Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB05g21982 Brassica carinata HOM05D002465 ORTHO05D008860 1.8e-179 632.5 326 100.0
A02p11610 Brassica napus HOM05D002465 ORTHO05D005308 1.1e-168 596.7 318 95.6
BraA02t06223Z Brassica rapa HOM05D002465 ORTHO05D005308 1.1e-168 596.7 318 95.9
C02p19370 Brassica napus HOM05D002465 ORTHO05D005308 2.7e-167 592.0 318 94.7
AT5G52810 Arabidopsis thaliana HOM05D002465 ORTHO05D008860 1.8e-163 579.3 324 90.1
Thhalv10014103m.g Eutrema salsugineum HOM05D002465 ORTHO05D008860 6.9e-163 577.4 324 91.7
AL8G27240 Arabidopsis lyrata HOM05D002465 ORTHO05D008860 7.6e-162 573.9 324 89.8
BcaC03g14498 Brassica carinata HOM05D002465 ORTHO05D008860 2.2e-161 572.4 323 92.0
CARHR265740 Cardamine hirsuta HOM05D002465 ORTHO05D008860 2.1e-159 565.8 324 88.3
Aa31LG3G9050 Aethionema arabicum HOM05D002465 ORTHO05D008860 8.2e-156 553.9 323 86.1
BolC2t08072H Brassica oleracea HOM05D002465 ORTHO05D005308 1.8e-155 552.7 304 93.1
Sp6g14950 Schrenkiella parvula HOM05D002465 ORTHO05D005308 1.7e-153 546.2 305 92.1
THA.LOC104811948 Tarenaya hassleriana HOM05D002465 ORTHO05D008860 8.8e-142 507.3 320 79.4
Atru.chr1.341 Acer truncatum HOM05D002465 ORTHO05D008860 4.1e-123 445.3 320 69.7
Ciclev10006645m.g Citrus clementina HOM05D002465 ORTHO05D008860 3.5e-122 442.2 315 71.4
Prupe.2G302000 Prunus persica HOM05D002465 ORTHO05D008860 7.7e-122 441.0 320 67.8
Cpa.g.sc107.122 Carica papaya HOM05D002465 ORTHO05D008860 8.6e-121 437.6 317 69.1
Gohir.D12G255800 Gossypium hirsutum HOM05D002465 ORTHO05D008860 8.6e-121 437.6 320 69.4
COL.COLO4_30296 Corchorus olitorius HOM05D002465 ORTHO05D008860 1.9e-120 436.4 318 68.9
Gohir.A12G253500 Gossypium hirsutum HOM05D002465 ORTHO05D008860 1.9e-120 436.4 320 69.4
Gorai.008G273900 Gossypium raimondii HOM05D002465 ORTHO05D008860 4.2e-120 435.3 320 68.8
Duzib205G0883 Durio zibethinus HOM05D002465 ORTHO05D008860 7.2e-120 434.5 318 69.2
QL09p012523 Quercus lobata HOM05D002465 ORTHO05D008860 7.2e-120 434.5 322 67.4
Cfa016296 Carpinus fangiana HOM05D002465 ORTHO05D008860 2.1e-119 433.0 317 68.8
FAN01G0734 Fragaria x ananassa HOM05D002465 ORTHO05D008860 3.6e-119 432.2 322 67.7
FAN06G4105 Fragaria x ananassa HOM05D002465 ORTHO05D008860 3.6e-119 432.2 322 67.7
Thecc.03G185600 Theobroma cacao HOM05D002465 ORTHO05D008860 1.8e-118 429.9 317 68.5
Medtr1g099620 Medicago truncatula HOM05D002465 ORTHO05D008860 3.0e-118 429.1 323 66.9
FvH4_7g30420 Fragaria vesca HOM05D002465 ORTHO05D008860 4.0e-118 428.7 322 67.4
MD07G1279900 Malus domestica HOM05D002465 ORTHO05D008860 4.0e-118 428.7 320 65.9
CANSAT21G1380 Cannabis sativa HOM05D002465 ORTHO05D008860 6.8e-118 427.9 321 65.4
FAN03G2954 Fragaria x ananassa HOM05D002465 ORTHO05D008860 6.8e-118 427.9 322 66.8
CiPaw.05G261500 Carya illinoinensis HOM05D002465 ORTHO05D008860 1.2e-117 427.2 319 67.7
FAN10G1848 Fragaria x ananassa HOM05D002465 ORTHO05D008860 1.5e-117 426.8 322 66.8
FAN06G0587 Fragaria x ananassa HOM05D002465 ORTHO05D008860 3.4e-117 425.6 322 67.1
Glyma.20G163100 Glycine max HOM05D002465 ORTHO05D008860 5.7e-117 424.9 320 67.5
Sabra04G0047800 Salix brachista HOM05D002465 ORTHO05D008860 5.7e-117 424.9 319 69.6
