Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB04g20493 Brassica carinata HOM05D000123 ORTHO05D000064 3.8e-48 194.5 97 100.0
BcaB04g20494 Brassica carinata HOM05D000123 ORTHO05D000064 3.8e-48 194.5 97 100.0
BcaB04g20495 Brassica carinata HOM05D000123 ORTHO05D000064 4.7e-43 177.6 89 100.0
A01p32360 Brassica napus HOM05D000123 ORTHO05D000064 3.4e-41 171.4 94 90.4
BraA01t03362Z Brassica rapa HOM05D000123 ORTHO05D000064 3.4e-41 171.4 94 90.4
BcaC09g49209 Brassica carinata HOM05D000123 ORTHO05D000064 9.9e-41 169.9 94 89.4
BolC1t04096H Brassica oleracea HOM05D000123 ORTHO05D000064 9.9e-41 169.9 94 89.4
C01p41370 Brassica napus HOM05D000123 ORTHO05D000064 2.2e-40 168.7 94 88.3
Sp3g20530 Schrenkiella parvula HOM05D000123 ORTHO05D000064 2.6e-33 145.2 99 79.8
Thhalv10020829m.g Eutrema salsugineum HOM05D000123 ORTHO05D000064 1.6e-30 136.0 105 72.4
BcaB06g26397 Brassica carinata HOM05D000123 ORTHO05D000064 1.1e-26 123.2 102 70.6
BraA05t21477Z Brassica rapa HOM05D000123 ORTHO05D000064 1.1e-26 123.2 99 71.7
AL3G37150 Arabidopsis lyrata HOM05D000123 ORTHO05D000064 2.4e-26 122.1 102 66.7
AT3G22830 Arabidopsis thaliana HOM05D000123 ORTHO05D000064 2.4e-26 122.1 103 66.0
Carub.0003s2296 Capsella rubella HOM05D000123 ORTHO05D000064 4.0e-26 121.3 104 65.4
A05p25900 Brassica napus HOM05D000123 ORTHO05D000064 6.9e-26 120.6 99 70.7
BcaC05g28013 Brassica carinata HOM05D000123 ORTHO05D000064 9.0e-26 120.2 99 69.7
C05p40280 Brassica napus HOM05D000123 ORTHO05D000064 9.0e-26 120.2 99 69.7
BolC5t32770H Brassica oleracea HOM05D000123 ORTHO05D000064 9.0e-26 120.2 99 69.7
CARHR098690 Cardamine hirsuta HOM05D000123 ORTHO05D000064 3.2e-23 111.7 100 68.0
BcaB03g14649 Brassica carinata HOM05D000123 ORTHO05D000064 1.4e-18 96.3 99 60.6
BraA03t13440Z Brassica rapa HOM05D000123 ORTHO05D000064 2.5e-15 85.5 99 56.6
A03p42960 Brassica napus HOM05D000123 ORTHO05D000064 5.5e-15 84.3 99 53.5
BcaC01g03425 Brassica carinata HOM05D000123 ORTHO05D000064 2.7e-14 82.0 99 55.6
C03p52770 Brassica napus HOM05D000123 ORTHO05D000064 1.3e-13 79.7 99 54.5
Aa31LG8G9310 Aethionema arabicum HOM05D000123 ORTHO05D000064 7.4e-12 73.9 100 52.0
THA.LOC104803048 Tarenaya hassleriana HOM05D000123 ORTHO05D000064 3.1e-10 68.6 107 48.6
Manes.03G173200 Manihot esculenta HOM05D000123 ORTHO05D000064 2.6e-09 65.5 92 45.7
CSS0017445 Camellia sinensis var. sinensis HOM05D000123 ORTHO05D000064 5.9e-09 64.3 87 49.4
PGR004G1786 Punica granatum HOM05D000123 ORTHO05D000064 5.9e-09 64.3 107 40.2
Duzib212G0452 Durio zibethinus HOM05D000123 ORTHO05D000064 2.2e-08 62.4 95 45.3
Duzib151G0016 Durio zibethinus HOM05D000123 ORTHO05D000064 2.9e-08 62.0 96 44.8
Cpa.g.sc44.122 Carica papaya HOM05D000123 ORTHO05D000064 6.5e-08 60.8 103 39.8
C03p52720 Brassica napus HOM05D000123 ORTHO05D000064 3.2e-07 58.5 79 50.6
BolC3t17544H Brassica oleracea HOM05D000123 ORTHO05D000064 3.2e-07 58.5 79 50.6
CSS0028881 Camellia sinensis var. sinensis HOM05D000123 ORTHO05D000064 2.1e-06 55.8 101 38.6
CSS0037535 Camellia sinensis var. sinensis HOM05D000123 ORTHO05D000064 2.7e-06 55.5 101 38.6
BcaC01g03417 Brassica carinata HOM05D000123 ORTHO05D000064 4.6e-06 54.7 72 51.4
Hma1.2p1_0760F.1_g214040 Hydrangea macrophylla HOM05D000123 ORTHO05D000064 4.6e-06 54.7 98 41.8


User provided reference genes

Program Settings