005496 6.8e-26 120.6 81 72.8
BcaNung06254 Brassica carinata HOM05D000113 ORTHO05D091226 6.8e-26 120.6 63 92.1
BcaB06g26897 Brassica carinata HOM05D000113 ORTHO05D005496 5.8e-25 117.5 66 86.4
Sp6g33080 Schrenkiella parvula HOM05D000113 ORTHO05D005496 2.4e-23 112.1 72 69.4
BcaC04g19309 Brassica carinata HOM05D000113 ORTHO05D005496 2.1e-19 99.0 73 65.8
C09p67040 Brassica napus HOM05D000113 ORTHO05D005496 2.1e-19 99.0 73 65.8
BolC9t59477H Brassica oleracea HOM05D000113 ORTHO05D005496 2.1e-19 99.0 73 65.8
Carub.0006s0884 Capsella rubella HOM05D000113 ORTHO05D005496 1.1e-18 96.7 75 60.0
AL6G20870 Arabidopsis lyrata HOM05D000113 ORTHO05D005496 1.8e-18 95.9 84 51.2
BcaB08g37113 Brassica carinata HOM05D000113 ORTHO05D005496 6.8e-18 94.0 76 61.8
A10p27230 Brassica napus HOM05D000113 ORTHO05D005496 1.5e-17 92.8 73 60.3
BraA10t44773Z Brassica rapa HOM05D000113 ORTHO05D005496 1.5e-17 92.8 73 60.3
Thhalv10012419m.g Eutrema salsugineum HOM05D000113 ORTHO05D005496 2.6e-17 92.0 75 54.7
CARHR202930 Cardamine hirsuta HOM05D000113 ORTHO05D005496 2.2e-16 89.0 75 54.7
Aa31LG3G16810 Aethionema arabicum HOM05D000113 ORTHO05D005496 1.9e-15 85.9 84 48.8
THA.LOC104798664 Tarenaya hassleriana HOM05D000113 ORTHO05D005496 5.4e-15 84.3 75 49.3
AT5G10370 Arabidopsis thaliana HOM05D000113 ORTHO05D005496 9.2e-15 83.6 82 47.6
AT4G01020 Arabidopsis thaliana HOM05D000113 ORTHO05D005496 2.7e-14 82.0 82 46.3
Cc07_g14540 Coffea canephora HOM05D000113 ORTHO05D005496 4.4e-09 64.7 71 42.3
Dinv08866 Davidia involucrata HOM05D000113 ORTHO05D005496 6.4e-08 60.8 71 40.8
Nn5g29734 Nelumbo nucifera HOM05D000113 ORTHO05D005496 6.4e-08 60.8 71 42.3
Dinv24167 Davidia involucrata HOM05D000113 ORTHO05D005496 2.4e-07 58.9 71 38.0
Duzib264G0979 Durio zibethinus HOM05D000113 ORTHO05D005496 3.2e-07 58.5 71 39.4
Eucgr.H04740 Eucalyptus grandis HOM05D000113 ORTHO05D005496 9.3e-07 57.0 71 39.4
QL06p047959 Quercus lobata HOM05D000113 ORTHO05D005496 2.1e-06 55.8 71 38.0
Hund14100 Selenicereus undatus HOM05D000113 ORTHO05D005496 2.1e-06 55.8 68 41.2
SGA_v2.0_scaffold421G51436 Striga asiatica HOM05D000113 ORTHO05D005496 2.7e-06 55.5 72 40.3
SGA_v2.0_scaffold108G30899 Striga asiatica HOM05D000113 ORTHO05D005496 4.6e-06 54.7 72 40.3
MBI06_g03318_MAGBIO Magnolia biondii HOM05D000113 ORTHO05D005496 6.0e-06 54.3 63 36.5
Sed0023847 Sechium edule HOM05D000113 ORTHO05D005496 7.8e-06 53.9 71 36.6


User provided reference genes

Program Settings