Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB06g26188 Brassica carinata HOM05D005249 ORTHO05D006457 1.5e-75 286.2 151 100.0
A06p02830 Brassica napus HOM05D005249 ORTHO05D006457 3.1e-57 225.3 178 73.6
BraA06t23490Z Brassica rapa HOM05D005249 ORTHO05D006457 3.1e-57 225.3 178 73.6
BcaC08g43263 Brassica carinata HOM05D005249 ORTHO05D006457 1.7e-55 219.5 178 71.3
C06p06070 Brassica napus HOM05D005249 ORTHO05D006457 1.7e-55 219.5 178 71.3
BolC6t35720H Brassica oleracea HOM05D005249 ORTHO05D006457 1.7e-55 219.5 178 71.3
BcaB07g33531 Brassica carinata HOM05D005249 ORTHO05D006457 4.9e-55 218.0 178 71.9
Sp1g37640 Schrenkiella parvula HOM05D005249 ORTHO05D006457 1.2e-53 213.4 179 72.1
A05p19870 Brassica napus HOM05D005249 ORTHO05D006457 2.1e-53 212.6 178 70.8
BraA05t20892Z Brassica rapa HOM05D005249 ORTHO05D006457 2.1e-53 212.6 178 70.8
Thhalv10011819m.g Eutrema salsugineum HOM05D005249 ORTHO05D006457 2.1e-53 212.6 178 70.8
AT1G50900 Arabidopsis thaliana HOM05D005249 ORTHO05D006457 5.1e-52 208.0 178 69.7
AL8G37450 Arabidopsis lyrata HOM05D005249 ORTHO05D006457 2.1e-50 202.6 178 66.3
AL1G58630 Arabidopsis lyrata HOM05D005249 ORTHO05D006457 4.8e-50 201.4 181 66.3
Carub.0001s3985 Capsella rubella HOM05D005249 ORTHO05D006457 1.8e-49 199.5 179 67.6
C05p33210 Brassica napus HOM05D005249 ORTHO05D006457 2.2e-47 192.6 165 68.5
BcaB02g11192 Brassica carinata HOM05D005249 ORTHO05D006457 7.4e-43 177.6 182 62.1
Aa31LG10G3330 Aethionema arabicum HOM05D005249 ORTHO05D006457 1.6e-42 176.4 174 62.6
BcaB07g33530 Brassica carinata HOM05D005249 ORTHO05D006457 1.6e-42 176.4 152 69.1
Thhalv10021639m.g Eutrema salsugineum HOM05D005249 ORTHO05D006457 7.6e-40 167.5 178 60.7
BolC5t33095H Brassica oleracea HOM05D005249 ORTHO05D006457 1.0e-39 167.2 181 61.3
Cpa.g.sc97.36 Carica papaya HOM05D005249 ORTHO05D006457 3.8e-39 165.2 175 58.3
A05p28310 Brassica napus HOM05D005249 ORTHO05D006457 1.1e-38 163.7 180 60.6
BraA05t21713Z Brassica rapa HOM05D005249 ORTHO05D006457 1.1e-38 163.7 180 60.6
C05p43800 Brassica napus HOM05D005249 ORTHO05D006457 5.5e-38 161.4 182 59.3
Sp3g18550 Schrenkiella parvula HOM05D005249 ORTHO05D006457 5.5e-38 161.4 178 58.4
Ciclev10009689m.g Citrus clementina HOM05D005249 ORTHO05D006457 7.2e-38 161.0 161 59.6
Thecc.07G044000 Theobroma cacao HOM05D005249 ORTHO05D006457 1.2e-37 160.2 162 56.8
TWI38G0945 Tripterygium wilfordii HOM05D005249 ORTHO05D006457 1.2e-37 160.2 161 57.8
Gohir.A01G077300 Gossypium hirsutum HOM05D005249 ORTHO05D006457 2.7e-37 159.1 162 57.4
THA.LOC104798778 Tarenaya hassleriana HOM05D005249 ORTHO05D006457 2.7e-37 159.1 177 57.1
CARHR040950 Cardamine hirsuta HOM05D005249 ORTHO05D006457 4.6e-37 158.3 90 88.9
Gohir.D05G366500 Gossypium hirsutum HOM05D005249 ORTHO05D006457 1.0e-36 157.1 162 56.2
Gohir.D01G064800 Gossypium hirsutum HOM05D005249 ORTHO05D006457 1.3e-36 156.8 162 56.2
Gorai.002G085700 Gossypium raimondii HOM05D005249 ORTHO05D006457 1.3e-36 156.8 162 56.2
Manes.03G127000 Manihot esculenta HOM05D005249 ORTHO05D006457 1.3e-36 156.8 170 57.6
