Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g24849 Brassica carinata HOM05D002388 ORTHO05D008833 2.0e-113 412.5 219 100.0
Sp5g29510 Schrenkiella parvula HOM05D003614 ORTHO05D004156 2.4e-18 96.7 266 34.6
Aa31LG4G4590 Aethionema arabicum HOM05D002388 ORTHO05D008833 4.1e-18 95.9 50 100.0
BcaC08g46864 Brassica carinata HOM05D002388 ORTHO05D008833 4.1e-18 95.9 50 100.0
A02p19260 Brassica napus HOM05D002388 ORTHO05D008833 4.1e-18 95.9 50 100.0
BolC2t09212H Brassica oleracea HOM05D002388 ORTHO05D008833 4.1e-18 95.9 50 100.0
BolC6t39879H Brassica oleracea HOM05D002388 ORTHO05D008833 4.1e-18 95.9 50 100.0
BraA07t31559Z Brassica rapa HOM05D002388 ORTHO05D008833 4.1e-18 95.9 50 100.0
Thhalv10019650m.g Eutrema salsugineum HOM05D002388 ORTHO05D008833 4.1e-18 95.9 50 100.0
Carub.0002s2112 Capsella rubella HOM05D002388 ORTHO05D008833 5.4e-18 95.5 50 98.0
CARHR067600 Cardamine hirsuta HOM05D002388 ORTHO05D008833 5.4e-18 95.5 50 98.0
BraA02t06971Z Brassica rapa HOM05D002388 ORTHO05D008833 9.1e-18 94.7 50 98.0
Sp5g29500 Schrenkiella parvula HOM05D002388 ORTHO05D008833 1.6e-17 94.0 50 98.0
AL2G34200 Arabidopsis lyrata HOM05D003614 ORTHO05D004156 3.5e-17 92.8 50 94.0
AT1G74340 Arabidopsis thaliana HOM05D002388 ORTHO05D008833 3.5e-17 92.8 50 94.0
AT1G74350 Arabidopsis thaliana HOM05D003614 ORTHO05D004156 2.2e-16 90.1 267 33.3
Aa31LG4G4600 Aethionema arabicum HOM05D003614 ORTHO05D004156 8.5e-16 88.2 272 32.7
Actinidia14785 Actinidia chinensis HOM05D002388 ORTHO05D008833 1.1e-15 87.8 50 88.0
ClCG10G001370 Citrullus lanatus HOM05D002388 ORTHO05D008833 1.1e-15 87.8 56 78.6
BraA07t31560Z Brassica rapa HOM05D003614 ORTHO05D004156 3.2e-15 86.3 267 32.2
A07p40160 Brassica napus HOM05D003614 ORTHO05D004156 5.5e-15 85.5 267 32.2
C06p48510 Brassica napus HOM05D003614 ORTHO05D004156 5.5e-15 85.5 267 31.5
SalBow6G3465 Salvia bowleyana HOM05D002388 ORTHO05D008833 5.5e-15 85.5 50 84.0
Sed0013912 Sechium edule HOM05D002388 ORTHO05D008833 7.2e-15 85.1 50 82.0
Cpa.g.sc13.304 Carica papaya HOM05D002388 ORTHO05D008833 9.5e-15 84.7 50 84.0
THA.LOC104804589 Tarenaya hassleriana HOM05D002388 ORTHO05D008833 9.5e-15 84.7 50 84.0
BolC6t39880H Brassica oleracea HOM05D003614 ORTHO05D004156 1.6e-14 84.0 267 31.1
BcaC08g46865 Brassica carinata HOM05D003614 ORTHO05D004156 2.1e-14 83.6 255 34.1
AUR62007344 Chenopodium quinoa HOM05D002388 ORTHO05D008833 2.1e-14 83.6 50 84.0
AUR62018655 Chenopodium quinoa HOM05D002388 ORTHO05D008833 2.1e-14 83.6 50 84.0
CsaV3_3G001440 Cucumis sativus L. HOM05D002388 ORTHO05D008833 2.1e-14 83.6 50 82.0
