Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g22341 Brassica carinata HOM05D007606 ORTHO05D009600 3.9e-45 185.7 94 100.0
BolC2t07555H Brassica oleracea HOM05D007606 ORTHO05D009600 1.8e-37 160.2 98 89.8
BcaC03g14159 Brassica carinata HOM05D007606 ORTHO05D009600 1.1e-36 157.5 98 88.8
BcaC04g19971 Brassica carinata HOM05D007606 ORTHO05D009600 4.8e-35 152.1 99 82.8
C09p49270 Brassica napus HOM05D007606 ORTHO05D009600 4.8e-35 152.1 99 82.8
BolC9t57778H Brassica oleracea HOM05D007606 ORTHO05D009600 4.8e-35 152.1 99 82.8
Sp6g19090 Schrenkiella parvula HOM05D007606 ORTHO05D009600 2.9e-32 142.9 104 79.8
Aa31LG3G13250 Aethionema arabicum HOM05D007606 ORTHO05D009600 9.3e-31 137.9 103 77.7
A02p08550 Brassica napus HOM05D007606 ORTHO05D009600 9.3e-31 137.9 97 81.4
C02p14290 Brassica napus HOM05D007606 ORTHO05D009600 1.2e-30 137.5 97 79.4
AT5G57370 Arabidopsis thaliana HOM05D007606 ORTHO05D009600 6.7e-29 131.7 102 75.5
AL8G33350 Arabidopsis lyrata HOM05D007606 ORTHO05D009600 8.7e-29 131.3 105 74.3
Carub.0008s1789 Capsella rubella HOM05D007606 ORTHO05D009600 1.1e-28 131.0 108 73.1
CARHR271170 Cardamine hirsuta HOM05D007606 ORTHO05D009600 4.3e-28 129.0 107 72.9
Prupe.1G084400 Prunus persica HOM05D007606 ORTHO05D009600 1.4e-26 124.0 94 72.3
Sed0005573 Sechium edule HOM05D007606 ORTHO05D009600 1.8e-26 123.6 98 69.4
BraA02t05924Z Brassica rapa HOM05D007606 ORTHO05D009600 5.3e-26 122.1 98 73.5
MD16G1256400 Malus domestica HOM05D007606 ORTHO05D009600 9.0e-26 121.3 95 71.6
THA.LOC104813519 Tarenaya hassleriana HOM05D007606 ORTHO05D009600 9.0e-26 121.3 102 70.6
FvH4_4g07990 Fragaria vesca HOM05D007606 ORTHO05D009600 2.0e-25 120.2 94 69.1
A10p14850 Brassica napus HOM05D007606 ORTHO05D009600 2.6e-25 119.8 59 98.3
BraA10t43563Z Brassica rapa HOM05D007606 ORTHO05D009600 2.6e-25 119.8 59 98.3
Glyma.17G062400 Glycine max HOM05D007606 ORTHO05D009600 3.4e-25 119.4 94 70.2
CsaV3_1G031690 Cucumis sativus L. HOM05D007606 ORTHO05D009600 7.6e-25 118.2 98 68.4
COL.COLO4_37736 Corchorus olitorius HOM05D007606 ORTHO05D009600 1.7e-24 117.1 95 68.4
Sc18g0007510 Simmondsia chinensis HOM05D007606 ORTHO05D009600 2.9e-24 116.3 93 68.8
MD13G1252200 Malus domestica HOM05D007606 ORTHO05D009600 3.8e-24 115.9 95 69.5
HPP92_010764 Vanilla planifolia HOM05D007606 ORTHO05D009600 3.8e-24 115.9 97 62.9
Glyma.13G097200 Glycine max HOM05D007606 ORTHO05D009600 5.0e-24 115.5 94 67.0
Cpa.g.sc523.4 Carica papaya HOM05D007606 ORTHO05D009600 6.5e-24 115.2 98 67.3
MELO3C017454.2 Cucumis melo HOM05D007606 ORTHO05D009600 6.5e-24 115.2 98 66.3
CiPaw.07G193100 Carya illinoinensis HOM05D007606 ORTHO05D009600 1.1e-23 114.4 101 63.4
