Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB03g12136 Brassica carinata HOM05D004931 ORTHO05D006579 1.6e-174 615.9 306 100.0
BcaC01g00008 Brassica carinata HOM05D004931 ORTHO05D006579 2.0e-159 565.8 305 93.1
BolC3t19725H Brassica oleracea HOM05D004931 ORTHO05D006579 7.7e-156 553.9 299 92.6
Sp1g24310 Schrenkiella parvula HOM05D004931 ORTHO05D006579 5.5e-154 547.7 311 91.3
Thhalv10008031m.g Eutrema salsugineum HOM05D004931 ORTHO05D006579 2.3e-152 542.3 313 90.1
C03p74760 Brassica napus HOM05D004931 ORTHO05D006579 3.9e-152 541.6 325 85.2
CARHR027590 Cardamine hirsuta HOM05D004931 ORTHO05D006579 9.7e-151 537.0 312 88.8
A08p25870 Brassica napus HOM05D004931 ORTHO05D006579 2.8e-150 535.4 323 83.6
AT1G28120 Arabidopsis thaliana HOM05D004931 ORTHO05D006579 6.3e-150 534.3 309 88.3
Carub.0001s2655 Capsella rubella HOM05D004931 ORTHO05D006579 7.0e-149 530.8 309 89.3
AL1G41640 Arabidopsis lyrata HOM05D004931 ORTHO05D006579 2.0e-148 529.3 312 88.5
BraA08t34541Z Brassica rapa HOM05D004931 ORTHO05D006579 4.0e-144 515.0 323 81.4
THA.LOC104814207 Tarenaya hassleriana HOM05D004931 ORTHO05D006579 5.5e-138 494.6 296 83.8
Aa31sc45G20 Aethionema arabicum HOM05D004931 ORTHO05D006579 1.2e-135 486.9 302 82.5
BcaB03g13953 Brassica carinata HOM05D004931 ORTHO05D006579 4.4e-135 485.0 311 83.3
BolC7t42231H Brassica oleracea HOM05D004931 ORTHO05D006579 1.1e-122 443.7 306 77.1
C07p17280 Brassica napus HOM05D004931 ORTHO05D006579 1.4e-120 436.8 306 76.5
Prupe.1G215300 Prunus persica HOM05D004931 ORTHO05D006579 3.4e-119 432.2 303 72.3
BcaC06g35334 Brassica carinata HOM05D004931 ORTHO05D006579 4.4e-119 431.8 306 75.8
MD00G1177400 Malus domestica HOM05D004931 ORTHO05D006579 1.7e-118 429.9 267 77.9
Cpa.g.sc38.82 Carica papaya HOM05D004931 ORTHO05D006579 3.7e-118 428.7 303 72.3
Gohir.D02G175400 Gossypium hirsutum HOM05D004931 ORTHO05D006579 4.9e-118 428.3 304 71.1
COL.COLO4_21767 Corchorus olitorius HOM05D004931 ORTHO05D006579 2.4e-117 426.0 305 71.1
Gohir.A03G152300 Gossypium hirsutum HOM05D004931 ORTHO05D006579 2.4e-117 426.0 304 70.7
Thecc.02G192700 Theobroma cacao HOM05D004931 ORTHO05D006579 2.4e-117 426.0 304 70.7
CiPaw.05G101400 Carya illinoinensis HOM05D004931 ORTHO05D006579 3.2e-117 425.6 311 71.7
Gorai.005G197000 Gossypium raimondii HOM05D004931 ORTHO05D006579 4.1e-117 425.2 304 70.7
FvH4_4g22670 Fragaria vesca HOM05D004931 ORTHO05D006579 7.0e-117 424.5 315 70.8
Actinidia34703 Actinidia chinensis HOM05D004931 ORTHO05D006579 2.0e-116 422.9 307 69.7
