Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB03g15871 Brassica carinata HOM05D001038 ORTHO05D027789 2.5e-87 325.5 169 100.0
BcaB01g01915 Brassica carinata HOM05D001038 ORTHO05D000395 1.1e-60 236.9 144 85.4
C02p52080 Brassica napus HOM05D001038 ORTHO05D019962 6.1e-46 188.0 167 62.3
BolC2t11293H Brassica oleracea HOM05D001038 ORTHO05D019962 6.1e-46 188.0 167 62.3
A01p01820 Brassica napus HOM05D001038 ORTHO05D000395 8.0e-46 187.6 153 65.4
BolC3t18949H Brassica oleracea HOM05D001038 ORTHO05D000395 1.4e-45 186.8 152 65.1
BcaB05g25087 Brassica carinata HOM05D001038 ORTHO05D000395 3.0e-45 185.7 163 59.5
A09p28390 Brassica napus HOM05D001038 ORTHO05D000395 3.0e-45 185.7 174 60.9
C06p03930 Brassica napus HOM05D001038 ORTHO05D000395 3.0e-45 185.7 168 61.3
BraA05t20300Z Brassica rapa HOM05D001038 ORTHO05D000395 1.5e-44 183.3 169 59.8
BcaC04g21093 Brassica carinata HOM05D001038 ORTHO05D000395 5.7e-44 181.4 153 64.7
BcaB06g26982 Brassica carinata HOM05D001038 ORTHO05D000395 1.1e-42 177.2 163 58.3
BcaC08g46980 Brassica carinata HOM05D001038 ORTHO05D000395 7.0e-42 174.5 153 59.5
C09p35780 Brassica napus HOM05D001038 ORTHO05D000395 1.6e-41 173.3 164 60.4
BolC9t56412H Brassica oleracea HOM05D001038 ORTHO05D000395 1.6e-41 173.3 164 60.4
BcaB08g34782 Brassica carinata HOM05D001038 ORTHO05D000395 5.9e-41 171.4 144 62.5
A01p24490 Brassica napus HOM05D001038 ORTHO05D021947 2.9e-40 169.1 156 60.9
BcaC05g25823 Brassica carinata HOM05D001038 ORTHO05D014932 8.6e-40 167.5 144 62.5
C09p52160 Brassica napus HOM05D001038 ORTHO05D000395 8.6e-40 167.5 165 57.0
BolC9t58082H Brassica oleracea HOM05D001038 ORTHO05D000395 8.6e-40 167.5 165 57.0
BcaC04g20563 Brassica carinata HOM05D001038 ORTHO05D021947 1.5e-39 166.8 152 61.8
BcaB01g00832 Brassica carinata HOM05D001038 ORTHO05D000395 3.3e-39 165.6 143 59.4
BcaC03g17929 Brassica carinata HOM05D001038 ORTHO05D000395 9.5e-39 164.1 166 54.8
BcaB03g16260 Brassica carinata HOM05D001038 ORTHO05D019962 1.2e-38 163.7 153 60.1
C09p42070 Brassica napus HOM05D001038 ORTHO05D021947 2.1e-38 162.9 152 61.2
BraA06t24710Z Brassica rapa HOM05D001038 ORTHO05D000395 2.1e-38 162.9 153 60.8
C01p11550 Brassica napus HOM05D001038 ORTHO05D040626 2.3e-37 159.5 153 58.2
BolC7t42043H Brassica oleracea HOM05D001038 ORTHO05D000395 6.8e-37 157.9 165 54.5
A09p34780 Brassica napus HOM05D001038 ORTHO05D000395 1.5e-36 156.8 144 58.3
BcaB08g34565 Brassica carinata HOM05D001038 ORTHO05D000395 7.5e-36 154.5 164 52.4
BcaB01g01303 Brassica carinata HOM05D001038 ORTHO05D000395 9.8e-36 154.1 144 59.0
A01p23200 Brassica napus HOM05D001038 ORTHO05D000395 9.8e-36 154.1 168 51.2
