Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB04g20259 Brassica carinata HOM05D004341 ORTHO05D005075 6.4e-67 257.3 131 100.0
BcaC09g49417 Brassica carinata HOM05D004341 ORTHO05D005075 1.9e-58 229.2 132 89.4
BolC1t03652H Brassica oleracea HOM05D004341 ORTHO05D005075 7.8e-57 223.8 129 87.6
BcaB04g20244 Brassica carinata HOM05D004341 ORTHO05D005075 1.9e-55 219.2 131 87.8
Os01g0680400 Oryza sativa ssp. japonica HOM05D004341 ORTHO05D005075 1.2e-36 156.8 131 63.4
BcaB04g20257 Brassica carinata HOM05D004341 ORTHO05D005075 2.0e-36 156.0 79 97.5
Cfa001170 Carpinus fangiana HOM05D004341 ORTHO05D005075 3.4e-36 155.2 131 64.1
Lsat_1_v5_gn_4_45480 Lactuca sativa HOM05D004341 ORTHO05D005075 5.8e-36 154.5 131 64.9
QL11p010678 Quercus lobata HOM05D004341 ORTHO05D005075 5.8e-36 154.5 130 63.1
Manes.16G060700 Manihot esculenta HOM05D004341 ORTHO05D005075 9.9e-36 153.7 131 63.4
AL7G33620 Arabidopsis lyrata HOM05D004341 ORTHO05D005075 1.3e-35 153.3 131 63.4
CARHR227110 Cardamine hirsuta HOM05D004341 ORTHO05D005075 1.3e-35 153.3 131 64.1
Aa31LG9G8550 Aethionema arabicum HOM05D004341 ORTHO05D005075 1.7e-35 152.9 131 64.1
GSVIVG01038073001 Vitis vinifera HOM05D004341 ORTHO05D005075 1.7e-35 152.9 131 64.1
Carub.0007s2089 Capsella rubella HOM05D004341 ORTHO05D005075 2.2e-35 152.5 131 63.4
CiPaw.10G108700 Carya illinoinensis HOM05D004341 ORTHO05D005075 2.9e-35 152.1 131 62.6
PGR083G1473 Punica granatum HOM05D004341 ORTHO05D005075 2.9e-35 152.1 131 61.1
HanXRQChr12g0384191 Helianthus annuus HOM05D004341 ORTHO05D005075 4.9e-35 151.4 113 70.8
Sp7g18640 Schrenkiella parvula HOM05D004341 ORTHO05D005075 6.4e-35 151.0 131 62.6
AT4G20280 Arabidopsis thaliana HOM05D004341 ORTHO05D005075 8.4e-35 150.6 131 61.8
CAN.G1144.22 Capsicum annuum HOM05D004341 ORTHO05D005075 8.4e-35 150.6 113 68.1
Ciclev10016661m.g Citrus clementina HOM05D004341 ORTHO05D005075 8.4e-35 150.6 131 61.1
Nn1g09858 Nelumbo nucifera HOM05D004341 ORTHO05D005075 8.4e-35 150.6 131 62.6
CSS0011539 Camellia sinensis var. sinensis HOM05D004341 ORTHO05D005075 1.1e-34 150.2 129 64.3
ECA234G2847 Erigeron canadensis HOM05D004341 ORTHO05D005075 1.1e-34 150.2 113 69.9
Lj7A164T18 Lonicera japonica HOM05D004341 ORTHO05D005075 1.1e-34 150.2 131 63.4
Nitab4.5_0000422g0150 Nicotiana tabacum HOM05D004341 ORTHO05D005075 1.1e-34 150.2 119 64.7
BcaNung03718 Brassica carinata HOM05D004341 ORTHO05D005075 1.4e-34 149.8 131 62.6
Zm00001eb156710 Zea mays HOM05D004341 ORTHO05D005075 1.4e-34 149.8 131 60.3
BcaC09g51324 Brassica carinata HOM05D004341 ORTHO05D005075 1.9e-34 149.4 131 61.8
ClCG00G000170 Citrullus lanatus HOM05D004341 ORTHO05D005075 1.9e-34 149.4 131 60.3