Hund14364 Selenicereus undatus HOM05D002388 ORTHO05D008833 2.1e-14 83.6 50 84.0
TAR375G0363 Trochodendron aralioides HOM05D002388 ORTHO05D008833 2.1e-14 83.6 50 84.0
MELO3C013830.2 Cucumis melo HOM05D002388 ORTHO05D008833 2.8e-14 83.2 50 80.0
DCAR_004281 Daucus carota HOM05D002388 ORTHO05D008833 2.8e-14 83.2 50 82.0
Nitab4.5_0000556g0150 Nicotiana tabacum HOM05D002388 ORTHO05D008833 2.8e-14 83.2 49 81.6
Haze_08171 Corylus avellana HOM05D002388 ORTHO05D008833 3.6e-14 82.8 50 84.0
Hma1.2p1_0870F.1_g230830 Hydrangea macrophylla HOM05D002388 ORTHO05D008833 3.6e-14 82.8 49 79.6
Os02g0140101 Oryza sativa ssp. japonica HOM05D002388 ORTHO05D008833 3.6e-14 82.8 48 83.3
Sabra01G0106900 Salix brachista HOM05D002388 ORTHO05D008833 3.6e-14 82.8 50 82.0
SGA_v2.0_scaffold20G09240 Striga asiatica HOM05D002388 ORTHO05D008833 3.6e-14 82.8 49 79.6
vmacro14193 Vaccinium macrocarpon HOM05D002388 ORTHO05D008833 3.6e-14 82.8 50 82.0
QL12p001301 Quercus lobata HOM05D002388 ORTHO05D008833 4.7e-14 82.4 49 83.7
CiPaw.11G097500 Carya illinoinensis HOM05D002388 ORTHO05D008833 6.1e-14 82.0 50 82.0
Eucgr.D02219 Eucalyptus grandis HOM05D002388 ORTHO05D008833 8.0e-14 81.6 50 80.0
FAN04G1000 Fragaria x ananassa HOM05D002388 ORTHO05D008833 8.0e-14 81.6 50 80.0
FAN18G1485 Fragaria x ananassa HOM05D002388 ORTHO05D008833 8.0e-14 81.6 50 80.0
PSO339G0280 Papaver somniferum HOM05D002388 ORTHO05D008833 8.0e-14 81.6 50 80.0
PSO384G4479 Papaver somniferum HOM05D002388 ORTHO05D008833 8.0e-14 81.6 50 80.0
Potri.001G138100 Populus trichocarpa HOM05D002388 ORTHO05D008833 8.0e-14 81.6 50 80.0
PGR031G2620 Punica granatum HOM05D002388 ORTHO05D008833 8.0e-14 81.6 48 81.2
Nitab4.5_0002778g0070 Nicotiana tabacum HOM05D002388 ORTHO05D008833 1.0e-13 81.3 48 81.2
Solyc08g005210.3 Solanum lycopersicum HOM05D002388 ORTHO05D008833 1.0e-13 81.3 49 81.6
Sopen08g001240 Solanum pennellii HOM05D002388 ORTHO05D008833 1.0e-13 81.3 49 81.6
TPR.G3364 Trifolium pratense HOM05D002388 ORTHO05D008833 1.0e-13 81.3 50 82.0
CAN.G474.16 Capsicum annuum HOM05D002388 ORTHO05D008833 1.4e-13 80.9 49 79.6
Glyma.10G041600 Glycine max HOM05D002388 ORTHO05D008833 1.4e-13 80.9 50 80.0
RcHm_v2.0_Chr7g0211611 Rosa chinensis HOM05D002388 ORTHO05D008833 1.4e-13 80.9 50 80.0
GSVIVG01013070001 Vitis vinifera HOM05D002388 ORTHO05D008833 1.4e-13 80.9 47 83.0
CiPaw.12G067300 Carya illinoinensis HOM05D002388 ORTHO05D008833 1.8e-13 80.5 50 80.0
FAN08G0310 Fragaria x ananassa HOM05D002388 ORTHO05D008833 2.3e-13 80.1 50 76.0
Manes.04G058600 Manihot esculenta HOM05D002388 ORTHO05D008833 2.3e-13 80.1 48 79.2