RcHm_v2.0_Chr5g0038151 Rosa chinensis HOM05D005249 ORTHO05D006457 1.1e-35 153.7 175 53.7
Duzib213G0461 Durio zibethinus HOM05D005249 ORTHO05D006457 1.5e-35 153.3 162 56.2
COL.COLO4_09631 Corchorus olitorius HOM05D005249 ORTHO05D006457 3.3e-35 152.1 162 56.2
Carub.0003s2051 Capsella rubella HOM05D005249 ORTHO05D006457 4.3e-35 151.8 180 58.9
Eucgr.F03446 Eucalyptus grandis HOM05D005249 ORTHO05D006457 5.7e-35 151.4 175 54.3
MD03G1207700 Malus domestica HOM05D005249 ORTHO05D006457 1.6e-34 149.8 155 55.5
FvH4_3g22190 Fragaria vesca HOM05D005249 ORTHO05D006457 2.8e-34 149.1 175 52.6
Haze_09646 Corylus avellana HOM05D005249 ORTHO05D006457 4.8e-34 148.3 157 54.8
Aqoxy1G03622 Aquilegia oxysepala HOM05D005249 ORTHO05D006457 6.3e-34 147.9 173 52.0
Cfa020386 Carpinus fangiana HOM05D005249 ORTHO05D006457 6.3e-34 147.9 157 54.8
GSVIVG01002001001 Vitis vinifera HOM05D005249 ORTHO05D006457 6.3e-34 147.9 171 52.6
Dinv22281 Davidia involucrata HOM05D005249 ORTHO05D006457 1.1e-33 147.1 168 53.0
Manes.15G073900 Manihot esculenta HOM05D005249 ORTHO05D006457 1.1e-33 147.1 168 54.2
CARHR096310 Cardamine hirsuta HOM05D005249 ORTHO05D006457 1.4e-33 146.7 88 86.4
CsaV3_3G005280 Cucumis sativus L. HOM05D005249 ORTHO05D006457 1.4e-33 146.7 168 53.0
Prupe.4G209000 Prunus persica HOM05D005249 ORTHO05D006457 1.4e-33 146.7 175 50.3
MELO3C025397.2 Cucumis melo HOM05D005249 ORTHO05D006457 1.8e-33 146.4 168 53.0
FAN11G3900 Fragaria x ananassa HOM05D005249 ORTHO05D006340 2.4e-33 146.0 98 74.5
Gohir.A04G019300 Gossypium hirsutum HOM05D005249 ORTHO05D006457 2.4e-33 146.0 166 53.0
Potri.001G420900 Populus trichocarpa HOM05D005249 ORTHO05D006457 2.4e-33 146.0 159 56.6
Hma1.2p1_1271F.1_g271820 Hydrangea macrophylla HOM05D005249 ORTHO05D006457 4.1e-33 145.2 165 52.1
Hma1.2p1_1609F.1_g293423 Hydrangea macrophylla HOM05D005249 ORTHO05D006457 4.1e-33 145.2 165 52.1
ClCG10G005560 Citrullus lanatus HOM05D005249 ORTHO05D006457 5.3e-33 144.8 168 51.2
Lj8A167T50 Lonicera japonica HOM05D005249 ORTHO05D006457 5.3e-33 144.8 168 53.0
Atru.chr2.3277 Acer truncatum HOM05D005249 ORTHO05D006457 2.0e-32 142.9 87 81.6
Sabra16G0285800 Salix brachista HOM05D005249 ORTHO05D006457 2.0e-32 142.9 146 56.8
QL08p011891 Quercus lobata HOM05D005249 ORTHO05D006457 2.6e-32 142.5 170 50.6
QL08p012062 Quercus lobata HOM05D005249 ORTHO05D006457 2.6e-32 142.5 170 50.6
FAN16G3206 Fragaria x ananassa HOM05D005249 ORTHO05D006340 5.9e-32 141.4 98 71.4
Nitab4.5_0001393g0170 Nicotiana tabacum HOM05D005249 ORTHO05D006457 1.3e-31 140.2 162 55.6
Peaxi162Scf00387g00046 Petunia axillaris HOM05D005249 ORTHO05D006457 1.3e-31 140.2 174 52.9
CSS0021065 Camellia sinensis var. sinensis HOM05D005249 ORTHO05D006457 1.7e-31 139.8 180 48.9
Migut.M01785 Erythranthe guttata HOM05D005249 ORTHO05D006457 1.7e-31 139.8 87 79.3
HanXRQChr05g0159111 Helianthus annuus HOM05D005249 ORTHO05D006457 3.8e-31 138.7 165 52.7
Nitab4.5_0005048g0030 Nicotiana tabacum HOM05D005249 ORTHO05D006457 3.8e-31 138.7 180 52.8