ClCG10G003420 Citrullus lanatus HOM05D004341 ORTHO05D005075 1.9e-34 149.4 131 60.3
PGSC0003DMG400019653 Solanum tuberosum HOM05D004341 ORTHO05D005075 1.9e-34 149.4 113 67.3
Solyc05g010570.3 Solanum lycopersicum HOM05D004341 ORTHO05D005075 2.4e-34 149.1 113 67.3
Solyc05g018120.2 Solanum lycopersicum HOM05D004341 ORTHO05D005075 2.4e-34 149.1 113 67.3
Sopen05g006350 Solanum pennellii HOM05D004341 ORTHO05D005075 2.4e-34 149.1 113 67.3
Aqoxy4G00695 Aquilegia oxysepala HOM05D004341 ORTHO05D005075 3.2e-34 148.7 113 69.0
Potri.001G073500 Populus trichocarpa HOM05D004341 ORTHO05D005075 3.2e-34 148.7 131 61.8
MELO3C014011.2 Cucumis melo HOM05D004341 ORTHO05D005075 4.2e-34 148.3 131 60.3
Oeu062532.1 Olea europaea HOM05D004341 ORTHO05D005075 4.2e-34 148.3 129 63.6
CANSAT78G0611 Cannabis sativa HOM05D004341 ORTHO05D005075 5.4e-34 147.9 113 67.3
CDE04G3252 Ceratophyllum demersum HOM05D004341 ORTHO05D005075 5.4e-34 147.9 131 60.3
Cc09_g04540 Coffea canephora HOM05D004341 ORTHO05D005075 5.4e-34 147.9 131 61.8
Oeu020261.1 Olea europaea HOM05D004341 ORTHO05D005075 5.4e-34 147.9 131 62.6
Rhsim13G0136700 Rhododendron simsii HOM05D004341 ORTHO05D005075 5.4e-34 147.9 113 68.1
TWI15G0268 Tripterygium wilfordii HOM05D004341 ORTHO05D005075 5.4e-34 147.9 131 60.3
HPP92_006338 Vanilla planifolia HOM05D004341 ORTHO05D005075 5.4e-34 147.9 113 68.1
Thhalv10026240m.g Eutrema salsugineum HOM05D004341 ORTHO05D005075 7.1e-34 147.5 131 61.8
THA.LOC104806232 Tarenaya hassleriana HOM05D004341 ORTHO05D005075 7.1e-34 147.5 131 61.1
CSS0011039 Camellia sinensis var. sinensis HOM05D004341 ORTHO05D005075 9.3e-34 147.1 132 62.1
Duzib150G1434 Durio zibethinus HOM05D004341 ORTHO05D005075 9.3e-34 147.1 131 60.3
Hma1.2p1_0701F.1_g205915 Hydrangea macrophylla HOM05D004341 ORTHO05D005075 9.3e-34 147.1 113 69.0
Ah.07g207810 Amaranthus hybridus HOM05D004341 ORTHO05D005075 1.2e-33 146.7 122 63.9
vmacro03576 Vaccinium macrocarpon HOM05D004341 ORTHO05D005075 1.2e-33 146.7 113 67.3
CAN.G359.8 Capsicum annuum HOM05D004341 ORTHO05D005075 1.6e-33 146.4 131 61.8
Cpa.g.c30482 Carica papaya HOM05D004341 ORTHO05D005075 1.6e-33 146.4 113 69.0
Nitab4.5_0000414g0070 Nicotiana tabacum HOM05D004341 ORTHO05D005075 1.6e-33 146.4 113 67.3
Nitab4.5_0012569g0030 Nicotiana tabacum HOM05D004341 ORTHO05D005075 1.6e-33 146.4 113 67.3
Gohir.A10G168600 Gossypium hirsutum HOM05D004341 ORTHO05D005075 2.1e-33 146.0 131 60.3
BolC1t01390H Brassica oleracea HOM05D004341 ORTHO05D005075 2.7e-33 145.6 129 60.5
BraA01t01141Z Brassica rapa HOM05D004341 ORTHO05D005075 2.7e-33 145.6 129 60.5
