Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g23064 Brassica carinata HOM05D004667 ORTHO05D005522 1.1e-151 540.0 306 100.0
BraA01t02497Z Brassica rapa HOM05D004667 ORTHO05D005522 1.6e-97 360.1 235 91.9
A01p25820 Brassica napus HOM05D004667 ORTHO05D005522 1.8e-96 356.7 235 91.5
BolC1t03209H Brassica oleracea HOM05D004667 ORTHO05D005522 3.8e-94 349.0 235 91.1
Thhalv10010670m.g Eutrema salsugineum HOM05D004667 ORTHO05D005522 6.4e-86 321.6 234 85.5
Sp5g14280 Schrenkiella parvula HOM05D004667 ORTHO05D005522 1.7e-83 313.5 239 82.0
AL5G26930 Arabidopsis lyrata HOM05D004667 ORTHO05D005522 1.4e-80 303.9 237 79.7
Carub.0005s1377 Capsella rubella HOM05D004667 ORTHO05D005522 4.5e-79 298.9 240 79.2
CARHR156320 Cardamine hirsuta HOM05D004667 ORTHO05D005522 6.4e-78 295.0 238 80.3
BraA06t25665Z Brassica rapa HOM05D004667 ORTHO05D005522 3.2e-77 292.7 242 82.2
A06p27240 Brassica napus HOM05D004667 ORTHO05D005522 5.4e-77 292.0 242 81.8
BcaB02g10693 Brassica carinata HOM05D004667 ORTHO05D005522 4.6e-76 288.9 241 79.7
C03p67020 Brassica napus HOM05D004667 ORTHO05D005522 6.7e-75 285.0 242 81.0
BcaC01g02286 Brassica carinata HOM05D004667 ORTHO05D005522 1.9e-74 283.5 241 80.9
BolC3t18977H Brassica oleracea HOM05D004667 ORTHO05D005522 1.9e-74 283.5 242 80.6
AT3G47640 Arabidopsis thaliana HOM05D004667 ORTHO05D005522 4.0e-72 275.8 240 77.1
Aa31LG4G16380 Aethionema arabicum HOM05D004667 ORTHO05D005522 6.9e-64 248.4 235 70.6
BcaC09g49811 Brassica carinata HOM05D004667 ORTHO05D005522 2.5e-61 240.0 180 86.1
THA.LOC104818253 Tarenaya hassleriana HOM05D004667 ORTHO05D005522 7.2e-45 185.3 237 59.9
C01p32730 Brassica napus HOM05D004667 ORTHO05D005522 2.6e-42 176.8 141 92.2
RcHm_v2.0_Chr7g0181001 Rosa chinensis HOM05D004667 ORTHO05D005522 6.5e-38 162.2 213 46.0
Cpa.g.c30141.2 Carica papaya HOM05D004667 ORTHO05D005522 1.1e-37 161.4 219 45.2
Haze_07341 Corylus avellana HOM05D005938 ORTHO05D007654 2.1e-36 157.1 219 54.3
QL10p016532 Quercus lobata HOM05D004667 ORTHO05D005522 2.7e-36 156.8 215 47.4
MD06G1191600 Malus domestica HOM05D004667 ORTHO05D005522 6.1e-36 155.6 232 44.4
Cfa018960 Carpinus fangiana HOM05D004667 ORTHO05D005522 1.8e-35 154.1 228 53.1
FAN08G0134 Fragaria x ananassa HOM05D004667 ORTHO05D005522 2.3e-35 153.7 216 44.9
Gohir.D11G033900 Gossypium hirsutum HOM05D004667 ORTHO05D005522 2.3e-35 153.7 235 43.4
Ciclev10021941m.g Citrus clementina HOM05D004667 ORTHO05D005522 3.9e-35 152.9 244 41.4
Gohir.A11G030611 Gossypium hirsutum HOM05D004667 ORTHO05D005522 6.7e-35 152.1 234 43.2
Prupe.5G190100 Prunus persica HOM05D004667 ORTHO05D005522 1.5e-34 151.0 231 42.0
Thecc.03G084200 Theobroma cacao HOM05D004667 ORTHO05D005522 1.5e-34 151.0 217 44.2
Duzib084G1199 Durio zibethinus HOM05D004667 ORTHO05D005522 2.0e-34 150.6 244 43.4
FvH4_5g15171 Fragaria vesca HOM05D004667 ORTHO05D005522 2.0e-34 150.6 242 42.6