MELO3C017814.2 Cucumis melo HOM05D004931 ORTHO05D006579 2.0e-116 422.9 303 71.3
Dinv06619 Davidia involucrata HOM05D004931 ORTHO05D006579 2.0e-116 422.9 305 70.5
Atru.chr12.1413 Acer truncatum HOM05D004931 ORTHO05D006579 2.7e-116 422.5 303 70.3
Potri.003G162600 Populus trichocarpa HOM05D004931 ORTHO05D006579 7.8e-116 421.0 298 71.1
MD13G1130400 Malus domestica HOM05D004931 ORTHO05D006579 1.0e-115 420.6 274 75.2
CsaV3_4G002250 Cucumis sativus L. HOM05D004931 ORTHO05D006579 1.3e-115 420.2 303 71.0
Ca_00224_v3 Cicer arietinum L. HOM05D004931 ORTHO05D006579 6.6e-115 417.9 287 72.1
Potri.001G067400 Populus trichocarpa HOM05D004931 ORTHO05D006579 1.1e-114 417.2 286 73.8
Manes.08G101500 Manihot esculenta HOM05D004931 ORTHO05D006579 1.5e-114 416.8 302 68.2
Duzib248G0794 Durio zibethinus HOM05D004931 ORTHO05D006579 3.3e-114 415.6 268 75.0
CSS0024647 Camellia sinensis var. sinensis HOM05D004931 ORTHO05D006579 4.3e-114 415.2 311 69.1
ECA238G3692 Erigeron canadensis HOM05D004931 ORTHO05D006579 5.6e-114 414.8 267 75.7
Medtr2g011420 Medicago truncatula HOM05D004931 ORTHO05D006579 1.2e-113 413.7 300 70.7
Haze_12500 Corylus avellana HOM05D004931 ORTHO05D006579 1.6e-113 413.3 304 70.1
CANSAT01G2308 Cannabis sativa HOM05D004931 ORTHO05D006579 3.6e-113 412.1 303 69.3
AUR62005713 Chenopodium quinoa HOM05D004931 ORTHO05D006579 4.7e-113 411.8 265 74.3
PSO017G2176 Papaver somniferum HOM05D004931 ORTHO05D006579 4.7e-113 411.8 268 75.4
VMungo0540G0694 Vigna mungo HOM05D004931 ORTHO05D006579 8.0e-113 411.0 305 69.8
AUR62028841 Chenopodium quinoa HOM05D004931 ORTHO05D006579 1.8e-112 409.8 265 74.7
Lsat_1_v5_gn_2_17061 Lactuca sativa HOM05D004931 ORTHO05D006579 1.8e-112 409.8 315 66.0
Aqoxy5G03136 Aquilegia oxysepala HOM05D004931 ORTHO05D006579 2.3e-112 409.5 301 68.1
Ciclev10005352m.g Citrus clementina HOM05D004931 ORTHO05D006579 2.3e-112 409.5 267 74.9
Nn3g16276 Nelumbo nucifera HOM05D004931 ORTHO05D006579 2.3e-112 409.5 305 68.9
Psat1g210240 Pisum sativum HOM05D004931 ORTHO05D006579 2.3e-112 409.5 264 75.0
Sed0000722 Sechium edule HOM05D004931 ORTHO05D006579 2.3e-112 409.5 260 76.5
TAR622G0753 Trochodendron aralioides HOM05D004931 ORTHO05D006579 2.3e-112 409.5 303 67.0
TPR.G19613 Trifolium pratense HOM05D004931 ORTHO05D006579 4.0e-112 408.7 263 75.7
Cfa009447 Carpinus fangiana HOM05D004931 ORTHO05D006579 5.2e-112 408.3 303 68.6
PSO478G0594 Papaver somniferum HOM05D004931 ORTHO05D006579 5.2e-112 408.3 265 75.8
PGR102G0149 Punica granatum HOM05D004931 ORTHO05D006579 5.2e-112 408.3 305 68.2