Medtr4g127860 Medicago truncatula HOM05D007606 ORTHO05D009600 1.9e-23 113.6 94 67.0
Rhsim03G0264900 Rhododendron simsii HOM05D007606 ORTHO05D009600 1.9e-23 113.6 90 65.6
Sabra18G0078500 Salix brachista HOM05D007606 ORTHO05D009600 2.5e-23 113.2 96 69.8
EL10Ac8g18293 Beta vulgaris HOM05D007606 ORTHO05D009600 3.2e-23 112.8 106 63.2
HanXRQChr12g0365451 Helianthus annuus HOM05D007606 ORTHO05D009600 4.2e-23 112.5 97 67.0
FAN07G2281 Fragaria x ananassa HOM05D007606 ORTHO05D009600 5.5e-23 112.1 94 68.1
Manes.14G154600 Manihot esculenta HOM05D007606 ORTHO05D009600 5.5e-23 112.1 102 62.7
Atru.chr7.594 Acer truncatum HOM05D007606 ORTHO05D009600 7.2e-23 111.7 96 66.7
CSS0005882 Camellia sinensis var. sinensis HOM05D007606 ORTHO05D009600 9.3e-23 111.3 64 84.4
Gohir.D08G193500 Gossypium hirsutum HOM05D007606 ORTHO05D009600 9.3e-23 111.3 100 62.0
Psat4g012880 Pisum sativum HOM05D007606 ORTHO05D009600 1.2e-22 110.9 68 80.9
RcHm_v2.0_Chr4g0401721 Rosa chinensis HOM05D007606 ORTHO05D009600 1.6e-22 110.5 94 66.0
Lsat_1_v5_gn_8_67821 Lactuca sativa HOM05D007606 ORTHO05D009600 2.1e-22 110.2 97 66.0
Potri.018G091300 Populus trichocarpa HOM05D007606 ORTHO05D009600 2.1e-22 110.2 86 68.6
Gorai.004G203800 Gossypium raimondii HOM05D007606 ORTHO05D009600 2.7e-22 109.8 102 60.8
Actinidia01312 Actinidia chinensis HOM05D007606 ORTHO05D009600 3.6e-22 109.4 94 67.0
CANSAT11G0497 Cannabis sativa HOM05D007606 ORTHO05D009600 3.6e-22 109.4 102 64.7
Zm00001eb327770 Zea mays HOM05D007606 ORTHO05D009600 3.6e-22 109.4 71 78.9
Aqoxy7G03025 Aquilegia oxysepala HOM05D007606 ORTHO05D009600 6.1e-22 108.6 92 63.0
Ciclev10009582m.g Citrus clementina HOM05D007606 ORTHO05D009600 6.1e-22 108.6 103 60.2
TWI32G0742 Tripterygium wilfordii HOM05D007606 ORTHO05D009600 6.1e-22 108.6 96 65.6
Duzib168G1965 Durio zibethinus HOM05D007606 ORTHO05D009600 7.9e-22 108.2 94 63.8
Hma1.2p1_1025F.1_g249400 Hydrangea macrophylla HOM05D007606 ORTHO05D009600 1.0e-21 107.8 69 82.6
Thecc.09G175900 Theobroma cacao HOM05D007606 ORTHO05D009600 1.0e-21 107.8 94 62.8
Ah.09g229950 Amaranthus hybridus HOM05D007606 ORTHO05D009600 1.3e-21 107.5 102 62.7
Eucgr.C02351 Eucalyptus grandis HOM05D007606 ORTHO05D009600 2.3e-21 106.7 96 63.5
QL02p097943 Quercus lobata HOM05D007606 ORTHO05D009600 2.3e-21 106.7 64 84.4
Lalb_Chr13g0300161 Lupinus albus HOM05D007606 ORTHO05D009600 3.0e-21 106.3 94 63.8
Os02g0461600 Oryza sativa ssp. japonica HOM05D007606 ORTHO05D009600 3.0e-21 106.3 104 58.7
Phvul.003G144300 Phaseolus vulgaris HOM05D007606 ORTHO05D009600 3.0e-21 106.3 94 64.9
TAR383G0717 Trochodendron aralioides HOM05D007606 ORTHO05D009600 3.9e-21 105.9 65 83.1
FAN17G2268 Fragaria x ananassa HOM05D007606 ORTHO05D009600 5.1e-21 105.5 94 63.8