Ca_21829_v3 Cicer arietinum L. HOM05D004667 ORTHO05D005522 3.3e-34 149.8 234 40.6
Gorai.007G036700 Gossypium raimondii HOM05D004667 ORTHO05D005522 3.3e-34 149.8 235 42.6
Lj4g0024645 Lotus japonicus HOM05D004667 ORTHO05D005522 5.7e-34 149.1 235 40.9
Lalb_Chr07g0177971 Lupinus albus HOM05D004667 ORTHO05D005522 6.3e-33 145.6 235 40.9
Duzib205G0185 Durio zibethinus HOM05D004667 ORTHO05D005522 1.1e-32 144.8 211 43.1
ClCG06G016270 Citrullus lanatus HOM05D004667 ORTHO05D005522 3.1e-32 143.3 209 43.5
COL.COLO4_24543 Corchorus olitorius HOM05D004667 ORTHO05D005522 3.1e-32 143.3 233 44.2
Potri.003G074400 Populus trichocarpa HOM05D004667 ORTHO05D005522 4.1e-32 142.9 240 43.3
TPR.G34729 Trifolium pratense HOM05D004667 ORTHO05D005522 4.1e-32 142.9 238 41.2
Psat4g051040 Pisum sativum HOM05D004667 ORTHO05D005522 5.3e-32 142.5 236 41.5
Sabra03G0045100 Salix brachista HOM05D004667 ORTHO05D005522 5.3e-32 142.5 217 46.1
Eucgr.B00470 Eucalyptus grandis HOM05D004667 ORTHO05D005522 7.0e-32 142.1 220 42.7
Manes.14G077100 Manihot esculenta HOM05D004667 ORTHO05D005522 7.0e-32 142.1 235 41.7
Duzib068G0725 Durio zibethinus HOM05D004667 ORTHO05D005522 9.1e-32 141.7 221 48.0
CiPaw.11G042700 Carya illinoinensis HOM05D004667 ORTHO05D005522 2.0e-31 140.6 216 54.6
PGR083G2477 Punica granatum HOM05D004667 ORTHO05D005522 2.6e-31 140.2 233 41.6
CsaV3_1G002260 Cucumis sativus L. HOM05D004667 ORTHO05D005522 3.5e-31 139.8 209 43.1
Atru.chr9.2269 Acer truncatum HOM05D004667 ORTHO05D005522 4.5e-31 139.4 229 52.8
Medtr4g108360 Medicago truncatula HOM05D004667 ORTHO05D005522 5.9e-31 139.0 238 40.3
BcaC01g01787 Brassica carinata HOM05D004667 ORTHO05D032196 7.7e-31 138.7 109 68.8
Phvul.003G191000 Phaseolus vulgaris HOM05D004667 ORTHO05D005522 7.7e-31 138.7 233 42.5
Glyma.05G027600 Glycine max HOM05D004667 ORTHO05D005522 1.0e-30 138.3 238 40.3
Lalb_Chr13g0303301 Lupinus albus HOM05D004667 ORTHO05D005522 1.0e-30 138.3 236 40.7
MD14G1198000 Malus domestica HOM05D004667 ORTHO05D005522 1.3e-30 137.9 217 41.9
arahy.Tifrunner.gnm1.ann1.0RV7R4 Arachis hypogaea HOM05D004667 ORTHO05D005522 1.7e-30 137.5 241 39.8
arahy.Tifrunner.gnm1.ann1.U816VA Arachis hypogaea HOM05D004667 ORTHO05D005522 2.2e-30 137.1 234 44.4
Dinv19946 Davidia involucrata HOM05D004667 ORTHO05D005522 2.2e-30 137.1 215 41.4
MELO3C017166.2 Cucumis melo HOM05D004667 ORTHO05D005522 3.8e-30 136.3 227 41.4
Dinv38692 Davidia involucrata HOM05D004667 ORTHO05D005522 3.8e-30 136.3 215 45.1
A06p19950 Brassica napus HOM05D003537 ORTHO05D004180 6.5e-30 135.6 144 55.6
BraA06t25078Z Brassica rapa HOM05D003537 ORTHO05D004180 6.5e-30 135.6 144 55.6
VMungo1215G1912 Vigna mungo HOM05D004667 ORTHO05D005522 1.5e-29 134.4 232 43.1
Potri.015G142700 Populus trichocarpa HOM05D004667 ORTHO05D005522 4.2e-29 132.9 239 41.8
Sed0008118 Sechium edule HOM05D004667 ORTHO05D005522 5.5e-29 132.5 207 41.5
