Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g24559 Brassica carinata HOM05D000732 ORTHO05D091305 1.3e-108 396.4 201 100.0
Sp5g25460 Schrenkiella parvula HOM05D000732 ORTHO05D007225 2.4e-25 119.8 132 59.1
Carub.0002s1703 Capsella rubella HOM05D000732 ORTHO05D007225 4.2e-25 119.0 135 58.5
AT1G70340 Arabidopsis thaliana HOM05D000732 ORTHO05D007225 1.6e-24 117.1 136 57.4
AL2G29650 Arabidopsis lyrata HOM05D000732 ORTHO05D007225 3.5e-24 115.9 135 57.8
CARHR063520 Cardamine hirsuta HOM05D000732 ORTHO05D007225 2.8e-21 106.3 123 54.5
BcaB03g11954 Brassica carinata HOM05D000732 ORTHO05D007225 1.1e-12 77.8 128 46.9
THA.LOC104808945 Tarenaya hassleriana HOM05D000732 ORTHO05D007225 1.1e-12 77.8 128 45.3
CARHR024210 Cardamine hirsuta HOM05D000732 ORTHO05D007225 3.1e-12 76.3 121 47.9
Aa31LG7G7670 Aethionema arabicum HOM05D000732 ORTHO05D007225 9.0e-12 74.7 123 43.1
AL1G37550 Arabidopsis lyrata HOM05D000732 ORTHO05D007225 1.1e-09 67.8 125 42.4
BcaC05g26291 Brassica carinata HOM05D000732 ORTHO05D007225 1.4e-09 67.4 128 40.6
BolC5t30996H Brassica oleracea HOM05D000732 ORTHO05D007225 1.4e-09 67.4 128 40.6
Aa31LG4G10600 Aethionema arabicum HOM05D000732 ORTHO05D007225 2.4e-09 66.6 139 40.3
AT1G23790 Arabidopsis thaliana HOM05D000732 ORTHO05D007225 4.2e-09 65.9 125 41.6
C08p22100 Brassica napus HOM05D000732 ORTHO05D007225 5.4e-09 65.5 129 40.3
BolC8t49855H Brassica oleracea HOM05D000732 ORTHO05D007225 5.4e-09 65.5 129 40.3
Thhalv10007309m.g Eutrema salsugineum HOM05D000732 ORTHO05D007225 9.3e-09 64.7 127 41.7
Carub.0001s2330 Capsella rubella HOM05D000732 ORTHO05D007225 4.6e-08 62.4 126 41.3
Sc11g0001190 Simmondsia chinensis HOM05D000732 ORTHO05D007225 3.9e-07 59.3 60 51.7
DCAR_031102 Daucus carota HOM05D000732 ORTHO05D007225 5.1e-07 58.9 54 59.3
vmacro16252 Vaccinium macrocarpon HOM05D000732 ORTHO05D007225 5.1e-07 58.9 78 43.6
MD13G1091800 Malus domestica HOM05D000732 ORTHO05D007225 6.7e-07 58.5 54 51.9
MD16G1092400 Malus domestica HOM05D000732 ORTHO05D007225 6.7e-07 58.5 50 56.0
Potri.008G192300 Populus trichocarpa HOM05D000732 ORTHO05D007225 8.7e-07 58.2 49 59.2
Sabra08G0145800 Salix brachista HOM05D000732 ORTHO05D007225 8.7e-07 58.2 49 59.2
Atru.chr11.2022 Acer truncatum HOM05D000732 ORTHO05D007225 1.1e-06 57.8 49 59.2
Cpa.g.sc69.30 Carica papaya HOM05D000732 ORTHO05D007225 1.5e-06 57.4 50 56.0
Eucgr.B03344 Eucalyptus grandis HOM05D000732 ORTHO05D007225 1.5e-06 57.4 49 59.2