A01p25970 Brassica napus HOM05D001038 ORTHO05D027789 9.8e-36 154.1 140 60.0
BcaB06g27965 Brassica carinata HOM05D001038 ORTHO05D000395 2.2e-35 152.9 144 56.9
BcaNung00229 Brassica carinata HOM05D001038 ORTHO05D000395 3.7e-35 152.1 144 59.7
BcaB02g10843 Brassica carinata HOM05D001038 ORTHO05D000395 6.3e-35 151.4 144 57.6
BraA02t06493Z Brassica rapa HOM05D001038 ORTHO05D000395 8.3e-35 151.0 173 49.1
BcaB06g26021 Brassica carinata HOM05D001038 ORTHO05D000395 1.1e-34 150.6 144 56.9
BcaB07g30174 Brassica carinata HOM05D001038 ORTHO05D000395 1.1e-34 150.6 158 55.7
BraA09t36747Z Brassica rapa HOM05D001038 ORTHO05D000395 1.4e-34 150.2 167 51.5
BcaB04g17766 Brassica carinata HOM05D001038 ORTHO05D000395 1.8e-34 149.8 144 59.0
BcaB03g12379 Brassica carinata HOM05D001038 ORTHO05D000395 2.4e-34 149.4 137 59.1
C07p15560 Brassica napus HOM05D001038 ORTHO05D000395 7.0e-34 147.9 188 47.3
BraA04t16494Z Brassica rapa HOM05D001038 ORTHO05D021947 7.0e-34 147.9 166 53.0
BcaB03g16578 Brassica carinata HOM05D001038 ORTHO05D000395 1.2e-33 147.1 158 54.4
BraA01t02516Z Brassica rapa HOM05D001038 ORTHO05D027789 2.7e-33 146.0 141 57.4
BraA05t21706Z Brassica rapa HOM05D001038 ORTHO05D019929 7.8e-33 144.4 152 52.6
BcaC03g15415 Brassica carinata HOM05D001038 ORTHO05D000395 1.3e-32 143.7 158 53.8
BcaC07g37762 Brassica carinata HOM05D001038 ORTHO05D000395 3.9e-32 142.1 140 55.0
BolC8t48147H Brassica oleracea HOM05D001038 ORTHO05D000395 3.9e-32 142.1 140 55.0
A02p27290 Brassica napus HOM05D001038 ORTHO05D000395 6.6e-32 141.4 158 52.5
BolC7t42716H Brassica oleracea HOM05D001038 ORTHO05D019929 6.6e-32 141.4 152 51.3
BraA02t07755Z Brassica rapa HOM05D001038 ORTHO05D000395 6.6e-32 141.4 158 52.5
C02p45440 Brassica napus HOM05D001038 ORTHO05D000395 8.6e-32 141.0 126 59.5
C08p05950 Brassica napus HOM05D001038 ORTHO05D000395 1.1e-31 140.6 159 52.2
BolC6t38914H Brassica oleracea HOM05D001038 ORTHO05D000395 1.5e-31 140.2 159 51.6
A02p12560 Brassica napus HOM05D001038 ORTHO05D019929 1.9e-31 139.8 159 51.6
BraA10t43452Z Brassica rapa HOM05D001038 ORTHO05D019929 1.9e-31 139.8 159 51.6
BcaC08g47005 Brassica carinata HOM05D001038 ORTHO05D000395 4.0e-29 132.1 162 47.5
BraSC36t46061Z Brassica rapa HOM05D001038 ORTHO05D000395 8.9e-29 131.0 154 50.6
BraA02t08907Z Brassica rapa HOM05D001038 ORTHO05D000395 2.0e-28 129.8 120 58.3
A04p11380 Brassica napus HOM05D001038 ORTHO05D000395 2.6e-28 129.4 124 56.5
BolC6t36138H Brassica oleracea HOM05D001038 ORTHO05D014932 2.6e-28 129.4 117 60.7
BraA04t16800Z Brassica rapa HOM05D001038 ORTHO05D000395 2.6e-28 129.4 124 56.5