AUR62002184 Chenopodium quinoa HOM05D004341 ORTHO05D005075 2.7e-33 145.6 113 67.3
MBI06_g30999_MAGBIO Magnolia biondii HOM05D004341 ORTHO05D005075 2.7e-33 145.6 131 59.5
Sed0011196 Sechium edule HOM05D004341 ORTHO05D005075 2.7e-33 145.6 131 58.8
A01p11990 Brassica napus HOM05D004341 ORTHO05D005075 3.5e-33 145.2 129 59.7
Haze_05182 Corylus avellana HOM05D004341 ORTHO05D005075 3.5e-33 145.2 107 71.0
Dinv17497 Davidia involucrata HOM05D004341 ORTHO05D005075 3.5e-33 145.2 130 60.8
Lj1A1153T31 Lonicera japonica HOM05D004341 ORTHO05D005075 3.5e-33 145.2 129 62.0
Peaxi162Scf00119g01515 Petunia axillaris HOM05D004341 ORTHO05D005075 4.6e-33 144.8 127 59.8
DCAR_007769 Daucus carota HOM05D004341 ORTHO05D005075 6.0e-33 144.4 107 71.0
Gohir.D13G218100 Gossypium hirsutum HOM05D004341 ORTHO05D005075 6.0e-33 144.4 131 60.3
Gorai.013G248900 Gossypium raimondii HOM05D004341 ORTHO05D005075 6.0e-33 144.4 131 60.3
C01p14250 Brassica napus HOM05D004341 ORTHO05D005075 7.9e-33 144.1 129 59.7
Lsat_1_v5_gn_3_129240 Lactuca sativa HOM05D004341 ORTHO05D005075 7.9e-33 144.1 131 59.5
SalBow5G0282 Salvia bowleyana HOM05D004341 ORTHO05D005075 7.9e-33 144.1 113 65.5
PSO017G7392 Papaver somniferum HOM05D004341 ORTHO05D005075 1.0e-32 143.7 129 61.2
RcHm_v2.0_Chr5g0022151 Rosa chinensis HOM05D004341 ORTHO05D005075 1.0e-32 143.7 113 67.3
EL10Ac3g05823 Beta vulgaris HOM05D004341 ORTHO05D005075 1.3e-32 143.3 113 66.4
Glyma.03G001900 Glycine max HOM05D004341 ORTHO05D005075 1.3e-32 143.3 131 59.5
Gorai.011G195600 Gossypium raimondii HOM05D004341 ORTHO05D005075 1.3e-32 143.3 131 59.5
Lj3g0018794 Lotus japonicus HOM05D004341 ORTHO05D005075 1.3e-32 143.3 131 59.5
Lj4g0017726 Lotus japonicus HOM05D004341 ORTHO05D005075 1.3e-32 143.3 131 59.5
AUR62015527 Chenopodium quinoa HOM05D004341 ORTHO05D005075 1.7e-32 142.9 114 65.8
TAR626G1254 Trochodendron aralioides HOM05D004341 ORTHO05D005075 1.7e-32 142.9 135 59.3
Gohir.A13G214400 Gossypium hirsutum HOM05D004341 ORTHO05D005075 2.3e-32 142.5 113 66.4
Prupe.4G121600 Prunus persica HOM05D004341 ORTHO05D005075 2.3e-32 142.5 113 66.4
SGA_v2.0_scaffold28G11752 Striga asiatica HOM05D004341 ORTHO05D005075 2.3e-32 142.5 118 61.9
Thecc.09G217200 Theobroma cacao HOM05D004341 ORTHO05D005075 2.3e-32 142.5 113 65.5
AT1G20000 Arabidopsis thaliana HOM05D004341 ORTHO05D005075 3.0e-32 142.1 130 62.3
arahy.Tifrunner.gnm1.ann1.W1Y39Q Arachis hypogaea HOM05D004341 ORTHO05D005075 3.0e-32 142.1 131 61.1
BcaB04g18416 Brassica carinata HOM05D004341 ORTHO05D005075 3.0e-32 142.1 111 68.5
FvH4_3g13420 Fragaria vesca HOM05D004341 ORTHO05D005075 3.0e-32 142.1 113 66.4
