Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g23462 Brassica carinata HOM05D001038 ORTHO05D091267 4.5e-92 341.3 175 100.0
BcaB01g01825 Brassica carinata HOM05D001038 ORTHO05D000395 1.1e-34 150.6 136 64.7
BcaC05g24336 Brassica carinata HOM05D001038 ORTHO05D016776 3.1e-24 115.9 66 86.4
BcaB05g22095 Brassica carinata HOM05D001038 ORTHO05D016776 1.2e-23 114.0 64 85.9
A10p08770 Brassica napus HOM05D001038 ORTHO05D016776 1.5e-23 113.6 64 82.8
C04p40350 Brassica napus HOM05D001038 ORTHO05D016776 2.0e-23 113.2 64 82.8
BolC4t25613H Brassica oleracea HOM05D001038 ORTHO05D016776 2.0e-23 113.2 64 82.8
BcaC01g03622 Brassica carinata HOM05D001038 ORTHO05D016776 5.8e-23 111.7 64 81.2
BcaC07g39263 Brassica carinata HOM05D001038 ORTHO05D016776 7.5e-23 111.3 64 81.2
C08p22730 Brassica napus HOM05D001038 ORTHO05D016776 7.5e-23 111.3 64 81.2
BolC4t27749H Brassica oleracea HOM05D001038 ORTHO05D016776 7.5e-23 111.3 64 81.2
BraSC37t46126Z Brassica rapa HOM05D001038 ORTHO05D016776 7.5e-23 111.3 64 81.2
BcaC08g46850 Brassica carinata HOM05D001038 ORTHO05D000395 9.8e-23 110.9 64 79.7
BcaC02g09232 Brassica carinata HOM05D003139 ORTHO05D003540 3.2e-21 105.9 61 83.6
BcaB03g16464 Brassica carinata HOM05D001038 ORTHO05D018589 1.1e-13 80.9 92 48.9
BcaB04g17690 Brassica carinata HOM05D001038 ORTHO05D018589 3.2e-13 79.3 94 47.9
BcaB02g06555 Brassica carinata HOM05D001038 ORTHO05D010763 7.1e-13 78.2 93 48.4
BcaB06g26737 Brassica carinata HOM05D001038 ORTHO05D010763 9.2e-13 77.8 60 58.3
BolC4t26248H Brassica oleracea HOM05D001038 ORTHO05D018589 3.5e-12 75.9 58 62.1
A05p23600 Brassica napus HOM05D001038 ORTHO05D018589 7.8e-12 74.7 105 46.7
BraA05t21228Z Brassica rapa HOM05D001038 ORTHO05D018589 7.8e-12 74.7 105 46.7
BcaC08g44172 Brassica carinata HOM05D001038 ORTHO05D018589 1.1e-10 70.9 110 37.3
BcaB05g22891 Brassica carinata HOM05D001038 ORTHO05D010763 1.5e-10 70.5 88 44.3
BcaB07g33328 Brassica carinata HOM05D001038 ORTHO05D010763 1.5e-10 70.5 89 41.6
BcaNung01360 Brassica carinata HOM05D001038 ORTHO05D010763 1.5e-10 70.5 89 42.7
BcaC02g08100 Brassica carinata HOM05D001038 ORTHO05D018589 1.9e-10 70.1 58 56.9
C04p40300 Brassica napus HOM05D003139 ORTHO05D003540 1.9e-10 70.1 55 63.6
BraA02t06821Z Brassica rapa HOM05D001038 ORTHO05D000395 4.7e-09 65.5 185 32.4
BraA10t43039Z Brassica rapa HOM05D001038 ORTHO05D000395 4.0e-08 62.4 66 51.5
A04p22180 Brassica napus HOM05D001038 ORTHO05D000395 5.2e-08 62.0 66 51.5
BraA08t34217Z Brassica rapa HOM05D001038 ORTHO05D016716 5.2e-08 62.0 59 50.8