CANSAT21G2135 Cannabis sativa HOM05D005249 ORTHO05D006457 5.0e-31 138.3 178 50.0
PGR031G1044 Punica granatum HOM05D005249 ORTHO05D006457 6.5e-31 137.9 174 51.1
Sed0007548 Sechium edule HOM05D005249 ORTHO05D006457 6.5e-31 137.9 169 51.5
CiPaw.11G187100 Carya illinoinensis HOM05D005249 ORTHO05D006457 1.1e-30 137.1 175 51.4
Phvul.006G038600 Phaseolus vulgaris HOM05D005249 ORTHO05D006457 1.1e-30 137.1 172 50.0
Gorai.009G425200 Gossypium raimondii HOM05D005249 ORTHO05D006457 1.4e-30 136.7 86 79.1
PGSC0003DMG400014394 Solanum tuberosum HOM05D005249 ORTHO05D006457 1.4e-30 136.7 173 50.3
TAR626G0063 Trochodendron aralioides HOM05D005249 ORTHO05D006457 1.9e-30 136.3 177 48.6
Lsat_1_v5_gn_5_5181 Lactuca sativa HOM05D005249 ORTHO05D006457 2.5e-30 136.0 164 50.6
Glyma.18G102100 Glycine max HOM05D005249 ORTHO05D006457 3.2e-30 135.6 181 50.3
AUR62015702 Chenopodium quinoa HOM05D005249 ORTHO05D006457 4.2e-30 135.2 172 52.9
Medtr3g019320 Medicago truncatula HOM05D005249 ORTHO05D006457 4.2e-30 135.2 171 51.5
arahy.Tifrunner.gnm1.ann1.I048YJ Arachis hypogaea HOM05D005249 ORTHO05D006457 5.5e-30 134.8 183 49.7
Rhsim04G0001800 Rhododendron simsii HOM05D005249 ORTHO05D006457 5.5e-30 134.8 183 49.2
Ah.06g182920 Amaranthus hybridus HOM05D005249 ORTHO05D006457 9.4e-30 134.0 177 53.7
Actinidia09913 Actinidia chinensis HOM05D005249 ORTHO05D006457 1.2e-29 133.7 87 77.0
Oeu042920.1 Olea europaea HOM05D005249 ORTHO05D006457 1.6e-29 133.3 87 74.7
TAR624G0120 Trochodendron aralioides HOM05D005249 ORTHO05D006457 1.6e-29 133.3 176 49.4
arahy.Tifrunner.gnm1.ann1.EK5LIC Arachis hypogaea HOM05D005249 ORTHO05D006457 2.1e-29 132.9 185 49.2
Rhsim04G0000700 Rhododendron simsii HOM05D005249 ORTHO05D006457 2.1e-29 132.9 98 69.4
Solyc10g006370.3 Solanum lycopersicum HOM05D005249 ORTHO05D006457 2.1e-29 132.9 173 49.7
ATR0752G229 Amborella trichopoda HOM05D005249 ORTHO05D006457 2.7e-29 132.5 84 77.4
Ca_08298_v3 Cicer arietinum L. HOM05D005249 ORTHO05D006457 2.7e-29 132.5 169 51.5
SGA_v2.0_scaffold258G45797 Striga asiatica HOM05D005249 ORTHO05D006457 2.7e-29 132.5 87 73.6
AUR62020502 Chenopodium quinoa HOM05D005249 ORTHO05D006457 4.6e-29 131.7 173 52.0
Actinidia05108 Actinidia chinensis HOM05D005249 ORTHO05D006457 6.1e-29 131.3 165 51.5
Cc05_g13500 Coffea canephora HOM05D005249 ORTHO05D006457 6.1e-29 131.3 176 48.3
ECA246G1486 Erigeron canadensis HOM05D005249 ORTHO05D006457 6.1e-29 131.3 87 73.6
Lalb_Chr15g0080371 Lupinus albus HOM05D005249 ORTHO05D006457 6.1e-29 131.3 179 50.8
Sopen10g002320 Solanum pennellii HOM05D005249 ORTHO05D006457 6.1e-29 131.3 87 73.6
vmacro09735 Vaccinium macrocarpon HOM05D005249 ORTHO05D006457 6.1e-29 131.3 86 76.7
VMungo0540G0590 Vigna mungo HOM05D005249 ORTHO05D006457 6.1e-29 131.3 176 49.4
MBI02_g28338_MAGBIO Magnolia biondii HOM05D005249 ORTHO05D006457 7.9e-29 131.0 87 73.6
EL10Ac4g07899 Beta vulgaris HOM05D005249 ORTHO05D006457 1.0e-28 130.6 171 51.5
Psat5g216840 Pisum sativum HOM05D005249 ORTHO05D006457 1.0e-28 130.6 170 50.0
