Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB03g14322 Brassica carinata HOM05D005865 ORTHO05D006867 7.5e-86 320.5 161 100.0
A07p15800 Brassica napus HOM05D005865 ORTHO05D006867 1.3e-56 223.4 154 77.3
BraA07t29307Z Brassica rapa HOM05D005865 ORTHO05D006867 1.8e-55 219.5 154 76.6
Thhalv10007426m.g Eutrema salsugineum HOM05D005865 ORTHO05D006867 3.8e-53 211.8 155 73.5
Sp1g18130 Schrenkiella parvula HOM05D005865 ORTHO05D006867 1.1e-52 210.3 155 72.9
BraA06t24751Z Brassica rapa HOM05D005865 ORTHO05D006867 7.1e-52 207.6 153 71.9
BcaB07g32044 Brassica carinata HOM05D005865 ORTHO05D006867 9.3e-52 207.2 163 70.6
C07p23040 Brassica napus HOM05D005865 ORTHO05D006867 1.6e-51 206.5 150 78.0
BolC7t42845H Brassica oleracea HOM05D005865 ORTHO05D006867 1.6e-51 206.5 150 78.0
A07p15690 Brassica napus HOM05D005865 ORTHO05D006867 1.1e-49 200.3 129 79.8
AL1G33330 Arabidopsis lyrata HOM05D005865 ORTHO05D006867 2.5e-49 199.1 155 71.0
Carub.0001s1989 Capsella rubella HOM05D005865 ORTHO05D006867 3.3e-49 198.7 155 69.7
CARHR020860 Cardamine hirsuta HOM05D005865 ORTHO05D006867 4.3e-49 198.4 155 69.0
AL1G33260 Arabidopsis lyrata HOM05D005865 ORTHO05D006867 7.4e-49 197.6 155 69.0
AT1G20410 Arabidopsis thaliana HOM05D005865 ORTHO05D006867 1.6e-48 196.4 155 68.4
BcaC05g25951 Brassica carinata HOM05D005865 ORTHO05D006867 6.9e-47 191.0 149 70.5
C05p19010 Brassica napus HOM05D005865 ORTHO05D006867 6.9e-47 191.0 149 70.5
BolC5t30602H Brassica oleracea HOM05D005865 ORTHO05D006867 2.0e-46 189.5 149 70.5
BcaNung03380 Brassica carinata HOM05D005865 ORTHO05D006867 2.6e-46 189.1 149 73.2
Aa31LG7G4730 Aethionema arabicum HOM05D005865 ORTHO05D006867 2.4e-44 182.6 155 62.6
THA.LOC104813767 Tarenaya hassleriana HOM05D005865 ORTHO05D006867 2.4e-31 139.4 124 58.1
Cpa.g.sc26.237 Carica papaya HOM05D005865 ORTHO05D006867 2.6e-22 109.4 137 46.0
Potri.005G247500 Populus trichocarpa HOM05D005865 ORTHO05D006867 7.7e-22 107.8 134 43.3
Actinidia37960 Actinidia chinensis HOM05D005865 ORTHO05D006867 1.7e-21 106.7 158 36.7
Atru.chr13.184 Acer truncatum HOM05D005865 ORTHO05D006867 6.5e-21 104.8 124 48.4
Sabra05G0191400 Salix brachista HOM05D005865 ORTHO05D006867 6.5e-21 104.8 134 43.3
GSVIVG01008710001 Vitis vinifera HOM05D005865 ORTHO05D006867 1.9e-20 103.2 149 41.6
TWI36G0296 Tripterygium wilfordii HOM05D005865 ORTHO05D006867 2.5e-20 102.8 156 39.7
TAR381G0423 Trochodendron aralioides HOM05D005865 ORTHO05D006867 3.2e-20 102.4 161 41.0
vmacro04388 Vaccinium macrocarpon HOM05D005865 ORTHO05D006867 7.2e-20 101.3 174 36.2
DCAR_013898 Daucus carota HOM05D005865 ORTHO05D006867 1.6e-19 100.1 147 42.2
Rhsim07G0252700 Rhododendron simsii HOM05D005865 ORTHO05D006867 2.1e-19 99.8 161 36.6
QL02p013522 Quercus lobata HOM05D005865 ORTHO05D006867 6.1e-19 98.2 145 41.4
MD08G1005300 Malus domestica HOM05D005865 ORTHO05D006867 1.0e-18 97.4 151 38.4