Lj6g0004184 Lotus japonicus HOM05D004931 ORTHO05D006579 1.2e-111 407.1 301 68.4
Glyma.15G065800 Glycine max HOM05D004931 ORTHO05D006579 1.5e-111 406.8 267 75.3
HanXRQChr17g0559151 Helianthus annuus HOM05D004931 ORTHO05D006579 2.0e-111 406.4 314 67.2
RcHm_v2.0_Chr4g0428911 Rosa chinensis HOM05D004931 ORTHO05D006579 4.4e-111 405.2 270 74.8
Lj6A838G27 Lonicera japonica HOM05D004931 ORTHO05D006579 1.3e-110 403.7 252 79.4
TWI36G0173 Tripterygium wilfordii HOM05D004931 ORTHO05D006579 1.3e-110 403.7 273 73.6
Glyma.13G248100 Glycine max HOM05D004931 ORTHO05D006579 1.7e-110 403.3 267 74.2
TAR374G0634 Trochodendron aralioides HOM05D004931 ORTHO05D006579 3.7e-110 402.1 304 65.8
Manes.09G188000 Manihot esculenta HOM05D004931 ORTHO05D006579 6.4e-110 401.4 303 67.0
Phvul.006G193900 Phaseolus vulgaris HOM05D004931 ORTHO05D006579 8.3e-110 401.0 308 66.6
vmacro10419 Vaccinium macrocarpon HOM05D004931 ORTHO05D006579 1.1e-109 400.6 322 64.6
Migut.K01057 Erythranthe guttata HOM05D004931 ORTHO05D006579 1.4e-109 400.2 270 71.5
QL03p049374 Quercus lobata HOM05D004931 ORTHO05D006579 2.4e-109 399.4 326 64.1
Cc11_g15020 Coffea canephora HOM05D004931 ORTHO05D006579 7.0e-109 397.9 294 67.7
MSTRG.455 Avicennia marina HOM05D004931 ORTHO05D006579 2.1e-108 396.4 303 64.7
EL10Ac6g13609 Beta vulgaris HOM05D004931 ORTHO05D006579 2.1e-108 396.4 258 74.0
arahy.Tifrunner.gnm1.ann1.BF7HNV Arachis hypogaea HOM05D004931 ORTHO05D006579 4.6e-108 395.2 302 65.2
arahy.Tifrunner.gnm1.ann1.Q671IP Arachis hypogaea HOM05D004931 ORTHO05D006579 4.6e-108 395.2 302 65.2
SGA_v2.0_scaffold81G25976 Striga asiatica HOM05D004931 ORTHO05D006579 6.0e-108 394.8 309 64.7
SGA_v2.0_scaffold80G25951 Striga asiatica HOM05D004931 ORTHO05D006579 1.7e-107 393.3 309 63.8
Solyc04g045480.3 Solanum lycopersicum HOM05D004931 ORTHO05D006579 1.5e-106 390.2 268 70.9
Os08g0537800 Oryza sativa ssp. japonica HOM05D004931 ORTHO05D006579 7.3e-106 387.9 268 68.7
ClCG07G011910 Citrullus lanatus HOM05D004931 ORTHO05D006579 1.2e-105 387.1 308 66.9
FAN17G1056 Fragaria x ananassa HOM05D004931 ORTHO05D006579 2.1e-105 386.3 284 70.4
Rhsim09G0128100 Rhododendron simsii HOM05D004931 ORTHO05D006579 2.8e-105 386.0 358 58.9
Sopen04g017340 Solanum pennellii HOM05D004931 ORTHO05D006579 6.2e-105 384.8 268 69.8
CDE05G1203 Ceratophyllum demersum HOM05D004931 ORTHO05D006579 4.0e-104 382.1 269 68.8
CDE05G3195 Ceratophyllum demersum HOM05D004931 ORTHO05D006579 4.0e-104 382.1 264 70.1
SalBow2G3164 Salvia bowleyana HOM05D004931 ORTHO05D006579 8.9e-104 380.9 320 62.5