BolC7t41684H Brassica oleracea HOM05D001038 ORTHO05D010763 9.8e-28 127.5 154 50.0
BcaB04g18537 Brassica carinata HOM05D001038 ORTHO05D000395 2.2e-27 126.3 147 53.7
C07p12170 Brassica napus HOM05D001038 ORTHO05D010763 2.2e-27 126.3 152 49.3
C06p38180 Brassica napus HOM05D001038 ORTHO05D000395 6.4e-27 124.8 161 47.8
BraA07t28816Z Brassica rapa HOM05D001038 ORTHO05D000395 6.4e-27 124.8 154 48.7
BcaC04g23074 Brassica carinata HOM05D001038 ORTHO05D019962 8.3e-27 124.4 120 55.0
BcaB02g11159 Brassica carinata HOM05D001038 ORTHO05D000395 1.4e-26 123.6 115 53.9
A08p07690 Brassica napus HOM05D012553 ORTHO05D014953 1.9e-26 123.2 119 58.0
BcaC06g35484 Brassica carinata HOM05D001038 ORTHO05D000395 3.2e-26 122.5 115 56.5
BraA08t32783Z Brassica rapa HOM05D001038 ORTHO05D014953 3.2e-26 122.5 106 59.4
C03p74230 Brassica napus HOM05D001038 ORTHO05D000395 7.0e-26 121.3 90 75.6
BcaB02g10939 Brassica carinata HOM05D001038 ORTHO05D000395 2.0e-25 119.8 151 47.7
C09p39690 Brassica napus HOM05D001038 ORTHO05D000395 3.5e-25 119.0 82 80.5
BolC9t56849H Brassica oleracea HOM05D001038 ORTHO05D000395 3.5e-25 119.0 82 80.5
BcaB06g26720 Brassica carinata HOM05D001038 ORTHO05D000395 4.6e-25 118.6 121 52.9
C09p12410 Brassica napus HOM05D001038 ORTHO05D014953 4.6e-25 118.6 108 57.4
BolC7t41881H Brassica oleracea HOM05D001038 ORTHO05D000395 4.6e-25 118.6 171 44.4
BcaC01g02304 Brassica carinata HOM05D001038 ORTHO05D000395 7.8e-25 117.9 104 58.7
BcaB03g16061 Brassica carinata HOM05D001038 ORTHO05D000395 1.0e-24 117.5 123 51.2
BcaC05g26744 Brassica carinata HOM05D001038 ORTHO05D000395 1.0e-24 117.5 138 47.8
BcaB06g28131 Brassica carinata HOM05D001038 ORTHO05D000395 1.7e-24 116.7 123 49.6
C08p22730 Brassica napus HOM05D001038 ORTHO05D016776 1.7e-24 116.7 153 49.0
BraSC37t46126Z Brassica rapa HOM05D001038 ORTHO05D016776 3.9e-24 115.5 158 48.7
BcaC09g49024 Brassica carinata HOM05D001038 ORTHO05D000395 8.6e-24 114.4 104 58.7
BolC3t19681H Brassica oleracea HOM05D001038 ORTHO05D000395 8.6e-24 114.4 89 70.8
BolC7t43636H Brassica oleracea HOM05D001038 ORTHO05D000395 1.9e-23 113.2 144 49.3
BcaC04g19622 Brassica carinata HOM05D001038 ORTHO05D000395 2.5e-23 112.8 104 55.8
BcaC04g20742 Brassica carinata HOM05D001038 ORTHO05D010763 5.6e-23 111.7 95 61.1
BraA05t21228Z Brassica rapa HOM05D001038 ORTHO05D018589 1.2e-22 110.5 170 42.9
Thhalv10002173m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 2.8e-22 109.4 196 37.8
BcaC08g43120 Brassica carinata HOM05D001038 ORTHO05D032078 4.7e-22 108.6 120 50.0
BcaB03g16620 Brassica carinata HOM05D001038 ORTHO05D000395 8.0e-22 107.8 141 44.7
