Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB04g19629 Brassica carinata HOM05D001038 ORTHO05D000395 1.4e-170 602.8 304 100.0
BcaB08g34782 Brassica carinata HOM05D001038 ORTHO05D000395 3.5e-76 289.3 256 61.3
BcaB01g01915 Brassica carinata HOM05D001038 ORTHO05D000395 1.7e-30 137.5 230 38.3
BolC2t11293H Brassica oleracea HOM05D001038 ORTHO05D019962 1.2e-28 131.3 296 35.1
C02p52080 Brassica napus HOM05D001038 ORTHO05D019962 2.1e-28 130.6 126 52.4
BcaB08g34565 Brassica carinata HOM05D001038 ORTHO05D000395 2.7e-28 130.2 309 31.1
BcaB02g10939 Brassica carinata HOM05D001038 ORTHO05D000395 1.5e-26 124.4 292 34.9
C09p12400 Brassica napus HOM05D001038 ORTHO05D019962 5.7e-26 122.5 141 48.2
BcaB03g16260 Brassica carinata HOM05D001038 ORTHO05D019962 1.3e-25 121.3 263 33.8
BcaC04g20742 Brassica carinata HOM05D001038 ORTHO05D010763 8.2e-25 118.6 307 33.6
C09p39680 Brassica napus HOM05D001038 ORTHO05D010763 4.1e-24 116.3 134 48.5
BcaB04g18537 Brassica carinata HOM05D001038 ORTHO05D000395 2.0e-23 114.0 271 30.6
C05p37200 Brassica napus HOM05D001038 ORTHO05D017560 2.2e-22 110.5 284 31.3
BraA06t25412Z Brassica rapa HOM05D001038 ORTHO05D017560 5.0e-22 109.4 133 44.4
BcaC08g47005 Brassica carinata HOM05D001038 ORTHO05D000395 1.1e-21 108.2 193 37.8
BcaB05g25087 Brassica carinata HOM05D001038 ORTHO05D000395 1.9e-21 107.5 274 32.8
BcaB08g35416 Brassica carinata HOM05D001038 ORTHO05D017560 4.7e-20 102.8 126 44.4
BcaC09g49024 Brassica carinata HOM05D001038 ORTHO05D000395 6.1e-20 102.4 291 30.6
BcaB07g30174 Brassica carinata HOM05D001038 ORTHO05D000395 3.9e-19 99.8 223 30.5
BraA02t08905Z Brassica rapa HOM05D001038 ORTHO05D033175 3.9e-19 99.8 215 34.9
BraA01t02127Z Brassica rapa HOM05D001038 ORTHO05D019962 5.1e-19 99.4 231 33.8
BolC9t56412H Brassica oleracea HOM05D001038 ORTHO05D000395 8.8e-19 98.6 210 33.8
BcaC04g23074 Brassica carinata HOM05D001038 ORTHO05D019962 5.7e-18 95.9 197 36.5
A05p21480 Brassica napus HOM05D001038 ORTHO05D032193 7.4e-18 95.5 87 51.7
BraA05t21066Z Brassica rapa HOM05D001038 ORTHO05D032193 7.4e-18 95.5 87 51.7
BcaB06g28161 Brassica carinata HOM05D001038 ORTHO05D000395 1.3e-17 94.7 295 31.2
BcaB01g00119 Brassica carinata HOM05D001038 ORTHO05D000395 2.2e-17 94.0 206 31.6
A09p34780 Brassica napus HOM05D001038 ORTHO05D000395 1.1e-16 91.7 231 37.2
BcaC05g26744 Brassica carinata HOM05D001038 ORTHO05D000395 1.8e-16 90.9 291 31.6
BolC9t54134H Brassica oleracea HOM05D001038 ORTHO05D019962 3.1e-16 90.1 94 48.9
BcaB04g17766 Brassica carinata HOM05D001038 ORTHO05D000395 5.3e-16 89.4 242 31.0
BcaNung00229 Brassica carinata HOM05D001038 ORTHO05D000395 9.1e-16 88.6 239 31.4
A01p23200 Brassica napus HOM05D001038 ORTHO05D000395 9.1e-16 88.6 231 36.4
BcaB06g26021 Brassica carinata HOM05D001038 ORTHO05D000395 1.2e-15 88.2 227 35.2
C09p42070 Brassica napus HOM05D001038 ORTHO05D021947 1.6e-15 87.8 238 30.7
BraA02t07755Z Brassica rapa HOM05D001038 ORTHO05D000395 2.0e-15 87.4 309 31.4
BolC7t41626H Brassica oleracea HOM05D001038 ORTHO05D014932 2.6e-15 87.0 237 32.5