FAN21G2305 Fragaria x ananassa HOM05D004341 ORTHO05D005075 3.0e-32 142.1 113 66.4
Gohir.D10G174800 Gossypium hirsutum HOM05D004341 ORTHO05D005075 3.0e-32 142.1 131 59.5
Zm00001eb360430 Zea mays HOM05D004341 ORTHO05D005075 3.0e-32 142.1 128 57.8
arahy.Tifrunner.gnm1.ann1.22GDSE Arachis hypogaea HOM05D004341 ORTHO05D005075 3.9e-32 141.7 131 60.3
arahy.Tifrunner.gnm1.ann1.VCV969 Arachis hypogaea HOM05D004341 ORTHO05D005075 3.9e-32 141.7 131 60.3
FAN16G0631 Fragaria x ananassa HOM05D004341 ORTHO05D005075 3.9e-32 141.7 112 66.1
Sc19g0001970 Simmondsia chinensis HOM05D004341 ORTHO05D005075 3.9e-32 141.7 110 69.1
VMungo0331G0448 Vigna mungo HOM05D004341 ORTHO05D005075 3.9e-32 141.7 130 58.5
Ca_26283_v3 Cicer arietinum L. HOM05D004341 ORTHO05D005075 8.7e-32 140.6 131 58.8
MD10G1223700 Malus domestica HOM05D004341 ORTHO05D005075 1.1e-31 140.2 113 64.6
PSO210G4911 Papaver somniferum HOM05D004341 ORTHO05D005075 1.1e-31 140.2 109 67.0
ATR0737G165 Amborella trichopoda HOM05D004341 ORTHO05D005075 1.5e-31 139.8 113 64.6
AL1G32730 Arabidopsis lyrata HOM05D004341 ORTHO05D005075 1.5e-31 139.8 117 65.0
Psat6g047640 Pisum sativum HOM05D004341 ORTHO05D005075 1.5e-31 139.8 131 60.3
Hund04610 Selenicereus undatus HOM05D004341 ORTHO05D005075 1.5e-31 139.8 131 60.3
HanXRQChr13g0422931 Helianthus annuus HOM05D004341 ORTHO05D005075 1.9e-31 139.4 131 58.8
Medtr1g047200 Medicago truncatula HOM05D004341 ORTHO05D005075 1.9e-31 139.4 131 59.5
Phvul.010G058500 Phaseolus vulgaris HOM05D004341 ORTHO05D005075 1.9e-31 139.4 131 58.0
Hund11810 Selenicereus undatus HOM05D004341 ORTHO05D005075 9.6e-31 137.1 107 66.4
SHI16737 Sapria himalayana HOM05D004341 ORTHO05D005075 1.6e-30 136.3 106 67.0
Dinv14196 Davidia involucrata HOM05D009083 ORTHO05D005075 2.1e-30 136.0 107 66.4
unitig_21.g20916 Utricularia gibba HOM05D004341 ORTHO05D005075 8.1e-30 134.0 113 61.9
MSTRG.22399 Avicennia marina HOM05D004341 ORTHO05D005075 1.1e-29 133.7 119 59.7
Lalb_Chr06g0163081 Lupinus albus HOM05D004341 ORTHO05D005075 1.1e-29 133.7 132 58.3
ECA240G4781 Erigeron canadensis HOM05D006102 ORTHO05D007550 1.4e-29 133.3 119 62.2
COL.COLO4_10402 Corchorus olitorius HOM05D004341 ORTHO05D005075 2.4e-29 132.5 113 63.7
CiPaw.02G184500 Carya illinoinensis HOM05D004341 ORTHO05D005075 4.0e-29 131.7 127 55.1
Dinv05280 Davidia involucrata HOM05D004341 ORTHO05D005075 4.0e-29 131.7 131 58.0
Pp3c14_26520 Physcomitrium patens HOM05D004341 ORTHO05D005075 4.0e-29 131.7 110 60.0
QL08p059659 Quercus lobata HOM05D004341 ORTHO05D005075 5.3e-29 131.3 111 59.5
CBR_g22400 Chara braunii HOM05D004341 ORTHO05D005075 2.6e-28 129.0 109 56.9
HPP92_027866 Vanilla planifolia HOM05D004341 ORTHO05D005075 8.4e-27 124.0 97 68.0