FAN10G3921 Fragaria x ananassa HOM05D002465 ORTHO05D008860 7.5e-117 424.5 322 66.8
TWI23G0306 Tripterygium wilfordii HOM05D002465 ORTHO05D008860 7.5e-117 424.5 323 67.8
Lalb_Chr02g0141271 Lupinus albus HOM05D002465 ORTHO05D008860 2.2e-116 422.9 320 67.2
Manes.14G021500 Manihot esculenta HOM05D002465 ORTHO05D008860 8.3e-116 421.0 318 69.8
Haze_00056 Corylus avellana HOM05D002465 ORTHO05D008860 1.8e-115 419.9 328 66.2
Potri.004G072500 Populus trichocarpa HOM05D002465 ORTHO05D008860 1.8e-115 419.9 317 68.8
TPR.G7770 Trifolium pratense HOM05D002465 ORTHO05D008860 9.2e-115 417.5 322 66.1
Ca_10714_v3 Cicer arietinum L. HOM05D002465 ORTHO05D008860 4.5e-114 415.2 325 64.0
VMungo0720G1208 Vigna mungo HOM05D002465 ORTHO05D008860 5.9e-114 414.8 321 66.0
CAN.G204.25 Capsicum annuum HOM05D002465 ORTHO05D008860 1.0e-113 414.1 318 63.2
Lj5g0014102 Lotus japonicus HOM05D002465 ORTHO05D008860 1.7e-113 413.3 323 64.7
PGSC0003DMG400037424 Solanum tuberosum HOM05D002465 ORTHO05D008860 6.6e-113 411.4 322 61.8
PGSC0003DMG402028895 Solanum tuberosum HOM05D002465 ORTHO05D008860 6.6e-113 411.4 322 61.8
arahy.Tifrunner.gnm1.ann1.R026RD Arachis hypogaea HOM05D002465 ORTHO05D008860 1.5e-112 410.2 320 65.3
PGR142G3674 Punica granatum HOM05D002465 ORTHO05D008860 1.5e-112 410.2 323 64.4
Sopen06g012110 Solanum pennellii HOM05D002465 ORTHO05D008860 9.5e-112 407.5 318 61.3
Solyc06g036330.1 Solanum lycopersicum HOM05D002465 ORTHO05D008860 6.1e-111 404.8 318 60.7
Phvul.007G075300 Phaseolus vulgaris HOM05D002465 ORTHO05D008860 1.4e-110 403.7 321 64.5
DCAR_014522 Daucus carota HOM05D002465 ORTHO05D008860 3.0e-110 402.5 315 65.4
Psat6g195800 Pisum sativum HOM05D002465 ORTHO05D008860 3.0e-110 402.5 325 62.5
CSS0010708 Camellia sinensis var. sinensis HOM05D002465 ORTHO05D008860 6.8e-110 401.4 318 64.8
Dinv35265 Davidia involucrata HOM05D002465 ORTHO05D008860 8.3e-108 394.4 299 65.6
Sed0017948 Sechium edule HOM05D002465 ORTHO05D008860 8.3e-108 394.4 317 63.7
AUR62031433 Chenopodium quinoa HOM05D002465 ORTHO05D008860 1.8e-107 393.3 316 63.9
Ah.07g206480 Amaranthus hybridus HOM05D002465 ORTHO05D008860 2.7e-106 389.4 320 62.2
Cc02_g02280 Coffea canephora HOM05D002465 ORTHO05D008860 2.7e-106 389.4 321 62.0
ClCG05G008460 Citrullus lanatus HOM05D002465 ORTHO05D008860 6.0e-106 388.3 321 62.3
EL10Ac3g05401 Beta vulgaris HOM05D002465 ORTHO05D008860 2.3e-105 386.3 318 62.6
MBI11_g09066_MAGBIO Magnolia biondii HOM05D002465 ORTHO05D008860 1.5e-104 383.6 318 59.4
QL09p012480 Quercus lobata HOM05D002465 ORTHO05D008860 1.9e-104 383.3 322 62.1
Nn6g32108 Nelumbo nucifera HOM05D002465 ORTHO05D008860 3.3e-104 382.5 318 59.7
Nn6g32109 Nelumbo nucifera HOM05D002465 ORTHO05D008860 3.3e-104 382.5 318 59.7
MELO3C006954.2 Cucumis melo HOM05D002465 ORTHO05D008860 1.4e-102 377.1 321 60.7
Aqoxy5G00658 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 1.8e-102 376.7 322 59.9
CsaV3_3G017540 Cucumis sativus L. HOM05D002465 ORTHO05D008860 6.8e-102 374.8 317 61.8
PSO478G0039 Papaver somniferum HOM05D002465 ORTHO05D008860 1.1e-99 367.5 320 58.1
Nitab4.5_0004854g0030 Nicotiana tabacum HOM05D002465 ORTHO05D008860 2.4e-99 366.3 289 61.9
Peaxi162Scf00618g00066 Petunia axillaris HOM05D002465 ORTHO05D008860 3.2e-99 365.9 267 65.2