Glyma.08G312800 Glycine max HOM05D005249 ORTHO05D006457 1.8e-28 129.8 188 49.5
MSTRG.15162 Avicennia marina HOM05D005249 ORTHO05D006457 5.1e-28 128.3 164 51.2
Sc16g0006280 Simmondsia chinensis HOM05D005249 ORTHO05D006457 5.1e-28 128.3 87 75.9
FAN21G3293 Fragaria x ananassa HOM05D005249 ORTHO05D006457 6.7e-28 127.9 82 78.0
CDE05G2685 Ceratophyllum demersum HOM05D005249 ORTHO05D006457 1.1e-27 127.1 82 73.2
Zm00001eb322850 Zea mays HOM05D005249 ORTHO05D006457 1.5e-27 126.7 87 74.7
CAN.G1781.9 Capsicum annuum HOM05D005249 ORTHO05D006457 2.0e-27 126.3 87 71.3
CDE02G4799 Ceratophyllum demersum HOM05D005249 ORTHO05D006457 2.0e-27 126.3 81 74.1
Lj6g0004310 Lotus japonicus HOM05D005249 ORTHO05D006457 2.0e-27 126.3 174 48.9
PSO210G5271 Papaver somniferum HOM05D005249 ORTHO05D006457 2.6e-27 125.9 182 46.7
unitig_578.g16003 Utricularia gibba HOM05D005249 ORTHO05D006457 5.7e-27 124.8 177 46.9
PSO832G4498 Papaver somniferum HOM05D005249 ORTHO05D006457 9.7e-27 124.0 184 45.7
Os07g0520800 Oryza sativa ssp. japonica HOM05D005249 ORTHO05D006457 1.3e-26 123.6 82 75.6
SMO137G0373 Selaginella moellendorffii HOM05D005249 ORTHO05D006457 2.2e-26 122.9 81 72.8
CDE05G0273 Ceratophyllum demersum HOM05D005249 ORTHO05D006457 2.8e-26 122.5 87 66.7
HPP92_017607 Vanilla planifolia HOM05D005249 ORTHO05D006457 6.3e-26 121.3 87 70.1
Oeu062605.1 Olea europaea HOM05D005249 ORTHO05D006457 8.2e-26 120.9 183 44.3
Cfa020388 Carpinus fangiana HOM05D005249 ORTHO05D006457 1.1e-25 120.6 82 72.0
CDE11G0574 Ceratophyllum demersum HOM05D005249 ORTHO05D006457 1.8e-25 119.8 87 65.5
Nn1g07102 Nelumbo nucifera HOM05D005249 ORTHO05D006457 1.5e-24 116.7 179 45.3
TPR.G3850 Trifolium pratense HOM05D005249 ORTHO05D006457 3.4e-24 115.5 82 73.2
SEGI_08050 Sequoiadendron giganteum HOM05D005249 ORTHO05D006457 5.9e-24 114.8 81 69.1
CBR_g12744 Chara braunii HOM05D005249 ORTHO05D006457 1.7e-23 113.2 79 70.9
Glyma.09G102000 Glycine max HOM05D005249 ORTHO05D006457 1.6e-21 106.7 88 62.5
Dinv40734 Davidia involucrata HOM05D005249 ORTHO05D006457 6.7e-20 101.3 147 47.6
Pp3c5_16520 Physcomitrium patens HOM05D005249 ORTHO05D006457 6.7e-20 101.3 78 66.7
BcaC05g27382 Brassica carinata HOM05D005249 ORTHO05D006457 1.6e-16 90.1 54 87.0
Cre12.g551950 Chlamydomonas reinhardtii HOM05D005249 ORTHO05D006457 1.0e-15 87.4 78 51.3
Atru.chr2.3276 Acer truncatum HOM05D005249 ORTHO05D006457 6.5e-15 84.7 54 77.8
Mapoly0006s0110 Marchantia polymorpha HOM05D005249 ORTHO05D006457 6.5e-15 84.7 87 55.2
PRCOL_00000858 Prasinoderma coloniale HOM05D005249 ORTHO05D006457 6.5e-15 84.7 77 50.6
MCO16G329 Micromonas commoda HOM05D005249 ORTHO05D006457 3.2e-14 82.4 70 55.7
BcaC05g27384 Brassica carinata HOM05D005249 ORTHO05D006457 1.8e-12 76.6 58 75.9
CARHR040940 Cardamine hirsuta HOM05D005249 ORTHO05D006457 2.8e-10 69.3 57 75.4
CBR_g602 Chara braunii HOM05D005249 ORTHO05D006457 7.0e-09 64.7 63 47.6
Pp3c6_9300 Physcomitrium patens HOM05D005249 ORTHO05D006457 5.5e-06 55.1 54 48.1


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