Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB04g18936 Brassica carinata HOM05D007717 ORTHO05D009694 3.8e-131 471.5 233 100.0
BraA07t31055Z Brassica rapa HOM05D007717 ORTHO05D009694 5.7e-119 431.0 251 87.3
A07p34270 Brassica napus HOM05D007717 ORTHO05D009694 9.8e-119 430.3 251 86.9
BolC6t39198H Brassica oleracea HOM05D007717 ORTHO05D009694 1.4e-117 426.4 254 86.2
C06p42310 Brassica napus HOM05D007717 ORTHO05D009694 2.4e-117 425.6 254 87.0
Sp6g01810 Schrenkiella parvula HOM05D007717 ORTHO05D009694 1.0e-115 420.2 250 85.2
Thhalv10028874m.g Eutrema salsugineum HOM05D007717 ORTHO05D009694 8.3e-110 400.6 251 80.1
Carub.0006s3530 Capsella rubella HOM05D007717 ORTHO05D009694 5.9e-108 394.4 249 79.5
AT4G01935 Arabidopsis thaliana HOM05D007717 ORTHO05D009694 1.3e-107 393.3 249 79.5
Aa31LG5G1580 Aethionema arabicum HOM05D007717 ORTHO05D009694 2.7e-92 342.4 257 70.4
THA.LOC104825934 Tarenaya hassleriana HOM05D007717 ORTHO05D009694 7.6e-79 297.7 236 65.7
TWI14G0584 Tripterygium wilfordii HOM05D007717 ORTHO05D009694 1.6e-76 290.0 225 62.7
Haze_17022 Corylus avellana HOM05D007717 ORTHO05D009694 4.3e-74 282.0 232 60.8
Thecc.01G318800 Theobroma cacao HOM05D007717 ORTHO05D009694 1.1e-72 277.3 249 58.6
Duzib138G0230 Durio zibethinus HOM05D007717 ORTHO05D009694 1.4e-72 276.9 224 62.5
CiPaw.08G086800 Carya illinoinensis HOM05D007717 ORTHO05D009694 2.4e-72 276.2 212 65.6
RcHm_v2.0_Chr3g0487001 Rosa chinensis HOM05D007717 ORTHO05D009694 2.0e-71 273.1 194 68.0
Cfa001519 Carpinus fangiana HOM05D007717 ORTHO05D009694 3.4e-71 272.3 223 61.4
Manes.05G012500 Manihot esculenta HOM05D007717 ORTHO05D009694 3.4e-71 272.3 209 64.1
TAR362G0991 Trochodendron aralioides HOM05D007717 ORTHO05D009694 5.8e-71 271.6 217 60.4
Actinidia17924 Actinidia chinensis HOM05D007717 ORTHO05D009694 7.6e-71 271.2 204 64.2
QL12p018825 Quercus lobata HOM05D007717 ORTHO05D009694 7.6e-71 271.2 233 57.5
Ciclev10021685m.g Citrus clementina HOM05D007717 ORTHO05D009694 1.7e-70 270.0 246 56.5
Potri.014G117500 Populus trichocarpa HOM05D007717 ORTHO05D009694 2.9e-70 269.2 204 62.7
Glyma.02G010200 Glycine max HOM05D007717 ORTHO05D009694 8.4e-70 267.7 207 61.8
Rhsim13G0002400 Rhododendron simsii HOM05D007717 ORTHO05D009694 8.4e-70 267.7 205 63.9
GSVIVG01028159001 Vitis vinifera HOM05D007717 ORTHO05D009694 1.1e-69 267.3 210 63.8
FvH4_1g26780 Fragaria vesca HOM05D007717 ORTHO05D009694 1.4e-69 266.9 197 64.0
Atru.chr5.944 Acer truncatum HOM05D007717 ORTHO05D009694 1.9e-69 266.5 245 55.9
Lj5g0017185 Lotus japonicus HOM05D007717 ORTHO05D009694 5.4e-69 265.0 189 66.1
FAN19G0412 Fragaria x ananassa HOM05D007717 ORTHO05D009694 1.6e-68 263.5 199 63.8
Prupe.3G006900 Prunus persica HOM05D007717 ORTHO05D009694 1.6e-68 263.5 217 59.0