Glyma.17G098900 Glycine max HOM05D004667 ORTHO05D005522 7.2e-29 132.1 216 39.8
TWI15G0884 Tripterygium wilfordii HOM05D004667 ORTHO05D005522 1.6e-28 131.0 212 40.1
Hma1.2p1_0735F.1_g210470 Hydrangea macrophylla HOM05D004667 ORTHO05D005522 4.7e-28 129.4 229 40.6
Sc04g0002550 Simmondsia chinensis HOM05D004667 ORTHO05D005522 4.7e-28 129.4 238 39.9
CANSAT80G1185 Cannabis sativa HOM05D004667 ORTHO05D005522 8.0e-28 128.6 221 39.8
TWI60G0935 Tripterygium wilfordii HOM05D004667 ORTHO05D005522 1.4e-27 127.9 245 40.0
EL10Ac7g16410 Beta vulgaris HOM05D004667 ORTHO05D005522 2.6e-26 123.6 235 43.4
AUR62001482 Chenopodium quinoa HOM05D004667 ORTHO05D005522 2.6e-26 123.6 226 37.6
CSS0005857 Camellia sinensis var. sinensis HOM05D004667 ORTHO05D005522 5.7e-26 122.5 227 38.3
Lj5C112T10 Lonicera japonica HOM05D004667 ORTHO05D005522 5.7e-26 122.5 217 37.8
Rhsim08G0156600 Rhododendron simsii HOM05D004667 ORTHO05D005522 7.5e-26 122.1 220 40.5
Actinidia04904 Actinidia chinensis HOM05D004667 ORTHO05D005522 2.8e-25 120.2 212 40.6
AUR62009884 Chenopodium quinoa HOM05D004667 ORTHO05D005522 2.8e-25 120.2 232 36.2
ECA246G3018 Erigeron canadensis HOM05D004667 ORTHO05D005522 8.3e-25 118.6 212 40.6
GSVIVG01011386001 Vitis vinifera HOM05D004667 ORTHO05D005522 1.1e-24 118.2 216 35.2
CAN.G407.116 Capsicum annuum HOM05D004667 ORTHO05D005522 5.4e-24 115.9 206 51.9
HanXRQChr05g0158091 Helianthus annuus HOM05D004667 ORTHO05D005522 5.4e-24 115.9 212 39.2
PGSC0003DMG400000599 Solanum tuberosum HOM05D004667 ORTHO05D005522 7.0e-24 115.5 210 51.4
Solyc03g116340.3 Solanum lycopersicum HOM05D004667 ORTHO05D005522 1.6e-23 114.4 210 51.4
BcaC01g00891 Brassica carinata HOM05D004667 ORTHO05D005522 2.7e-23 113.6 74 79.7
Sopen03g035270 Solanum pennellii HOM05D004667 ORTHO05D005522 2.7e-23 113.6 210 51.4
Ah.08g216800 Amaranthus hybridus HOM05D004667 ORTHO05D005522 3.5e-23 113.2 214 39.3
TAR371G0790 Trochodendron aralioides HOM05D004667 ORTHO05D005522 3.5e-23 113.2 226 34.5
Nn3g17203 Nelumbo nucifera HOM05D004667 ORTHO05D005522 5.9e-23 112.5 221 34.4
Nn4g23126 Nelumbo nucifera HOM05D004667 ORTHO05D005522 1.0e-22 111.7 231 34.6
MSTRG.4419 Avicennia marina HOM05D004667 ORTHO05D005522 2.2e-22 110.5 219 35.2
Phvul.009G188251 Phaseolus vulgaris HOM05D004667 ORTHO05D005522 1.1e-21 108.2 219 37.4
Migut.D01831 Erythranthe guttata HOM05D004667 ORTHO05D005522 1.9e-21 107.5 235 36.2
C03p71870 Brassica napus HOM05D004667 ORTHO05D032196 2.5e-21 107.1 92 64.1
Manes.06G094100 Manihot esculenta HOM05D004667 ORTHO05D005522 2.5e-21 107.1 238 42.9
BolC3t18707H Brassica oleracea HOM05D004667 ORTHO05D005522 4.2e-21 106.3 74 75.7
TAR629G0869 Trochodendron aralioides HOM05D000350 ORTHO05D005522 5.5e-21 105.9 219 34.2
Sed0021322 Sechium edule HOM05D004667 ORTHO05D005522 1.2e-20 104.8 212 37.7
Nitab4.5_0000026g0120 Nicotiana tabacum HOM05D004667 ORTHO05D005522 1.6e-20 104.4 244 35.7