Lj2g0021682 Lotus japonicus HOM05D000732 ORTHO05D007225 1.5e-06 57.4 48 58.3
Nitab4.5_0002494g0010 Nicotiana tabacum HOM05D000732 ORTHO05D007225 1.5e-06 57.4 50 56.0
Nitab4.5_0004308g0060 Nicotiana tabacum HOM05D000732 ORTHO05D007225 1.5e-06 57.4 50 56.0
Solyc05g005580.3 Solanum lycopersicum HOM05D000732 ORTHO05D007225 1.5e-06 57.4 50 56.0
Sopen05g001590 Solanum pennellii HOM05D000392 ORTHO05D000001 1.5e-06 57.4 50 56.0
PGSC0003DMG400030993 Solanum tuberosum HOM05D000732 ORTHO05D007225 1.5e-06 57.4 50 56.0
COL.COLO4_36966 Corchorus olitorius HOM05D000732 ORTHO05D007225 1.9e-06 57.0 54 53.7
Prupe.1G254000 Prunus persica HOM05D000732 ORTHO05D007225 1.9e-06 57.0 49 57.1
Sabra10G0027600 Salix brachista HOM05D000732 ORTHO05D007225 1.9e-06 57.0 49 57.1
TWI36G1131 Tripterygium wilfordii HOM05D000732 ORTHO05D007225 1.9e-06 57.0 49 59.2
GSVIVG01020241001 Vitis vinifera HOM05D000732 ORTHO05D007225 1.9e-06 57.0 49 59.2
AUR62005377 Chenopodium quinoa HOM05D000732 ORTHO05D007225 2.5e-06 56.6 49 57.1
Ciclev10031068m.g Citrus clementina HOM05D000732 ORTHO05D007225 2.5e-06 56.6 54 53.7
MBI16_g26454_MAGBIO Magnolia biondii HOM05D000732 ORTHO05D007225 2.5e-06 56.6 49 59.2
Nitab4.5_0000113g0290 Nicotiana tabacum HOM05D000732 ORTHO05D007225 2.5e-06 56.6 48 58.3
Oeu056733.2 Olea europaea HOM05D000732 ORTHO05D007225 2.5e-06 56.6 54 53.7
TWI75G0496 Tripterygium wilfordii HOM05D000732 ORTHO05D007225 2.5e-06 56.6 49 57.1
MSTRG.7899 Avicennia marina HOM05D000732 ORTHO05D007225 3.3e-06 56.2 49 55.1
CAN.G388.57 Capsicum annuum HOM05D000732 ORTHO05D007225 3.3e-06 56.2 49 57.1
AUR62014040 Chenopodium quinoa HOM05D000732 ORTHO05D007225 3.3e-06 56.2 49 57.1
Duzib268G1676 Durio zibethinus HOM05D000732 ORTHO05D007225 3.3e-06 56.2 54 55.6
Manes.12G029000 Manihot esculenta HOM05D000732 ORTHO05D007225 3.3e-06 56.2 46 60.9
Rhsim12G0120000 Rhododendron simsii HOM05D000732 ORTHO05D007225 3.3e-06 56.2 78 42.3
RhsimUnG0193300 Rhododendron simsii HOM05D000732 ORTHO05D007225 3.3e-06 56.2 78 42.3
RcHm_v2.0_Chr4g0443831 Rosa chinensis HOM05D000732 ORTHO05D007225 3.3e-06 56.2 46 58.7
Sp1g21170 Schrenkiella parvula HOM05D000732 ORTHO05D007225 3.3e-06 56.2 49 55.1
SGA_v2.0_scaffold165G38244 Striga asiatica HOM05D000732 ORTHO05D007225 3.3e-06 56.2 40 67.5
Actinidia15046 Actinidia chinensis HOM05D000732 ORTHO05D007225 4.3e-06 55.8 49 55.1
Ah.02g129920 Amaranthus hybridus HOM05D000732 ORTHO05D007225 4.3e-06 55.8 50 56.0