Eucgr.K03559 Eucalyptus grandis HOM05D007717 ORTHO05D009694 2.1e-68 263.1 210 62.9
arahy.Tifrunner.gnm1.ann1.P1ZICW Arachis hypogaea HOM05D007717 ORTHO05D009694 2.7e-68 262.7 212 60.4
CSS0048227 Camellia sinensis var. sinensis HOM05D007717 ORTHO05D009694 3.5e-68 262.3 244 57.4
Hma1.2p1_0408F.1_g146470 Hydrangea macrophylla HOM05D007717 ORTHO05D009694 3.5e-68 262.3 213 59.6
Phvul.007G212300 Phaseolus vulgaris HOM05D007717 ORTHO05D009694 3.5e-68 262.3 198 63.1
Gohir.D07G134000 Gossypium hirsutum HOM05D007717 ORTHO05D009694 1.3e-67 260.4 224 60.3
Gorai.001G145600 Gossypium raimondii HOM05D007717 ORTHO05D009694 1.3e-67 260.4 224 60.3
Aqoxy2G02636 Aquilegia oxysepala HOM05D007717 ORTHO05D009694 2.3e-67 259.6 167 70.1
PSO210G2166 Papaver somniferum HOM05D007717 ORTHO05D009694 3.0e-67 259.2 214 59.8
MD09G1286700 Malus domestica HOM05D007717 ORTHO05D009694 3.9e-67 258.8 216 57.9
Medtr1g086585 Medicago truncatula HOM05D007717 ORTHO05D009694 3.9e-67 258.8 225 59.1
EL10As5g23606 Beta vulgaris HOM05D007717 ORTHO05D009694 5.1e-67 258.5 220 58.2
Lalb_Chr06g0167011 Lupinus albus HOM05D007717 ORTHO05D009694 8.7e-67 257.7 228 57.5
VMungo0720G1298 Vigna mungo HOM05D007717 ORTHO05D009694 1.9e-66 256.5 195 62.1
ClCG10G011620 Citrullus lanatus HOM05D007717 ORTHO05D009694 1.3e-65 253.8 200 63.0
Migut.N00924 Erythranthe guttata HOM05D007717 ORTHO05D009694 1.3e-65 253.8 247 55.5
CsaV3_3G026540 Cucumis sativus L. HOM05D007717 ORTHO05D009694 1.6e-65 253.4 189 65.1
Psat6g160600 Pisum sativum HOM05D007717 ORTHO05D009694 6.2e-65 251.5 256 52.7
TPR.G31750 Trifolium pratense HOM05D004146 ORTHO05D004843 1.8e-64 250.0 204 59.8
AUR62024600 Chenopodium quinoa HOM05D007717 ORTHO05D009694 2.4e-64 249.6 210 56.7
Sed0016465 Sechium edule HOM05D007717 ORTHO05D009694 2.0e-63 246.5 189 63.5
Nitab4.5_0002828g0050 Nicotiana tabacum HOM05D007717 ORTHO05D009694 3.4e-63 245.7 194 63.4
MELO3C012927.2 Cucumis melo HOM05D007717 ORTHO05D009694 5.8e-63 245.0 202 61.4
HanXRQChr04g0106271 Helianthus annuus HOM05D007717 ORTHO05D009694 2.9e-62 242.7 189 63.0
Nitab4.5_0004006g0040 Nicotiana tabacum HOM05D007717 ORTHO05D009694 4.9e-62 241.9 198 62.1
ATR0693G230 Amborella trichopoda HOM05D007717 ORTHO05D009694 6.4e-62 241.5 240 51.7
ECA236G3512 Erigeron canadensis HOM05D007717 ORTHO05D009694 6.4e-62 241.5 207 57.0
SGA_v2.0_scaffold198G41108 Striga asiatica HOM05D007717 ORTHO05D009694 1.1e-61 240.7 191 62.3
Lj2C1210T5 Lonicera japonica HOM05D007717 ORTHO05D009694 4.2e-61 238.8 179 66.5
Oeu038956.1 Olea europaea HOM05D007717 ORTHO05D009694 7.1e-61 238.0 228 53.9
MSTRG.15592 Avicennia marina HOM05D007717 ORTHO05D009694 2.7e-60 236.1 181 64.1