Thhalv10009967m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 8.0e-22 107.8 159 42.1
BcaB01g00119 Brassica carinata HOM05D001038 ORTHO05D000395 4.0e-21 105.5 165 45.5
A10p17410 Brassica napus HOM05D001038 ORTHO05D000395 4.0e-21 105.5 154 46.8
BcaC08g46850 Brassica carinata HOM05D001038 ORTHO05D000395 1.2e-20 104.0 151 43.7
BraA08t34217Z Brassica rapa HOM05D001038 ORTHO05D016716 1.2e-20 104.0 162 44.4
C07p34820 Brassica napus HOM05D001038 ORTHO05D000395 2.0e-20 103.2 154 46.1
BraA02t06821Z Brassica rapa HOM05D001038 ORTHO05D000395 2.0e-20 103.2 147 45.6
Thhalv10002771m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 2.0e-20 103.2 184 38.6
BraA09t41072Z Brassica rapa HOM05D001038 ORTHO05D000395 3.4e-20 102.4 145 39.3
BcaB05g23512 Brassica carinata HOM05D001038 ORTHO05D000395 4.4e-20 102.1 89 62.9
A01p38280 Brassica napus HOM05D001038 ORTHO05D000395 4.4e-20 102.1 169 37.3
Thhalv10002975m.g Eutrema salsugineum HOM05D001038 ORTHO05D000395 4.4e-20 102.1 164 40.9
BolC7t44008H Brassica oleracea HOM05D001038 ORTHO05D000395 5.8e-20 101.7 154 45.5
BraA03t13820Z Brassica rapa HOM05D001038 ORTHO05D000395 7.5e-20 101.3 81 69.1
C05p48930 Brassica napus HOM05D001038 ORTHO05D016716 9.8e-20 100.9 162 42.0
BolC5t33633H Brassica oleracea HOM05D001038 ORTHO05D016716 9.8e-20 100.9 162 42.0
C05p36690 Brassica napus HOM05D001038 ORTHO05D000395 1.3e-19 100.5 162 41.4
A05p23600 Brassica napus HOM05D001038 ORTHO05D018589 1.7e-19 100.1 189 38.6
C06p18900 Brassica napus HOM05D001038 ORTHO05D016716 6.4e-19 98.2 162 41.4
Thhalv10003372m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 6.4e-19 98.2 166 40.4
A04p22180 Brassica napus HOM05D001038 ORTHO05D000395 8.3e-19 97.8 169 41.4
A10p07420 Brassica napus HOM05D001038 ORTHO05D000395 8.3e-19 97.8 86 65.1
BraA10t43039Z Brassica rapa HOM05D001038 ORTHO05D000395 1.1e-18 97.4 169 41.4
BcaNung00468 Brassica carinata HOM05D001038 ORTHO05D000395 1.9e-18 96.7 113 40.7
BcaC06g33611 Brassica carinata HOM05D001038 ORTHO05D000395 2.4e-18 96.3 84 63.1
A10p12170 Brassica napus HOM05D001038 ORTHO05D027789 3.2e-18 95.9 80 66.2
BolC5t32403H Brassica oleracea HOM05D001038 ORTHO05D016716 3.2e-18 95.9 162 42.0
C07p21850 Brassica napus HOM05D001038 ORTHO05D019929 4.1e-18 95.5 123 43.1
BcaC05g27733 Brassica carinata HOM05D001038 ORTHO05D000395 9.2e-18 94.4 66 78.8
C05p37210 Brassica napus HOM05D001038 ORTHO05D000395 9.2e-18 94.4 66 78.8
C07p12210 Brassica napus HOM05D001038 ORTHO05D040877 1.6e-17 93.6 131 43.5
Thhalv10029129m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 2.1e-17 93.2 176 36.4