Nitab4.5_0000741g0010 Nicotiana tabacum HOM05D004667 ORTHO05D005522 1.6e-20 104.4 246 36.6
vmacro17553 Vaccinium macrocarpon HOM05D004667 ORTHO05D005522 1.6e-20 104.4 202 39.1
PSO832G1839 Papaver somniferum HOM05D004667 ORTHO05D005522 2.1e-20 104.0 211 36.5
Peaxi162Scf00274g00834 Petunia axillaris HOM05D004667 ORTHO05D005522 2.1e-20 104.0 236 49.2
SalBow1G0094 Salvia bowleyana HOM05D004667 ORTHO05D005522 2.1e-20 104.0 231 32.9
Nitab4.5_0014986g0010 Nicotiana tabacum HOM05D004667 ORTHO05D005522 2.7e-20 103.6 224 48.7
Nitab4.5_0002257g0120 Nicotiana tabacum HOM05D004667 ORTHO05D005522 3.6e-20 103.2 215 48.4
Peaxi162Scf00712g00029 Petunia axillaris HOM05D004667 ORTHO05D005522 4.7e-20 102.8 211 34.6
Rhsim08G0068600 Rhododendron simsii HOM05D004667 ORTHO05D005522 6.1e-20 102.4 241 34.4
Actinidia17543 Actinidia chinensis HOM05D004667 ORTHO05D005522 8.0e-20 102.1 225 32.4
Cc04_g16930 Coffea canephora HOM05D004667 ORTHO05D005522 8.0e-20 102.1 212 47.2
Sabra15G0152700 Salix brachista HOM05D004667 ORTHO05D005522 1.0e-19 101.7 165 44.2
Hund02659 Selenicereus undatus HOM05D004667 ORTHO05D005522 1.0e-19 101.7 256 34.4
BolC3t19480H Brassica oleracea HOM05D004667 ORTHO05D032196 1.4e-19 101.3 82 65.9
PSO063G1198 Papaver somniferum HOM05D004667 ORTHO05D005522 1.4e-19 101.3 220 34.5
Aqoxy3G03350 Aquilegia oxysepala HOM05D004667 ORTHO05D005522 3.0e-19 100.1 232 32.8
BraA03t15338Z Brassica rapa HOM05D004667 ORTHO05D005522 3.0e-19 100.1 70 75.7
vmacro18196 Vaccinium macrocarpon HOM05D004667 ORTHO05D005522 1.2e-18 98.2 218 31.7
Actinidia02716 Actinidia chinensis HOM05D004667 ORTHO05D005522 1.5e-18 97.8 216 32.9
Cc07_g03280 Coffea canephora HOM05D004667 ORTHO05D005522 1.5e-18 97.8 230 32.6
Actinidia37637 Actinidia chinensis HOM05D004667 ORTHO05D005522 5.7e-18 95.9 179 38.5
CDE05G0260 Ceratophyllum demersum HOM05D004667 ORTHO05D005522 5.7e-18 95.9 219 32.4
VMungo1309G0024 Vigna mungo HOM05D004667 ORTHO05D005522 5.7e-18 95.9 245 33.9
DCAR_021526 Daucus carota HOM05D004667 ORTHO05D005522 7.5e-18 95.5 220 41.4
MSTRG.3233 Avicennia marina HOM05D004667 ORTHO05D005522 1.3e-17 94.7 225 33.8
Lsat_1_v5_gn_5_19381 Lactuca sativa HOM05D000189 ORTHO05D000474 1.3e-17 94.7 94 56.4
GSVIVG01008025001 Vitis vinifera HOM05D004667 ORTHO05D005522 1.3e-17 94.7 124 41.9
Hma1.2p1_0449F.1_g155390 Hydrangea macrophylla HOM05D004667 ORTHO05D005522 2.2e-17 94.0 215 32.6
CDE05G2553 Ceratophyllum demersum HOM05D004667 ORTHO05D005522 2.8e-17 93.6 219 32.0
Migut.H00911 Erythranthe guttata HOM05D004667 ORTHO05D005522 2.8e-17 93.6 242 31.8
ECA232G3869 Erigeron canadensis HOM05D004667 ORTHO05D005522 1.8e-16 90.9 210 31.4
MSTRG.23944 Avicennia marina HOM05D004667 ORTHO05D005522 3.1e-16 90.1 212 30.2
ATR0564G258 Amborella trichopoda HOM05D004667 ORTHO05D005522 4.1e-16 89.7 219 31.1
HPP92_006020 Vanilla planifolia HOM05D004366 ORTHO05D005058 4.1e-16 89.7 103 49.5