SalBow2G0697 Salvia bowleyana HOM05D007717 ORTHO05D009694 1.3e-59 233.8 215 55.3
unitig_748.g7768 Utricularia gibba HOM05D007717 ORTHO05D009694 1.3e-59 233.8 196 59.2
CAN.G1209.17 Capsicum annuum HOM05D007717 ORTHO05D009694 6.7e-59 231.5 205 58.5
Cc01_g21670 Coffea canephora HOM05D007717 ORTHO05D009694 1.3e-57 227.3 196 59.7
Sabra14G0087200 Salix brachista HOM05D007717 ORTHO05D009694 4.8e-57 225.3 178 60.7
AUR62011755 Chenopodium quinoa HOM05D004146 ORTHO05D004843 9.0e-56 221.1 187 56.1
COL.COLO4_23187 Corchorus olitorius HOM05D004146 ORTHO05D004843 5.8e-55 218.4 186 60.2
BcaC08g46194 Brassica carinata HOM05D007717 ORTHO05D009694 6.4e-54 214.9 109 96.3
PGR044G1932 Punica granatum HOM05D007717 ORTHO05D009694 6.4e-54 214.9 198 59.1
Os01g0252600 Oryza sativa ssp. japonica HOM05D007717 ORTHO05D009694 5.1e-51 205.3 242 47.1
Dinv00087 Davidia involucrata HOM05D007717 ORTHO05D009694 8.2e-49 198.0 118 75.4
Ah.11g049130 Amaranthus hybridus HOM05D007717 ORTHO05D009694 5.3e-48 195.3 215 48.8
BcaC08g46195 Brassica carinata HOM05D007717 ORTHO05D009694 3.4e-47 192.6 133 75.9
Zm00001eb127510 Zea mays HOM05D007717 ORTHO05D009694 3.4e-47 192.6 198 51.0
Mapoly0015s0128 Marchantia polymorpha HOM05D007717 ORTHO05D009694 1.0e-46 191.0 187 51.9
Nn3g21819 Nelumbo nucifera HOM05D007717 ORTHO05D009694 3.8e-46 189.1 199 52.8
Pp3c5_22240 Physcomitrium patens HOM05D007717 ORTHO05D009694 1.4e-45 187.2 166 56.6
AagrBONN_evm.TU.Sc2ySwM_344.3558 Anthoceros agrestis HOM05D007717 ORTHO05D009694 7.4e-42 174.9 188 49.5
SMO117G0327 Selaginella moellendorffii HOM05D007717 ORTHO05D009694 2.4e-40 169.9 187 47.1
vmacro02381 Vaccinium macrocarpon HOM05D007717 ORTHO05D009694 2.0e-39 166.8 121 67.8
Gohir.A07G129700 Gossypium hirsutum HOM05D007717 ORTHO05D009694 2.9e-38 162.9 114 69.3
Hund02948 Selenicereus undatus HOM05D007717 ORTHO05D009694 1.5e-34 150.6 146 54.8
FAN23G2736 Fragaria x ananassa HOM05D007717 ORTHO05D009694 1.1e-32 144.4 85 74.1
arahy.Tifrunner.gnm1.ann1.259I69 Arachis hypogaea HOM05D007717 ORTHO05D009694 1.7e-30 137.1 232 36.2
Actinidia37701 Actinidia chinensis HOM05D007717 ORTHO05D009694 8.5e-30 134.8 95 63.2
MBI18_g27382_MAGBIO Magnolia biondii HOM05D007717 ORTHO05D009694 4.2e-29 132.5 241 35.3
CARHR249750 Cardamine hirsuta HOM05D007717 ORTHO05D009694 7.2e-21 105.1 94 59.6
Cpa.g.sc18.99 Carica papaya HOM05D007717 ORTHO05D009694 2.0e-15 87.0 113 44.2
FAN28G2335 Fragaria x ananassa HOM05D007717 ORTHO05D009694 2.9e-14 83.2 107 44.9
Cre17.g729900 Chlamydomonas reinhardtii HOM05D007717 ORTHO05D009694 1.5e-13 80.9 159 35.8
Sc17g0000260 Simmondsia chinensis HOM05D007717 ORTHO05D009694 7.2e-13 78.6 172 35.5


User provided reference genes

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