C04p40310 Brassica napus HOM05D001038 ORTHO05D033058 8.9e-08 61.2 32 87.5
BolC4t25611H Brassica oleracea HOM05D001038 ORTHO05D033058 8.9e-08 61.2 32 87.5
BcaB06g25472 Brassica carinata HOM05D001038 ORTHO05D010763 1.2e-07 60.8 94 41.5
C07p34820 Brassica napus HOM05D001038 ORTHO05D000395 1.2e-07 60.8 105 34.3
A03p31860 Brassica napus HOM05D001038 ORTHO05D024045 1.5e-07 60.5 57 50.9
A03p51100 Brassica napus HOM05D001038 ORTHO05D024045 1.5e-07 60.5 57 50.9
BcaC08g46990 Brassica carinata HOM05D025413 ORTHO05D021599 2.0e-07 60.1 57 47.4
C07p11760 Brassica napus HOM05D001038 ORTHO05D024045 2.0e-07 60.1 57 50.9
BcaB01g01601 Brassica carinata HOM05D001038 ORTHO05D090378 2.6e-07 59.7 56 53.6
C06p18900 Brassica napus HOM05D001038 ORTHO05D016716 2.6e-07 59.7 126 34.9
BcaB08g35144 Brassica carinata HOM05D001038 ORTHO05D021599 3.4e-07 59.3 64 43.8
BcaC06g35698 Brassica carinata HOM05D001038 ORTHO05D031981 3.4e-07 59.3 76 42.1
BcaC06g36128 Brassica carinata HOM05D007774 ORTHO05D000395 5.8e-07 58.5 82 42.7
BNapus_Darmor_BZH_scaffold_97p00160 Brassica napus HOM05D030261 ORTHO05D032952 5.8e-07 58.5 134 35.8
BcaC08g44444 Brassica carinata HOM05D001038 ORTHO05D016716 9.9e-07 57.8 124 33.9
BolC5t32403H Brassica oleracea HOM05D001038 ORTHO05D016716 1.3e-06 57.4 57 49.1
BcaB07g32567 Brassica carinata HOM05D001038 ORTHO05D010763 1.7e-06 57.0 103 36.9
BcaC06g36746 Brassica carinata HOM05D001038 ORTHO05D010763 1.7e-06 57.0 75 42.7
C07p07480 Brassica napus HOM05D001038 ORTHO05D000395 1.7e-06 57.0 184 32.1
BcaC05g27690 Brassica carinata HOM05D001038 ORTHO05D016716 2.2e-06 56.6 59 49.2
BcaC08g44142 Brassica carinata HOM05D001038 ORTHO05D000395 2.9e-06 56.2 128 33.6
BcaB01g01349 Brassica carinata HOM05D001038 ORTHO05D096136 3.8e-06 55.8 56 46.4
BcaC06g35568 Brassica carinata HOM05D001038 ORTHO05D016703 3.8e-06 55.8 79 41.8
BcaB07g32737 Brassica carinata HOM05D001038 ORTHO05D000395 4.9e-06 55.5 57 49.1
C07p11920 Brassica napus HOM05D001038 ORTHO05D031981 4.9e-06 55.5 132 32.6
BolC7t40492H Brassica oleracea HOM05D001038 ORTHO05D010763 4.9e-06 55.5 70 42.9
BcaB01g04196 Brassica carinata HOM05D001038 ORTHO05D000395 6.4e-06 55.1 45 62.2
BcaC04g21625 Brassica carinata HOM05D001038 ORTHO05D016703 6.4e-06 55.1 54 48.1
BolC7t41164H Brassica oleracea HOM05D001038 ORTHO05D000395 6.4e-06 55.1 191 30.4
BolC9t55839H Brassica oleracea HOM05D001038 ORTHO05D016703 6.4e-06 55.1 54 48.1
BolC9t58942H Brassica oleracea HOM05D001038 ORTHO05D010763 8.4e-06 54.7 61 47.5


User provided reference genes

Program Settings