Hma1.2p1_1100F.1_g257160 Hydrangea macrophylla HOM05D005865 ORTHO05D006867 1.4e-18 97.1 146 42.5
Nn5g30889 Nelumbo nucifera HOM05D005865 ORTHO05D006867 1.4e-18 97.1 153 37.3
PSO541G4963 Papaver somniferum HOM05D005865 ORTHO05D006867 2.3e-18 96.3 144 40.3
Dinv31911 Davidia involucrata HOM05D005865 ORTHO05D006867 6.7e-18 94.7 163 34.4
Gohir.D05G184600 Gossypium hirsutum HOM05D005865 ORTHO05D006867 2.0e-17 93.2 135 41.5
Solyc04g082130.4 Solanum lycopersicum HOM05D005865 ORTHO05D006867 2.6e-17 92.8 140 39.3
FAN27G0680 Fragaria x ananassa HOM05D005865 ORTHO05D006867 3.3e-17 92.4 140 39.3
Sopen04g035760 Solanum pennellii HOM05D005865 ORTHO05D006867 3.3e-17 92.4 140 39.3
PSO675G0073 Papaver somniferum HOM05D005865 ORTHO05D006867 4.4e-17 92.0 130 40.8
Hund05136 Selenicereus undatus HOM05D005865 ORTHO05D006867 4.4e-17 92.0 144 35.4
Gorai.009G190100 Gossypium raimondii HOM05D005865 ORTHO05D006867 5.7e-17 91.7 135 41.5
PGSC0003DMG400009964 Solanum tuberosum HOM05D005865 ORTHO05D006867 5.7e-17 91.7 140 38.6
Thecc.08G054600 Theobroma cacao HOM05D005865 ORTHO05D006867 5.7e-17 91.7 165 39.4
FvH4_2g37810 Fragaria vesca HOM05D005865 ORTHO05D006867 1.3e-16 90.5 140 38.6
AUR62036767 Chenopodium quinoa HOM05D005865 ORTHO05D006867 1.7e-16 90.1 139 39.6
FAN15G0850 Fragaria x ananassa HOM05D005865 ORTHO05D006867 2.8e-16 89.4 151 38.4
MSTRG.1133 Avicennia marina HOM05D005865 ORTHO05D006867 4.8e-16 88.6 169 34.3
Nitab4.5_0000588g0310 Nicotiana tabacum HOM05D005865 ORTHO05D006867 4.8e-16 88.6 147 34.7
Gohir.A05G181600 Gossypium hirsutum HOM05D005865 ORTHO05D006867 6.3e-16 88.2 135 40.0
Cfa014029 Carpinus fangiana HOM05D005865 ORTHO05D006867 1.1e-15 87.4 136 40.4
Migut.N03192 Erythranthe guttata HOM05D005865 ORTHO05D006867 1.1e-15 87.4 142 38.7
Eucgr.F03532 Eucalyptus grandis HOM05D005865 ORTHO05D006867 1.1e-15 87.4 148 38.5
Ah.00g000500 Amaranthus hybridus HOM05D005865 ORTHO05D006867 1.4e-15 87.0 139 38.8
Ciclev10000742m.g Citrus clementina HOM05D005865 ORTHO05D006867 1.8e-15 86.7 131 38.9
CSS0021595 Camellia sinensis var. sinensis HOM05D005865 ORTHO05D006867 2.4e-15 86.3 127 36.2
Cc10_g00980 Coffea canephora HOM05D005865 ORTHO05D006867 2.4e-15 86.3 170 32.9
Oeu025004.1 Olea europaea HOM05D005865 ORTHO05D006867 2.4e-15 86.3 142 38.7
SGA_v2.0_scaffold25G11198 Striga asiatica HOM05D005865 ORTHO05D006867 3.1e-15 85.9 167 36.5
SHI04100 Sapria himalayana HOM05D005865 ORTHO05D006867 5.3e-15 85.1 116 44.8
AUR62013839 Chenopodium quinoa HOM05D005865 ORTHO05D006867 2.0e-14 83.2 138 38.4
Peaxi162Scf00174g01413 Petunia axillaris HOM05D005865 ORTHO05D006867 2.0e-14 83.2 149 34.2
CiPaw.07G141800 Carya illinoinensis HOM05D005865 ORTHO05D006867 2.6e-14 82.8 155 36.8
PGR031G3425 Punica granatum HOM05D005865 ORTHO05D006867 2.6e-14 82.8 139 37.4
unitig_747.g21718 Utricularia gibba HOM05D005865 ORTHO05D006867 3.4e-14 82.4 142 36.6