BolC7t41688H Brassica oleracea HOM05D001038 ORTHO05D000395 4.6e-17 92.0 154 39.6
BcaB06g28161 Brassica carinata HOM05D001038 ORTHO05D000395 6.0e-17 91.7 138 42.8
BcaB08g35144 Brassica carinata HOM05D001038 ORTHO05D021599 3.0e-16 89.4 169 36.7
BraA05t21309Z Brassica rapa HOM05D001038 ORTHO05D000395 5.1e-16 88.6 123 43.1
C09p45390 Brassica napus HOM05D001038 ORTHO05D024072 6.6e-16 88.2 123 48.0
BraA05t20013Z Brassica rapa HOM05D001038 ORTHO05D000395 8.6e-16 87.8 64 76.6
C07p07480 Brassica napus HOM05D001038 ORTHO05D000395 4.3e-15 85.5 147 39.5
BolC7t41164H Brassica oleracea HOM05D001038 ORTHO05D000395 4.3e-15 85.5 147 39.5
C03p52030 Brassica napus HOM05D001038 ORTHO05D000395 1.6e-14 83.6 64 68.8
BolC3t17485H Brassica oleracea HOM05D001038 ORTHO05D000395 1.6e-14 83.6 64 68.8
BolC7t42338H Brassica oleracea HOM05D001038 ORTHO05D000395 1.6e-14 83.6 80 60.0
C07p18280 Brassica napus HOM05D001038 ORTHO05D000395 2.1e-14 83.2 80 60.0
BcaC06g34271 Brassica carinata HOM05D001038 ORTHO05D000395 2.8e-14 82.8 66 68.2
BolC1t03990H Brassica oleracea HOM05D001038 ORTHO05D000395 2.8e-14 82.8 171 34.5
C04p40310 Brassica napus HOM05D001038 ORTHO05D033058 3.6e-14 82.4 95 55.8
BolC4t25611H Brassica oleracea HOM05D001038 ORTHO05D033058 3.6e-14 82.4 95 55.8
BolC8t47777H Brassica oleracea HOM05D001038 ORTHO05D014953 3.6e-14 82.4 69 63.8
A07p07700 Brassica napus HOM05D001038 ORTHO05D041939 6.2e-14 81.6 89 51.7
BolC2t08169H Brassica oleracea HOM05D001038 ORTHO05D010946 1.1e-13 80.9 171 35.1
BolC2t11144H Brassica oleracea HOM05D001038 ORTHO05D040877 1.1e-13 80.9 128 42.2
BraA06t25409Z Brassica rapa HOM05D001038 ORTHO05D000395 8.9e-13 77.8 80 58.8
BraA07t28562Z Brassica rapa HOM05D001038 ORTHO05D041939 8.9e-13 77.8 131 39.7
BcaC09g51573 Brassica carinata HOM05D001038 ORTHO05D000395 1.2e-12 77.4 170 33.5
BcaB08g34843 Brassica carinata HOM05D001038 ORTHO05D010946 1.5e-12 77.0 162 35.2
C09p22250 Brassica napus HOM05D001038 ORTHO05D000395 1.5e-12 77.0 170 33.5
BolC9t57409H Brassica oleracea HOM05D001038 ORTHO05D024072 1.5e-12 77.0 114 45.6
BolC4t27362H Brassica oleracea HOM05D001038 ORTHO05D000395 7.5e-12 74.7 86 57.0
BcaB05g21586 Brassica carinata HOM05D001038 ORTHO05D000395 1.3e-11 73.9 172 33.1
BraA07t28383Z Brassica rapa HOM05D001038 ORTHO05D032078 1.3e-11 73.9 84 47.6
BNapus_Darmor_BZH_scaffold_103p00080 Brassica napus HOM05D001038 ORTHO05D000395 2.9e-11 72.8 69 60.9
A03p68060 Brassica napus HOM05D001038 ORTHO05D000395 4.9e-11 72.0 139 36.0
BolC9t55839H Brassica oleracea HOM05D001038 ORTHO05D016703 2.4e-10 69.7 144 35.4