A01p24490 Brassica napus HOM05D001038 ORTHO05D021947 4.5e-15 86.3 291 30.6
C06p10570 Brassica napus HOM05D001038 ORTHO05D014932 1.0e-14 85.1 237 32.1
C07p11760 Brassica napus HOM05D001038 ORTHO05D024045 1.0e-14 85.1 207 30.9
BcaC05g25823 Brassica carinata HOM05D001038 ORTHO05D014932 1.3e-14 84.7 294 31.3
BcaB06g26720 Brassica carinata HOM05D001038 ORTHO05D000395 2.2e-14 84.0 131 42.0
BcaC03g17929 Brassica carinata HOM05D001038 ORTHO05D000395 5.0e-14 82.8 232 32.8
BolC1t01121H Brassica oleracea HOM05D001038 ORTHO05D040626 5.0e-14 82.8 270 26.3
C07p15560 Brassica napus HOM05D001038 ORTHO05D000395 1.5e-13 81.3 301 26.9
BraA01t02230Z Brassica rapa HOM05D001038 ORTHO05D000395 1.5e-13 81.3 131 43.5
BcaC04g21625 Brassica carinata HOM05D001038 ORTHO05D016703 4.2e-13 79.7 131 38.9
BolC9t55839H Brassica oleracea HOM05D001038 ORTHO05D016703 7.2e-13 79.0 131 38.9
C07p34820 Brassica napus HOM05D001038 ORTHO05D000395 1.2e-12 78.2 138 34.1
C09p35780 Brassica napus HOM05D001038 ORTHO05D000395 1.2e-12 78.2 210 29.0
BolC9t58942H Brassica oleracea HOM05D001038 ORTHO05D010763 1.2e-12 78.2 137 35.0
BcaB03g12379 Brassica carinata HOM05D001038 ORTHO05D000395 2.1e-12 77.4 130 40.0
BcaC06g35484 Brassica carinata HOM05D001038 ORTHO05D000395 2.1e-12 77.4 300 27.3
BcaC07g37762 Brassica carinata HOM05D001038 ORTHO05D000395 3.6e-12 76.6 134 39.6
A06p10190 Brassica napus HOM05D001038 ORTHO05D014932 3.6e-12 76.6 254 29.1
BolC8t48147H Brassica oleracea HOM05D001038 ORTHO05D000395 3.6e-12 76.6 134 39.6
BcaB08g36369 Brassica carinata HOM05D001038 ORTHO05D014932 4.7e-12 76.3 258 29.8
BcaB08g36820 Brassica carinata HOM05D001038 ORTHO05D016703 4.7e-12 76.3 131 37.4
BcaC05g28787 Brassica carinata HOM05D001038 ORTHO05D016716 8.0e-12 75.5 134 38.1
C01p21870 Brassica napus HOM05D001038 ORTHO05D041007 8.0e-12 75.5 137 38.0
BcaC08g44444 Brassica carinata HOM05D001038 ORTHO05D016716 1.0e-11 75.1 134 37.3
C09p60390 Brassica napus HOM05D001038 ORTHO05D016703 1.0e-11 75.1 131 36.6
BolC1t02113H Brassica oleracea HOM05D001038 ORTHO05D041007 1.0e-11 75.1 137 38.0
BcaB06g28131 Brassica carinata HOM05D001038 ORTHO05D000395 1.4e-11 74.7 293 29.4
BraA04t17267Z Brassica rapa HOM05D001038 ORTHO05D014932 1.8e-11 74.3 255 29.0
BcaB04g17277 Brassica carinata HOM05D001038 ORTHO05D014932 2.3e-11 73.9 248 29.4
BraA10t43039Z Brassica rapa HOM05D001038 ORTHO05D000395 2.3e-11 73.9 130 37.7
BcaC08g46978 Brassica carinata HOM05D001038 ORTHO05D032193 3.0e-11 73.6 75 46.7
A03p31860 Brassica napus HOM05D001038 ORTHO05D024045 4.0e-11 73.2 134 32.8
A03p51100 Brassica napus HOM05D001038 ORTHO05D024045 4.0e-11 73.2 134 32.8
BolC7t40492H Brassica oleracea HOM05D001038 ORTHO05D010763 5.2e-11 72.8 115 36.5
BcaB07g32737 Brassica carinata HOM05D001038 ORTHO05D000395 6.7e-11 72.4 125 34.4
A04p22180 Brassica napus HOM05D001038 ORTHO05D000395 6.7e-11 72.4 130 36.9
A09p28390 Brassica napus HOM05D001038 ORTHO05D000395 6.7e-11 72.4 305 30.2