CSS0045437 Camellia sinensis var. sinensis HOM05D000732 ORTHO05D007225 4.3e-06 55.8 49 55.1
Haze_12177 Corylus avellana HOM05D000732 ORTHO05D007225 4.3e-06 55.8 46 60.9
Dinv15302 Davidia involucrata HOM05D000732 ORTHO05D007225 4.3e-06 55.8 40 70.0
Glyma.02G034500 Glycine max HOM05D000732 ORTHO05D007225 4.3e-06 55.8 40 65.0
Peaxi162Scf00338g00223 Petunia axillaris HOM05D000732 ORTHO05D007225 4.3e-06 55.8 49 55.1
TAR371G0352 Trochodendron aralioides HOM05D000732 ORTHO05D007225 4.3e-06 55.8 44 61.4
CANSAT01G2807 Cannabis sativa HOM05D000732 ORTHO05D007225 5.6e-06 55.5 40 67.5
Glyma.01G031300 Glycine max HOM05D000732 ORTHO05D007225 5.6e-06 55.5 40 65.0
Gohir.A03G140000 Gossypium hirsutum HOM05D000732 ORTHO05D007225 5.6e-06 55.5 49 55.1
Gohir.D02G162800 Gossypium hirsutum HOM05D000732 ORTHO05D007225 5.6e-06 55.5 49 55.1
Gorai.005G182800 Gossypium raimondii HOM05D000732 ORTHO05D007225 5.6e-06 55.5 49 55.1
Lj3C1052T10 Lonicera japonica HOM05D000732 ORTHO05D007225 5.6e-06 55.5 49 55.1
QL08p001512 Quercus lobata HOM05D000732 ORTHO05D007225 5.6e-06 55.5 46 60.9
Hund05994 Selenicereus undatus HOM05D000732 ORTHO05D007225 5.6e-06 55.5 50 54.0
Thecc.02G248500 Theobroma cacao HOM05D000732 ORTHO05D007225 5.6e-06 55.5 49 55.1
arahy.Tifrunner.gnm1.ann1.V0668Y Arachis hypogaea HOM05D000732 ORTHO05D007225 7.4e-06 55.1 40 65.0
Hma1.2p1_0867F.1_g230180 Hydrangea macrophylla HOM05D000732 ORTHO05D007225 7.4e-06 55.1 49 57.1
PSO063G5642 Papaver somniferum HOM05D000732 ORTHO05D007225 7.4e-06 55.1 40 67.5
PSO832G2552 Papaver somniferum HOM05D000732 ORTHO05D007225 7.4e-06 55.1 40 67.5
SalBow2G2423 Salvia bowleyana HOM05D000732 ORTHO05D007225 7.4e-06 55.1 49 53.1
VMungo1215G1082 Vigna mungo HOM05D000732 ORTHO05D007225 7.4e-06 55.1 47 55.3
Actinidia13509 Actinidia chinensis HOM05D000732 ORTHO05D007225 9.6e-06 54.7 49 53.1
Cfa009143 Carpinus fangiana HOM05D000732 ORTHO05D007225 9.6e-06 54.7 40 65.0
Dinv24859 Davidia involucrata HOM05D000732 ORTHO05D007225 9.6e-06 54.7 49 57.1
Lalb_Chr05g0216901 Lupinus albus HOM05D000732 ORTHO05D007225 9.6e-06 54.7 49 57.1
Phvul.002G071800 Phaseolus vulgaris HOM05D000732 ORTHO05D007225 9.6e-06 54.7 47 55.3
TAR680G0005 Trochodendron aralioides HOM05D000732 ORTHO05D007225 9.6e-06 54.7 40 65.0
TAR680G0006 Trochodendron aralioides HOM05D000732 ORTHO05D007225 9.6e-06 54.7 40 65.0


User provided reference genes

Program Settings