Lsat_1_v5_gn_2_5921 Lactuca sativa HOM05D005865 ORTHO05D006867 5.9e-14 81.6 162 37.7
CsaV3_4G037060 Cucumis sativus L. HOM05D005865 ORTHO05D006867 1.3e-13 80.5 113 43.4
Sed0014892 Sechium edule HOM05D005865 ORTHO05D006867 1.3e-13 80.5 112 42.0
EL10Ac1g02030 Beta vulgaris HOM05D005865 ORTHO05D006867 1.7e-13 80.1 139 35.3
MELO3C017004.2 Cucumis melo HOM05D005865 ORTHO05D006867 1.7e-13 80.1 113 43.4
CDE02G0067 Ceratophyllum demersum HOM05D005865 ORTHO05D006867 2.2e-13 79.7 140 33.6
Aqoxy6G01868 Aquilegia oxysepala HOM05D005865 ORTHO05D006867 2.9e-13 79.3 128 40.6
RcHm_v2.0_Chr6g0303901 Rosa chinensis HOM05D005865 ORTHO05D006867 5.0e-13 78.6 141 34.8
Rhsim11G0079600 Rhododendron simsii HOM05D005865 ORTHO05D006867 6.5e-13 78.2 67 52.2
CANSAT56G1424 Cannabis sativa HOM05D005865 ORTHO05D006867 8.5e-13 77.8 139 34.5
Manes.18G007801 Manihot esculenta HOM05D005865 ORTHO05D006867 1.1e-12 77.4 122 36.9
arahy.Tifrunner.gnm1.ann1.88Q24L Arachis hypogaea HOM05D005865 ORTHO05D006867 1.4e-12 77.0 122 37.7
arahy.Tifrunner.gnm1.ann1.YCE7MW Arachis hypogaea HOM05D005865 ORTHO05D006867 3.2e-12 75.9 147 34.0
HanXRQChr14g0428991 Helianthus annuus HOM05D005865 ORTHO05D006867 3.2e-12 75.9 155 30.3
Lalb_Chr03g0033591 Lupinus albus HOM05D005865 ORTHO05D006867 5.5e-12 75.1 114 34.2
ClCG05G015260 Citrullus lanatus HOM05D005865 ORTHO05D006867 1.6e-11 73.6 148 35.1
Rhsim09G0051200 Rhododendron simsii HOM05D005337 ORTHO05D006567 1.0e-10 70.9 67 47.8
SalBow6G0433 Salvia bowleyana HOM05D005865 ORTHO05D006867 1.8e-10 70.1 152 34.2
ATR0665G248 Amborella trichopoda HOM05D005865 ORTHO05D006867 5.2e-10 68.6 128 36.7
Duzib093G0711 Durio zibethinus HOM05D005865 ORTHO05D006867 8.8e-10 67.8 160 32.5
Lj5g0011422 Lotus japonicus HOM05D005865 ORTHO05D006867 1.1e-09 67.4 121 35.5
VMungo0647G1107 Vigna mungo HOM05D005865 ORTHO05D006867 2.6e-09 66.2 134 33.6
FAN20G0402 Fragaria x ananassa HOM05D005865 ORTHO05D006867 3.3e-09 65.9 140 33.6
Glyma.14G222900 Glycine max HOM05D005865 ORTHO05D006867 4.4e-09 65.5 122 32.0
Os04g0561700 Oryza sativa ssp. japonica HOM05D005865 ORTHO05D006867 7.4e-09 64.7 141 30.5
ECA238G0937 Erigeron canadensis HOM05D005865 ORTHO05D006867 1.3e-08 63.9 153 32.0
Psat0s4771g0080 Pisum sativum HOM05D005865 ORTHO05D006867 1.7e-08 63.5 121 38.0
CAN.G311.92 Capsicum annuum HOM05D005865 ORTHO05D006867 2.2e-08 63.2 64 43.8
HPP92_014547 Vanilla planifolia HOM05D005865 ORTHO05D006867 6.3e-08 61.6 131 35.1
Phvul.001G001600 Phaseolus vulgaris HOM05D005865 ORTHO05D006867 1.8e-07 60.1 122 34.4
Medtr1g026400 Medicago truncatula HOM05D005865 ORTHO05D006867 3.1e-07 59.3 122 35.2
Hma1.2p1_1100F.1_g257120 Hydrangea macrophylla HOM05D005865 ORTHO05D006867 7.0e-07 58.2 119 38.7
Zm00001eb074060 Zea mays HOM05D005865 ORTHO05D006867 1.2e-06 57.4 141 30.5


User provided reference genes

Program Settings