BcaB01g01303 Brassica carinata HOM05D001038 ORTHO05D000395 8.8e-11 72.0 266 30.5
BcaB07g33632 Brassica carinata HOM05D001038 ORTHO05D016703 8.8e-11 72.0 139 36.0
BcaB02g10814 Brassica carinata HOM05D001038 ORTHO05D010946 1.1e-10 71.6 131 38.2
A05p27890 Brassica napus HOM05D005627 ORTHO05D028293 1.1e-10 71.6 262 30.2
BcaNung00468 Brassica carinata HOM05D001038 ORTHO05D000395 3.3e-10 70.1 235 29.4
BraA02t08689Z Brassica rapa HOM05D001038 ORTHO05D010763 3.3e-10 70.1 107 39.3
BcaB02g10843 Brassica carinata HOM05D001038 ORTHO05D000395 4.4e-10 69.7 234 29.5
BraA07t28076Z Brassica rapa HOM05D001038 ORTHO05D028293 4.4e-10 69.7 280 27.1
BcaB03g16578 Brassica carinata HOM05D001038 ORTHO05D000395 5.7e-10 69.3 166 32.5
A07p02760 Brassica napus HOM05D005627 ORTHO05D028293 5.7e-10 69.3 278 26.6
BraA06t25336Z Brassica rapa HOM05D001038 ORTHO05D028293 9.7e-10 68.6 250 28.0
BolC7t41688H Brassica oleracea HOM05D001038 ORTHO05D000395 1.3e-09 68.2 130 37.7
BcaB07g32567 Brassica carinata HOM05D001038 ORTHO05D010763 1.7e-09 67.8 133 34.6
BolC7t42043H Brassica oleracea HOM05D001038 ORTHO05D000395 2.2e-09 67.4 290 26.6
BcaB03g16620 Brassica carinata HOM05D001038 ORTHO05D000395 2.8e-09 67.0 86 44.2
A10p07430 Brassica napus HOM05D001038 ORTHO05D042212 3.7e-09 66.6 95 42.1
C08p05940 Brassica napus HOM05D001038 ORTHO05D024385 3.7e-09 66.6 130 37.7
BcaC06g35713 Brassica carinata HOM05D001038 ORTHO05D024045 4.8e-09 66.2 208 29.3
C07p09720 Brassica napus HOM05D001038 ORTHO05D010763 4.8e-09 66.2 130 37.7
BraA06t24545Z Brassica rapa HOM05D001038 ORTHO05D024045 4.8e-09 66.2 134 29.1
C07p12170 Brassica napus HOM05D001038 ORTHO05D010763 1.1e-08 65.1 188 31.4
BraSC36t46060Z Brassica rapa HOM05D005627 ORTHO05D042212 1.4e-08 64.7 94 41.5
C01p11550 Brassica napus HOM05D001038 ORTHO05D040626 2.4e-08 63.9 54 48.1
C02p24050 Brassica napus HOM05D001038 ORTHO05D000395 2.4e-08 63.9 205 33.2
BcaC04g20563 Brassica carinata HOM05D001038 ORTHO05D021947 3.1e-08 63.5 205 31.2
BcaC08g46980 Brassica carinata HOM05D001038 ORTHO05D000395 3.1e-08 63.5 300 26.7
BolC9t57089H Brassica oleracea HOM05D001038 ORTHO05D021947 4.1e-08 63.2 202 29.7
BolC2t11143H Brassica oleracea HOM05D001038 ORTHO05D024385 5.3e-08 62.8 188 30.9
BolC7t41410H Brassica oleracea HOM05D001038 ORTHO05D010763 7.0e-08 62.4 129 36.4
BcaB06g26982 Brassica carinata HOM05D001038 ORTHO05D000395 9.1e-08 62.0 306 26.1
BcaC04g22987 Brassica carinata HOM05D062974 ORTHO05D000395 1.2e-07 61.6 126 34.9
A02p27290 Brassica napus HOM05D001038 ORTHO05D000395 2.0e-07 60.8 302 30.1
C07p11920 Brassica napus HOM05D001038 ORTHO05D031981 2.7e-07 60.5 88 38.6
BcaB06g27965 Brassica carinata HOM05D001038 ORTHO05D000395 4.5e-07 59.7 302 26.8
BraA02t06821Z Brassica rapa HOM05D001038 ORTHO05D000395 1.7e-06 57.8 116 32.8
BolC7t41164H Brassica oleracea HOM05D001038 ORTHO05D000395 2.2e-06 57.4 117 31.6
BraA10t43660Z Brassica rapa HOM05D025413 ORTHO05D021599 3.8e-06 56.6 76 43.4


User provided reference genes

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