Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g23679 Brassica carinata HOM05D055949 ORTHO05D096130 4.0e-87 324.7 160 100.0
BcaC07g42574 Brassica carinata HOM05D055949 ORTHO05D017524 2.2e-29 132.9 79 86.1
BcaB01g01457 Brassica carinata HOM05D000144 ORTHO05D017524 3.3e-17 92.4 57 77.2
BcaB06g27703 Brassica carinata HOM05D000144 ORTHO05D017524 3.8e-13 79.0 54 72.2
AT3G62030 Arabidopsis thaliana HOM05D000144 ORTHO05D000392 3.9e-10 68.9 50 68.0
AL5G44680 Arabidopsis lyrata HOM05D000144 ORTHO05D000392 5.1e-10 68.6 50 68.0
C08p37000 Brassica napus HOM05D000144 ORTHO05D000392 5.1e-10 68.6 50 68.0
BolC8t51277H Brassica oleracea HOM05D000144 ORTHO05D000392 5.1e-10 68.6 50 68.0
BcaC02g10276 Brassica carinata HOM05D000144 ORTHO05D000392 2.5e-09 66.2 50 66.0
A04p00740 Brassica napus HOM05D000144 ORTHO05D000392 2.5e-09 66.2 50 66.0
C04p30860 Brassica napus HOM05D000144 ORTHO05D000392 2.5e-09 66.2 50 66.0
BolC4t24608H Brassica oleracea HOM05D000144 ORTHO05D000392 2.5e-09 66.2 50 66.0
BraA04t15795Z Brassica rapa HOM05D000144 ORTHO05D000392 2.5e-09 66.2 50 66.0
Carub.0005s2879 Capsella rubella HOM05D000144 ORTHO05D000392 2.5e-09 66.2 50 66.0
A09p54120 Brassica napus HOM05D000144 ORTHO05D000392 7.4e-09 64.7 50 64.0
BraA09t40826Z Brassica rapa HOM05D000144 ORTHO05D000392 7.4e-09 64.7 50 64.0
Thhalv10006185m.g Eutrema salsugineum HOM05D000144 ORTHO05D000392 9.7e-09 64.3 50 64.0
Sp5g01330 Schrenkiella parvula HOM05D000144 ORTHO05D000392 9.7e-09 64.3 50 64.0
CARHR172380 Cardamine hirsuta HOM05D000144 ORTHO05D000392 8.2e-08 61.2 50 60.0
BcaB02g08127 Brassica carinata HOM05D000144 ORTHO05D000392 4.1e-07 58.9 50 60.0
Medtr7g110980 Medicago truncatula HOM05D000144 ORTHO05D000392 7.7e-06 54.7 43 58.1


User provided reference genes

Program Settings