Lj5P601T23 Lonicera japonica HOM05D007606 ORTHO05D009600 5.1e-21 105.5 59 89.8
Gohir.A08G174900 Gossypium hirsutum HOM05D007606 ORTHO05D009600 8.7e-21 104.8 104 58.7
Nn5g27171 Nelumbo nucifera HOM05D007606 ORTHO05D009600 3.3e-20 102.8 94 64.9
PSO063G2142 Papaver somniferum HOM05D007606 ORTHO05D009600 3.3e-20 102.8 59 84.7
Hund26341 Selenicereus undatus HOM05D007606 ORTHO05D009600 3.3e-20 102.8 109 56.0
BcaB08g36096 Brassica carinata HOM05D007606 ORTHO05D009600 4.3e-20 102.4 66 84.8
HanXRQChr08g0212621 Helianthus annuus HOM05D007606 ORTHO05D009600 4.3e-20 102.4 96 61.5
arahy.Tifrunner.gnm1.ann1.TB3R4X Arachis hypogaea HOM05D007606 ORTHO05D009600 5.7e-20 102.1 83 68.7
SEGI_36552 Sequoiadendron giganteum HOM05D007606 ORTHO05D009600 5.7e-20 102.1 59 83.1
GSVIVG01029223001 Vitis vinifera HOM05D007606 ORTHO05D009600 7.4e-20 101.7 69 73.9
Ca_21234_v3 Cicer arietinum L. HOM05D007606 ORTHO05D009600 9.7e-20 101.3 53 90.6
SHI02893 Sapria himalayana HOM05D007606 ORTHO05D009600 1.6e-19 100.5 90 61.1
AUR62021308 Chenopodium quinoa HOM05D007606 ORTHO05D009600 4.8e-19 99.0 55 85.5
SGA_v2.0_scaffold66G22417 Striga asiatica HOM05D007606 ORTHO05D009600 8.2e-19 98.2 62 77.4
CAN.G321.18 Capsicum annuum HOM05D007606 ORTHO05D009600 1.1e-18 97.8 99 60.6
MSTRG.6226 Avicennia marina HOM05D007606 ORTHO05D009600 1.4e-18 97.4 68 72.1
Cc06_g13140 Coffea canephora HOM05D007606 ORTHO05D009600 1.4e-18 97.4 73 72.6
Nitab4.5_0000055g0310 Nicotiana tabacum HOM05D007606 ORTHO05D009600 1.4e-18 97.4 94 58.5
Sopen07g006820 Solanum pennellii HOM05D007606 ORTHO05D009600 2.4e-18 96.7 104 56.7
Migut.J01493 Erythranthe guttata HOM05D007606 ORTHO05D009600 3.1e-18 96.3 68 72.1
Oeu025687.1 Olea europaea HOM05D007606 ORTHO05D009600 3.1e-18 96.3 59 79.7
PSO339G0750 Papaver somniferum HOM05D007606 ORTHO05D009600 4.1e-18 95.9 91 60.4
PGSC0003DMG400004088 Solanum tuberosum HOM05D007606 ORTHO05D009600 2.6e-17 93.2 104 55.8
FAN12G2299 Fragaria x ananassa HOM05D007606 ORTHO05D009600 3.4e-17 92.8 80 63.8
CBR_g51476 Chara braunii HOM05D007606 ORTHO05D009600 5.9e-17 92.0 67 68.7
Mapoly0026s0023 Marchantia polymorpha HOM05D007606 ORTHO05D009600 1.9e-15 87.0 68 64.7
Pp3c7_10050 Physcomitrium patens HOM05D007606 ORTHO05D009600 2.5e-15 86.7 56 73.2
FAN22G0657 Fragaria x ananassa HOM05D007606 ORTHO05D009600 9.4e-15 84.7 80 62.5
AagrBONN_evm.TU.Sc2ySwM_362.441 Anthoceros agrestis HOM05D007606 ORTHO05D009600 1.2e-14 84.3 95 52.6
SMO358G0723 Selaginella moellendorffii HOM05D007606 ORTHO05D009600 1.8e-13 80.5 94 53.2
Cre10.g465950 Chlamydomonas reinhardtii HOM05D007606 ORTHO05D009600 9.1e-10 68.2 85 47.1


User provided reference genes

Program Settings