arahy.Tifrunner.gnm1.ann1.9T5AB0 Arachis hypogaea HOM05D002465 ORTHO05D008860 9.2e-99 364.4 321 60.1
Migut.F01082 Erythranthe guttata HOM05D002465 ORTHO05D008860 9.2e-99 364.4 319 58.0
SalBow2G2390 Salvia bowleyana HOM05D002465 ORTHO05D008860 4.6e-98 362.1 321 57.9
Lsat_1_v5_gn_2_131440 Lactuca sativa HOM05D002465 ORTHO05D008860 5.6e-96 355.1 321 57.3
AUR62021108 Chenopodium quinoa HOM05D002465 ORTHO05D008860 3.6e-95 352.4 265 68.3
Sc13g0009250 Simmondsia chinensis HOM05D002465 ORTHO05D008860 1.1e-94 350.9 319 56.7
HanXRQChr07g0206921 Helianthus annuus HOM05D002465 ORTHO05D008860 2.3e-94 349.7 316 56.6
Carub.0008s1297 Capsella rubella HOM05D002465 ORTHO05D008860 1.2e-93 347.4 189 91.0
TAR374G0466 Trochodendron aralioides HOM05D002465 ORTHO05D008860 2.0e-93 346.7 320 55.6
SGA_v2.0_scaffold10G05284 Striga asiatica HOM05D002465 ORTHO05D008860 5.8e-93 345.1 325 57.8
ECA238G0507 Erigeron canadensis HOM05D002465 ORTHO05D008860 1.3e-89 334.0 323 54.5
Nitab4.5_0016317g0010 Nicotiana tabacum HOM05D002465 ORTHO05D008860 2.1e-87 326.6 238 65.1
vmacro06619 Vaccinium macrocarpon HOM05D002465 ORTHO05D008860 4.7e-87 325.5 325 53.8
SEGI_38444 Sequoiadendron giganteum HOM05D002465 ORTHO05D008860 3.2e-83 312.8 324 52.2
Eucgr.L01486 Eucalyptus grandis HOM05D002465 ORTHO05D008860 1.6e-79 300.4 320 53.1
Os10g0533200 Oryza sativa ssp. japonica HOM05D002465 ORTHO05D008860 3.6e-79 299.3 322 49.7
CDE07G0391 Ceratophyllum demersum HOM05D002465 ORTHO05D008860 3.4e-77 292.7 316 49.4
ATR0661G059 Amborella trichopoda HOM05D002465 ORTHO05D008860 1.3e-76 290.8 318 51.6
unitig_26.g10201 Utricularia gibba HOM05D002465 ORTHO05D008860 2.9e-76 289.7 261 56.3
Glyma.10G230300 Glycine max HOM05D002465 ORTHO05D008860 6.4e-76 288.5 284 57.0
Zm00001eb021880 Zea mays HOM05D002465 ORTHO05D008860 1.6e-74 283.9 333 48.0
Mapoly0033s0116 Marchantia polymorpha HOM05D002465 ORTHO05D008860 2.3e-65 253.4 314 43.6
HPP92_015083 Vanilla planifolia HOM05D002465 ORTHO05D008860 3.0e-65 253.1 326 44.5
RcHm_v2.0_Chr1g0378551 Rosa chinensis HOM05D002465 ORTHO05D008860 8.1e-63 245.0 174 70.7
Lj1C1006G4 Lonicera japonica HOM05D002465 ORTHO05D005308 9.3e-59 231.5 228 55.3
Actinidia08586 Actinidia chinensis HOM05D002465 ORTHO05D008860 2.7e-58 229.9 203 55.7
HPP92_028539 Vanilla planifolia HOM05D002465 ORTHO05D008860 6.9e-54 215.3 202 54.0
CANSAT01G1695 Cannabis sativa HOM05D002465 ORTHO05D008860 3.4e-53 213.0 162 64.8
AagrBONN_evm.TU.Sc2ySwM_362.356 Anthoceros agrestis HOM05D002465 ORTHO05D008860 8.5e-44 181.8 253 41.9
Aqoxy5G00661 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 2.5e-35 153.7 109 66.1
Aqoxy5G00666 Aquilegia oxysepala HOM05D002465 ORTHO05D008860 1.2e-34 151.4 109 66.1
Pp3s46_180 Physcomitrium patens HOM05D002465 ORTHO05D028651 7.0e-30 135.6 269 31.2
Cfa016297 Carpinus fangiana HOM05D002465 ORTHO05D008860 1.2e-26 124.8 86 68.6
GSVIVG01028828001 Vitis vinifera HOM05D002465 ORTHO05D008860 2.6e-21 107.1 110 56.4
Pp3c1_3280 Physcomitrium patens HOM05D002465 ORTHO05D008860 4.5e-21 106.3 123 46.3
Actinidia34162 Actinidia chinensis HOM05D002465 ORTHO05D008860 9.4e-11 72.0 84 51.2


User provided reference genes

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