C06p10570 Brassica napus HOM05D001038 ORTHO05D014932 5.4e-10 68.6 60 55.0
AL8G20830 Arabidopsis lyrata HOM05D001038 ORTHO05D000395 7.1e-10 68.2 172 33.7
BolC5t32608H Brassica oleracea HOM05D001038 ORTHO05D000395 7.1e-10 68.2 168 30.4
BolC6t36762H Brassica oleracea HOM05D001038 ORTHO05D000395 9.2e-10 67.8 57 71.9
BolC8t47295H Brassica oleracea HOM05D001038 ORTHO05D000395 3.5e-09 65.9 142 33.1
C05p38680 Brassica napus HOM05D001038 ORTHO05D000395 4.6e-09 65.5 172 30.2
BcaC06g35567 Brassica carinata HOM05D001038 ORTHO05D000395 7.8e-09 64.7 122 37.7
C05p42760 Brassica napus HOM05D001038 ORTHO05D031796 1.3e-08 63.9 184 31.0
BolC2t11347H Brassica oleracea HOM05D001038 ORTHO05D000395 1.3e-08 63.9 158 31.0
Carub.0013s0014 Capsella rubella HOM05D001038 ORTHO05D000395 1.3e-08 63.9 145 31.7
C09p60390 Brassica napus HOM05D001038 ORTHO05D016703 2.3e-08 63.2 144 33.3
C08p09290 Brassica napus HOM05D001038 ORTHO05D102442 5.1e-08 62.0 46 67.4
BcaB06g28542 Brassica carinata HOM05D001038 ORTHO05D000395 6.6e-08 61.6 162 30.2
BcaB07g33657 Brassica carinata HOM05D000428 ORTHO05D000582 6.6e-08 61.6 130 36.2
BcaC05g28246 Brassica carinata HOM05D001038 ORTHO05D031796 6.6e-08 61.6 146 33.6
C02p30270 Brassica napus HOM05D001038 ORTHO05D000395 6.6e-08 61.6 37 89.2
C07p60310 Brassica napus HOM05D001038 ORTHO05D000395 6.6e-08 61.6 153 32.0
BcaC06g33888 Brassica carinata HOM05D001038 ORTHO05D017617 1.1e-07 60.8 170 28.8
BraA05t19810Z Brassica rapa HOM05D001038 ORTHO05D016703 1.9e-07 60.1 117 36.8
BraA07t28563Z Brassica rapa HOM05D001038 ORTHO05D000395 5.6e-07 58.5 37 86.5
BraA04t16611Z Brassica rapa HOM05D001038 ORTHO05D033058 9.5e-07 57.8 38 76.3
BolC3t15494H Brassica oleracea HOM05D001038 ORTHO05D010946 1.2e-06 57.4 158 31.6
BcaB01g02416 Brassica carinata HOM05D011654 ORTHO05D010946 2.1e-06 56.6 140 29.3
Thhalv10000713m.g Eutrema salsugineum HOM05D001038 ORTHO05D000395 2.8e-06 56.2 141 30.5
C01p43230 Brassica napus HOM05D001038 ORTHO05D032341 3.6e-06 55.8 59 50.8
C09p37880 Brassica napus HOM05D001038 ORTHO05D000395 3.6e-06 55.8 144 29.9
BolC9t56621H Brassica oleracea HOM05D001038 ORTHO05D000395 3.6e-06 55.8 144 29.9
C07p13440 Brassica napus HOM05D001038 ORTHO05D016703 4.7e-06 55.5 117 35.0
BolC7t41839H Brassica oleracea HOM05D001038 ORTHO05D016703 4.7e-06 55.5 117 35.0
A03p68390 Brassica napus HOM05D016987 ORTHO05D010763 8.1e-06 54.7 47 59.6
A05p28250 Brassica napus HOM05D001038 ORTHO05D019929 8.1e-06 54.7 86 37.2
BraA01t02618Z Brassica rapa HOM05D016987 ORTHO05D010763 8.1e-06 54.7 47 59.6


User provided reference genes

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