Os11g0601700 Oryza sativa ssp. japonica HOM05D004667 ORTHO05D005522 5.9e-15 85.9 94 50.0
DCAR_011136 Daucus carota HOM05D004667 ORTHO05D005522 1.3e-14 84.7 219 29.2
SGA_v2.0_scaffold59G20685 Striga asiatica HOM05D004667 ORTHO05D005522 1.7e-14 84.3 232 28.4
MBI02_g23680_MAGBIO Magnolia biondii HOM05D004667 ORTHO05D005522 3.8e-14 83.2 211 31.3
Oeu022621.1 Olea europaea HOM05D004667 ORTHO05D005522 3.8e-14 83.2 194 34.0
Lsat_1_v5_gn_4_178121 Lactuca sativa HOM05D004667 ORTHO05D005522 1.2e-12 78.2 210 30.5
Os07g0628500 Oryza sativa ssp. japonica HOM05D004667 ORTHO05D005522 1.6e-12 77.8 71 54.9
Os03g0379300 Oryza sativa ssp. japonica HOM05D004667 ORTHO05D005522 2.1e-12 77.4 227 36.6
CDE09G1261 Ceratophyllum demersum HOM05D004667 ORTHO05D005522 4.7e-12 76.3 228 36.4
Zm00001eb018460 Zea mays HOM05D004667 ORTHO05D005522 1.4e-11 74.7 250 33.2
Oeu021379.1 Olea europaea HOM05D004667 ORTHO05D005522 1.8e-11 74.3 189 37.0
C08p25720 Brassica napus HOM05D004667 ORTHO05D005522 2.3e-11 73.9 45 84.4
BolC8t50187H Brassica oleracea HOM05D004667 ORTHO05D005522 2.3e-11 73.9 45 84.4
HanXRQChr09g0265291 Helianthus annuus HOM05D004667 ORTHO05D005522 3.0e-11 73.6 234 29.9
BcaB03g16837 Brassica carinata HOM05D004667 ORTHO05D005522 1.7e-09 67.8 54 74.1
BolC9t55593H Brassica oleracea HOM05D004667 ORTHO05D005522 6.3e-09 65.9 60 65.0
Oeu016168.2 Olea europaea HOM05D004667 ORTHO05D005522 6.3e-09 65.9 58 53.4
BcaC01g02459 Brassica carinata HOM05D004667 ORTHO05D005522 2.4e-08 63.9 41 75.6
Zm00001eb328250 Zea mays HOM05D004667 ORTHO05D005522 5.4e-08 62.8 204 28.9
Lsat_1_v5_gn_4_108900 Lactuca sativa HOM05D000650 ORTHO05D000735 1.2e-07 61.6 58 51.7
vmacro18198 Vaccinium macrocarpon HOM05D004667 ORTHO05D005522 1.0e-06 58.5 175 28.0
C02p18750 Brassica napus HOM05D003097 ORTHO05D003437 2.3e-06 57.4 68 44.1
BolC3t19479H Brassica oleracea HOM05D004667 ORTHO05D005522 2.3e-06 57.4 37 75.7
MSTRG.27673 Avicennia marina HOM05D003097 ORTHO05D003437 2.9e-06 57.0 91 33.0
BcaNung00768 Brassica carinata HOM05D003097 ORTHO05D003437 2.9e-06 57.0 68 42.6
BraA01t00253Z Brassica rapa HOM05D003097 ORTHO05D003437 2.9e-06 57.0 68 39.7
Duzib248G0851 Durio zibethinus HOM05D003097 ORTHO05D003437 3.9e-06 56.6 68 41.2
Gohir.A11G175100 Gossypium hirsutum HOM05D003097 ORTHO05D003437 3.9e-06 56.6 68 39.7
BcaNung03019 Brassica carinata HOM05D003097 ORTHO05D003437 5.0e-06 56.2 68 41.2
BcaNung03021 Brassica carinata HOM05D003097 ORTHO05D003437 5.0e-06 56.2 98 40.8
C07p61510 Brassica napus HOM05D003097 ORTHO05D003437 5.0e-06 56.2 98 40.8
BolC7t46575H Brassica oleracea HOM05D003097 ORTHO05D003437 5.0e-06 56.2 98 40.8
BraA03t15471Z Brassica rapa HOM05D003097 ORTHO05D003437 5.0e-06 56.2 98 40.8
Potri.009G129600 Populus trichocarpa HOM05D003097 ORTHO05D003437 5.0e-06 56.2 68 39.7


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