Medtr8g066600 Medicago truncatula HOM05D002388 ORTHO05D008833 2.3e-13 80.1 50 78.0
TWI81G0136 Tripterygium wilfordii HOM05D002388 ORTHO05D008833 2.3e-13 80.1 50 78.0
Ah.12g055420 Amaranthus hybridus HOM05D002388 ORTHO05D008833 3.0e-13 79.7 50 76.0
Ciclev10003014m.g Citrus clementina HOM05D002388 ORTHO05D008833 3.0e-13 79.7 50 78.0
Migut.A01083 Erythranthe guttata HOM05D002388 ORTHO05D008833 3.0e-13 79.7 50 74.0
Peaxi162Scf00045g00216 Petunia axillaris HOM05D002388 ORTHO05D008833 3.0e-13 79.7 49 77.6
Peaxi162Scf00185g00821 Petunia axillaris HOM05D002388 ORTHO05D008833 3.0e-13 79.7 49 77.6
Prupe.5G029600 Prunus persica HOM05D002388 ORTHO05D008833 3.0e-13 79.7 50 78.0
PGSC0003DMG400043827 Solanum tuberosum HOM05D002388 ORTHO05D008833 3.0e-13 79.7 49 79.6
TWI60G0513 Tripterygium wilfordii HOM05D002388 ORTHO05D008833 3.0e-13 79.7 50 78.0
arahy.Tifrunner.gnm1.ann1.Y11EX9 Arachis hypogaea HOM05D002388 ORTHO05D008833 4.0e-13 79.3 50 76.0
CANSAT21G0073 Cannabis sativa HOM05D002388 ORTHO05D008833 4.0e-13 79.3 50 80.0
COL.COLO4_16958 Corchorus olitorius HOM05D002388 ORTHO05D008833 4.0e-13 79.3 50 82.0
HanXRQChr17g0538091 Helianthus annuus HOM05D002388 ORTHO05D008833 4.0e-13 79.3 50 78.0
Nitab4.5_0000109g0080 Nicotiana tabacum HOM05D002388 ORTHO05D008833 4.0e-13 79.3 49 77.6
Os11g0311550 Oryza sativa ssp. japonica HOM05D002388 ORTHO05D008833 4.0e-13 79.3 48 79.2
MD06G1025500 Malus domestica HOM05D002388 ORTHO05D008833 5.2e-13 79.0 50 76.0
Nitab4.5_0001632g0030 Nicotiana tabacum HOM05D002388 ORTHO05D008833 5.2e-13 79.0 49 77.6
Thecc.03G308600 Theobroma cacao HOM05D002388 ORTHO05D008833 5.2e-13 79.0 50 80.0
CSS0026703 Camellia sinensis var. sinensis HOM05D002388 ORTHO05D008833 6.8e-13 78.6 50 78.0
CSS0033524 Camellia sinensis var. sinensis HOM05D002388 ORTHO05D008833 6.8e-13 78.6 50 78.0
Dinv28991 Davidia involucrata HOM05D002388 ORTHO05D008833 6.8e-13 78.6 50 82.0
Glyma.13G128600 Glycine max HOM05D002388 ORTHO05D008833 6.8e-13 78.6 50 78.0
Nn3g19407 Nelumbo nucifera HOM05D002388 ORTHO05D008833 6.8e-13 78.6 50 82.0
ATR0564G363 Amborella trichopoda HOM05D002388 ORTHO05D008833 8.8e-13 78.2 50 76.0
EL10Ac5g12027 Beta vulgaris HOM05D002388 ORTHO05D008833 8.8e-13 78.2 50 78.0
CAN.G137.4 Capsicum annuum HOM05D002388 ORTHO05D008833 8.8e-13 78.2 49 75.5
ECA246G0855 Erigeron canadensis HOM05D002388 ORTHO05D008833 8.8e-13 78.2 50 76.0
MD16G1280900 Malus domestica HOM05D002388 ORTHO05D008833 1.2e-12 77.8 50 76.0
Solyc06g066400.3 Solanum lycopersicum HOM05D002388 ORTHO05D008833 1.2e-12 77.8 49 75.5