TPR.G20753 Trifolium pratense HOM05D004341 ORTHO05D005075 2.4e-26 122.5 138 52.2
Peaxi162Scf00188g00814 Petunia axillaris HOM05D004341 ORTHO05D005075 5.5e-26 121.3 112 61.6
Eucgr.G01564 Eucalyptus grandis HOM05D004341 ORTHO05D005075 7.1e-26 120.9 96 64.6
THA.LOC104812926 Tarenaya hassleriana HOM05D004341 ORTHO05D005075 2.1e-25 119.4 131 52.7
Mapoly0006s0068 Marchantia polymorpha HOM05D004341 ORTHO05D005075 4.6e-25 118.2 110 53.6
TPR.G30192 Trifolium pratense HOM05D004341 ORTHO05D005075 3.9e-24 115.2 129 50.4
FAN07G2754 Fragaria x ananassa HOM05D004341 ORTHO05D005075 4.3e-23 111.7 111 58.6
Sabra01G0051800 Salix brachista HOM05D004341 ORTHO05D005075 6.9e-21 104.4 113 52.2
BcaB03g11664 Brassica carinata HOM05D004341 ORTHO05D005075 1.2e-20 103.6 131 51.9
Haze_17072 Corylus avellana HOM05D000046 ORTHO05D005075 1.2e-20 103.6 87 58.6
Lsat_1_v5_gn_1_77761 Lactuca sativa HOM05D004341 ORTHO05D005075 1.5e-20 103.2 106 58.5
A08p14740 Brassica napus HOM05D004341 ORTHO05D005075 5.8e-20 101.3 115 55.7
BraA08t33460Z Brassica rapa HOM05D004341 ORTHO05D005075 5.8e-20 101.3 115 55.7
SMO115G0310 Selaginella moellendorffii HOM05D004341 ORTHO05D005075 7.6e-20 100.9 105 46.7
BcaC01g00664 Brassica carinata HOM05D004341 ORTHO05D005075 2.5e-18 95.9 136 47.8
Actinidia34783 Actinidia chinensis HOM05D004341 ORTHO05D005075 1.3e-16 90.1 98 55.1
arahy.Tifrunner.gnm1.ann1.ZMN623 Arachis hypogaea HOM05D004341 ORTHO05D005075 1.1e-15 87.0 88 59.1
FAN25G3107 Fragaria x ananassa HOM05D004341 ORTHO05D005075 1.1e-15 87.0 84 58.3
Nitab4.5_0015757g0010 Nicotiana tabacum HOM05D004341 ORTHO05D005075 1.1e-15 87.0 76 64.5
FAN11G3831 Fragaria x ananassa HOM05D004341 ORTHO05D005075 2.1e-14 82.8 84 54.8
Lsat_1_v5_gn_1_1241 Lactuca sativa HOM05D004341 ORTHO05D005075 4.8e-14 81.6 88 58.0
Medtr0085s0030 Medicago truncatula HOM05D004341 ORTHO05D005075 1.8e-13 79.7 70 61.4
Cfa001469 Carpinus fangiana HOM05D001719 ORTHO05D007646 5.9e-12 74.7 73 53.4
Potri.003G157450 Populus trichocarpa HOM05D004341 ORTHO05D005075 1.3e-11 73.6 48 70.8
Cre01.g011350 Chlamydomonas reinhardtii HOM05D004341 ORTHO05D005075 1.1e-10 70.5 105 35.2
MCO01G288 Micromonas commoda HOM05D004341 ORTHO05D005075 1.1e-10 70.5 96 43.8
PRCOL_00001421 Prasinoderma coloniale HOM05D004341 ORTHO05D005075 9.3e-10 67.4 90 40.0
BcaB04g20258 Brassica carinata HOM05D026505 ORTHO05D027645 3.0e-08 62.4 37 86.5
BolC3t20569H Brassica oleracea HOM05D001435 ORTHO05D001304 9.7e-07 57.4 49 61.2
TPR.G20312 Trifolium pratense HOM05D004341 ORTHO05D005075 4.8e-06 55.1 41 56.1


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