Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g23185 Brassica carinata HOM05D001239 ORTHO05D023908 5.9e-118 427.6 219 100.0
BcaB04g18066 Brassica carinata HOM05D001239 ORTHO05D023908 4.4e-28 129.0 141 48.2
C01p30110 Brassica napus HOM05D001239 ORTHO05D023908 7.0e-26 121.7 167 43.1
BcaC01g05559 Brassica carinata HOM05D001239 ORTHO05D011709 5.9e-17 92.0 127 44.9
C09p42620 Brassica napus HOM05D001239 ORTHO05D011709 1.7e-16 90.5 157 38.9
BcaC01g03871 Brassica carinata HOM05D001239 ORTHO05D011709 5.0e-16 89.0 74 59.5
BolC5t30244H Brassica oleracea HOM05D001239 ORTHO05D011709 6.5e-16 88.6 165 36.4
BolC1t02956H Brassica oleracea HOM05D001239 ORTHO05D023908 2.8e-14 83.2 88 46.6
BcaB07g33550 Brassica carinata HOM05D001239 ORTHO05D011709 1.8e-13 80.5 108 44.4
BcaB07g30912 Brassica carinata HOM05D000496 ORTHO05D000411 3.4e-12 76.3 158 38.6
BcaC04g19167 Brassica carinata HOM05D000496 ORTHO05D000411 2.2e-11 73.6 77 48.1
BraA04t17766Z Brassica rapa HOM05D001239 ORTHO05D024427 4.9e-11 72.4 151 34.4
BraA09t38239Z Brassica rapa HOM05D014076 ORTHO05D021903 4.9e-11 72.4 186 34.4
BcaC05g25304 Brassica carinata HOM05D000508 ORTHO05D000371 8.3e-11 71.6 77 49.4
BcaC09g49677 Brassica carinata HOM05D000496 ORTHO05D011709 1.4e-10 70.9 70 48.6
A06p35270 Brassica napus HOM05D000591 ORTHO05D000579 2.4e-10 70.1 98 44.9
C05p11830 Brassica napus HOM05D001239 ORTHO05D033080 2.4e-10 70.1 159 34.6
BcaC04g22862 Brassica carinata HOM05D000496 ORTHO05D000411 1.2e-09 67.8 165 33.9
BolC2t10713H Brassica oleracea HOM05D001239 ORTHO05D011709 1.6e-09 67.4 152 34.9
BcaB01g02634 Brassica carinata HOM05D000496 ORTHO05D000411 2.7e-09 66.6 170 34.1
BcaC01g02173 Brassica carinata HOM05D001239 ORTHO05D017499 3.5e-09 66.2 81 44.4
C03p67910 Brassica napus HOM05D001239 ORTHO05D017499 3.5e-09 66.2 81 44.4
BcaB03g11924 Brassica carinata HOM05D001239 ORTHO05D011709 4.5e-09 65.9 89 40.4
BcaB01g01785 Brassica carinata HOM05D000496 ORTHO05D000925 5.9e-09 65.5 157 33.8
C01p34040 Brassica napus HOM05D001239 ORTHO05D011709 5.9e-09 65.5 108 36.1
BcaC07g40131 Brassica carinata HOM05D014076 ORTHO05D000006 7.8e-09 65.1 142 36.6
A01p18960 Brassica napus HOM05D014076 ORTHO05D021903 7.8e-09 65.1 86 43.0
C03p49130 Brassica napus HOM05D014076 ORTHO05D024532 7.8e-09 65.1 77 45.5
BcaC02g09195 Brassica carinata HOM05D001239 ORTHO05D031919 1.3e-08 64.3 93 38.7
BolC4t26715H Brassica oleracea HOM05D001239 ORTHO05D011709 1.3e-08 64.3 79 44.3
BolC2t08478H Brassica oleracea HOM05D001239 ORTHO05D024427 1.7e-08 63.9 154 32.5
A05p24750 Brassica napus HOM05D002138 ORTHO05D002106 2.3e-08 63.5 62 48.4
C04p30980 Brassica napus HOM05D001035 ORTHO05D021752 2.3e-08 63.5 112 37.5
C03p49160 Brassica napus HOM05D014076 ORTHO05D024532 6.6e-08 62.0 77 44.2
BolC3t17197H Brassica oleracea HOM05D014076 ORTHO05D024532 6.6e-08 62.0 77 44.2
BcaC06g36045 Brassica carinata HOM05D000496 ORTHO05D000411 8.6e-08 61.6 159 27.0
BraA01t01837Z Brassica rapa HOM05D014076 ORTHO05D021903 1.5e-07 60.8 178 31.5
BolC8t49935H Brassica oleracea HOM05D001239 ORTHO05D011709 1.9e-07 60.5 194 26.3
C08p07070 Brassica napus HOM05D001239 ORTHO05D024427 3.3e-07 59.7 150 31.3
BcaC05g27311 Brassica carinata HOM05D001239 ORTHO05D011709 9.5e-07 58.2 79 43.0
BolC8t47551H Brassica oleracea HOM05D001239 ORTHO05D024427 1.2e-06 57.8 150 30.7
BraA06t25448Z Brassica rapa HOM05D001239 ORTHO05D017499 1.2e-06 57.8 99 37.4
C09p49690 Brassica napus HOM05D001239 ORTHO05D011709 1.6e-06 57.4 149 33.6
BcaC02g11658 Brassica carinata HOM05D014076 ORTHO05D021903 2.1e-06 57.0 152 34.2
BcaC08g44422 Brassica carinata HOM05D001239 ORTHO05D017499 2.1e-06 57.0 74 40.5
BcaC06g33595 Brassica carinata HOM05D000003 ORTHO05D000006 3.6e-06 56.2 73 41.1
C06p18600 Brassica napus HOM05D001239 ORTHO05D017499 3.6e-06 56.2 95 35.8
BolC7t40747H Brassica oleracea HOM05D001239 ORTHO05D027739 3.6e-06 56.2 139 34.5
BolC1t05632H Brassica oleracea HOM05D014076 ORTHO05D021903 4.7e-06 55.8 151 31.8
BcaC04g22514 Brassica carinata HOM05D001239 ORTHO05D027739 6.1e-06 55.5 60 46.7
BcaB06g26119 Brassica carinata HOM05D001239 ORTHO05D011709 8.0e-06 55.1 196 28.1


User provided reference genes

Program Settings