Sopen06g021590 Solanum pennellii HOM05D002388 ORTHO05D008833 1.2e-12 77.8 49 75.5
TAR119G0002 Trochodendron aralioides HOM05D002388 ORTHO05D008833 1.2e-12 77.8 50 80.0
Cc08_g03400 Coffea canephora HOM05D002388 ORTHO05D008833 1.5e-12 77.4 50 76.0
Psat4g122960 Pisum sativum HOM05D002388 ORTHO05D008833 1.5e-12 77.4 50 78.0
CSS0023919 Camellia sinensis var. sinensis HOM05D002388 ORTHO05D008833 2.0e-12 77.0 63 65.1
Gohir.D08G175050 Gossypium hirsutum HOM05D002388 ORTHO05D008833 2.0e-12 77.0 50 78.0
Gorai.004G182800 Gossypium raimondii HOM05D002388 ORTHO05D008833 2.0e-12 77.0 50 78.0
Phvul.003G283500 Phaseolus vulgaris HOM05D002388 ORTHO05D008833 2.0e-12 77.0 50 72.0
Lsat_1_v5_gn_3_19620 Lactuca sativa HOM05D002388 ORTHO05D008833 2.6e-12 76.6 52 76.9
Medtr2g014320 Medicago truncatula HOM05D002388 ORTHO05D008833 3.4e-12 76.3 47 76.6
PGSC0003DMG400016784 Solanum tuberosum HOM05D002388 ORTHO05D008833 3.4e-12 76.3 49 73.5
Lj1g0006191 Lotus japonicus HOM05D002388 ORTHO05D008833 4.4e-12 75.9 50 74.0
Peaxi162Scf00038g00010 Petunia axillaris HOM05D002388 ORTHO05D008833 4.4e-12 75.9 47 74.5
CDE05G0657 Ceratophyllum demersum HOM05D002388 ORTHO05D008833 5.7e-12 75.5 49 69.4
Duzib068G0043 Durio zibethinus HOM05D002388 ORTHO05D008833 7.5e-12 75.1 50 78.0
arahy.Tifrunner.gnm1.ann1.G961TR Arachis hypogaea HOM05D002388 ORTHO05D008833 1.7e-11 73.9 57 63.2
Lalb_Chr05g0225791 Lupinus albus HOM05D002388 ORTHO05D008833 1.7e-11 73.9 50 74.0
PGSC0003DMG400003487 Solanum tuberosum HOM05D002388 ORTHO05D008833 2.2e-11 73.6 47 76.6
CSS0009097 Camellia sinensis var. sinensis HOM05D002388 ORTHO05D008833 2.8e-11 73.2 49 75.5
Duzib205G0142 Durio zibethinus HOM05D002388 ORTHO05D008833 6.3e-11 72.0 50 74.0
CSS0006499 Camellia sinensis var. sinensis HOM05D002388 ORTHO05D008833 1.4e-10 70.9 49 73.5
PGSC0003DMG400016734 Solanum tuberosum HOM05D002388 ORTHO05D008833 3.1e-10 69.7 49 69.4
unitig_32.g10897 Utricularia gibba HOM05D002388 ORTHO05D008833 3.1e-10 69.7 50 66.0
SEGI_36022 Sequoiadendron giganteum HOM05D002388 ORTHO05D008833 7.0e-10 68.6 50 64.0
THA.LOC104808763 Tarenaya hassleriana HOM05D002388 ORTHO05D008833 1.2e-09 67.8 45 75.6
Peaxi162Scf00218g02111 Petunia axillaris HOM05D004298 ORTHO05D008833 1.6e-09 67.4 75 49.3
Mapoly0067s0029 Marchantia polymorpha HOM05D002388 ORTHO05D008833 6.6e-08 62.0 49 57.1
AagrBONN_evm.TU.Sc2ySwM_228.4391 Anthoceros agrestis HOM05D003123 ORTHO05D003492 9.5e-07 58.2 45 55.6
Pp3c22_2990 Physcomitrium patens HOM05D002388 ORTHO05D008833 4.7e-06 55.8 49 53.1


User provided reference genes

Program Settings