Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB04g20493 Brassica carinata HOM05D000123 ORTHO05D000064 4.4e-43 177.6 89 100.0
BcaB04g20494 Brassica carinata HOM05D000123 ORTHO05D000064 4.4e-43 177.6 89 100.0
BcaB04g20495 Brassica carinata HOM05D000123 ORTHO05D000064 4.4e-43 177.6 89 100.0
A01p32360 Brassica napus HOM05D000123 ORTHO05D000064 3.9e-36 154.5 86 89.5
BraA01t03362Z Brassica rapa HOM05D000123 ORTHO05D000064 3.9e-36 154.5 86 89.5
BcaC09g49209 Brassica carinata HOM05D000123 ORTHO05D000064 1.1e-35 152.9 86 88.4
BolC1t04096H Brassica oleracea HOM05D000123 ORTHO05D000064 1.1e-35 152.9 86 88.4
C01p41370 Brassica napus HOM05D000123 ORTHO05D000064 2.6e-35 151.8 86 87.2
Sp3g20530 Schrenkiella parvula HOM05D000123 ORTHO05D000064 9.4e-30 133.3 86 81.4
Thhalv10020829m.g Eutrema salsugineum HOM05D000123 ORTHO05D000064 2.3e-28 128.6 92 76.1
AT3G22830 Arabidopsis thaliana HOM05D000123 ORTHO05D000064 1.4e-25 119.4 89 69.7
AL3G37150 Arabidopsis lyrata HOM05D000123 ORTHO05D000064 5.9e-24 114.0 89 68.5
Carub.0003s2296 Capsella rubella HOM05D000123 ORTHO05D000064 5.9e-24 114.0 91 68.1
BcaB06g26397 Brassica carinata HOM05D000123 ORTHO05D000064 1.7e-23 112.5 89 71.9
BraA05t21477Z Brassica rapa HOM05D000123 ORTHO05D000064 1.7e-23 112.5 86 73.3
A05p25900 Brassica napus HOM05D000123 ORTHO05D000064 2.2e-23 112.1 86 73.3
BcaC05g28013 Brassica carinata HOM05D000123 ORTHO05D000064 5.0e-23 110.9 86 72.1
C05p40280 Brassica napus HOM05D000123 ORTHO05D000064 5.0e-23 110.9 86 72.1
BolC5t32770H Brassica oleracea HOM05D000123 ORTHO05D000064 5.0e-23 110.9 86 72.1
CARHR098690 Cardamine hirsuta HOM05D000123 ORTHO05D000064 1.8e-20 102.4 87 70.1
BcaB03g14649 Brassica carinata HOM05D000123 ORTHO05D000064 4.5e-16 87.8 86 61.6
BraA03t13440Z Brassica rapa HOM05D000123 ORTHO05D000064 3.6e-13 78.2 86 58.1
A03p42960 Brassica napus HOM05D000123 ORTHO05D000064 8.0e-13 77.0 86 54.7
BcaC01g03425 Brassica carinata HOM05D000123 ORTHO05D000064 4.0e-12 74.7 86 57.0
C03p52770 Brassica napus HOM05D000123 ORTHO05D000064 2.0e-11 72.4 86 55.8
Aa31LG8G9310 Aethionema arabicum HOM05D000123 ORTHO05D000064 4.4e-11 71.2 90 53.3
Manes.03G173200 Manihot esculenta HOM05D000123 ORTHO05D000064 3.1e-09 65.1 91 46.2
CSS0017445 Camellia sinensis var. sinensis HOM05D000123 ORTHO05D000064 5.4e-09 64.3 87 49.4
PGR004G1786 Punica granatum HOM05D000123 ORTHO05D000064 1.6e-08 62.8 94 41.5
Duzib212G0452 Durio zibethinus HOM05D000123 ORTHO05D000064 2.7e-08 62.0 94 45.7
Duzib151G0016 Durio zibethinus HOM05D000123 ORTHO05D000064 4.5e-08 61.2 95 45.3
THA.LOC104803048 Tarenaya hassleriana HOM05D000123 ORTHO05D000064 2.3e-07 58.9 92 47.8
Cpa.g.sc44.122 Carica papaya HOM05D000123 ORTHO05D000064 5.0e-07 57.8 89 41.6
CSS0028881 Camellia sinensis var. sinensis HOM05D000123 ORTHO05D000064 5.6e-06 54.3 95 38.9
CSS0037535 Camellia sinensis var. sinensis HOM05D000123 ORTHO05D000064 7.3e-06 53.9 95 38.9


User provided reference genes

Program Settings