HPP92_011736 Vanilla planifolia HOM05D004931 ORTHO05D006579 1.2e-103 380.6 277 66.1
unitig_8.g2895 Utricularia gibba HOM05D004931 ORTHO05D006579 1.3e-102 377.1 301 62.8
GSVIVG01001087001 Vitis vinifera HOM05D004931 ORTHO05D006579 1.3e-102 377.1 269 69.9
Sc14g0009240 Simmondsia chinensis HOM05D004931 ORTHO05D006579 1.7e-102 376.7 264 68.2
Ah.02g131420 Amaranthus hybridus HOM05D004931 ORTHO05D006579 9.2e-101 370.9 305 63.3
FAN07G1868 Fragaria x ananassa HOM05D004931 ORTHO05D006579 6.0e-100 368.2 296 66.9
SEGI_13679 Sequoiadendron giganteum HOM05D004931 ORTHO05D006579 1.8e-96 356.7 262 66.8
Nitab4.5_0007183g0010 Nicotiana tabacum HOM05D004931 ORTHO05D006579 2.4e-96 356.3 310 61.0
HPP92_011677 Vanilla planifolia HOM05D004931 ORTHO05D006579 5.2e-96 355.1 277 62.5
DCAR_024966 Daucus carota HOM05D004931 ORTHO05D006579 8.9e-96 354.4 306 61.1
Hund26708 Selenicereus undatus HOM05D004931 ORTHO05D006579 1.9e-93 346.7 257 66.5
ATR0582G144 Amborella trichopoda HOM05D004931 ORTHO05D006579 4.6e-92 342.0 287 59.6
FAN12G1488 Fragaria x ananassa HOM05D004931 ORTHO05D006579 1.7e-91 340.1 284 64.8
CAN.G465.9 Capsicum annuum HOM05D004931 ORTHO05D006579 1.1e-90 337.4 264 64.4
Mapoly0005s0248 Marchantia polymorpha HOM05D004931 ORTHO05D006579 1.1e-90 337.4 261 62.8
Zm00001eb175560 Zea mays HOM05D004931 ORTHO05D006579 1.9e-90 336.7 274 62.0
AagrBONN_evm.TU.Sc2ySwM_368.2426 Anthoceros agrestis HOM05D004931 ORTHO05D006579 5.6e-90 335.1 245 65.7
Sabra01G0046800 Salix brachista HOM05D004931 ORTHO05D006579 1.1e-88 330.9 249 69.5
Peaxi162Scf00128g01757 Petunia axillaris HOM05D004931 ORTHO05D006579 2.4e-88 329.7 249 65.9
MBI07_g35974_MAGBIO Magnolia biondii HOM05D004931 ORTHO05D006579 2.6e-87 326.2 267 62.5
SMO358G0085 Selaginella moellendorffii HOM05D004931 ORTHO05D006579 8.4e-86 321.2 245 62.4
Pp3c5_2520 Physcomitrium patens HOM05D004931 ORTHO05D006579 2.7e-84 316.2 254 62.2
Nitab4.5_0001408g0040 Nicotiana tabacum HOM05D004931 ORTHO05D006579 4.6e-84 315.5 265 61.5
AagrBONN_evm.TU.Sc2ySwM_26.3 Anthoceros agrestis HOM05D004931 ORTHO05D006579 1.1e-82 310.8 218 67.9
A07p11470 Brassica napus HOM05D004931 ORTHO05D006579 8.1e-81 304.7 295 59.7
Pp3c6_24540 Physcomitrium patens HOM05D004931 ORTHO05D006579 5.3e-80 302.0 259 59.1
Lalb_Chr15g0090151 Lupinus albus HOM05D004931 ORTHO05D006579 9.0e-80 301.2 205 73.7
MBI10_g42797_MAGBIO Magnolia biondii HOM05D004931 ORTHO05D006579 4.5e-79 298.9 262 58.4
Dinv02758 Davidia involucrata HOM05D004931 ORTHO05D006579 2.3e-75 286.6 216 65.7
Sed0016914 Sechium edule HOM05D004931 ORTHO05D006579 7.4e-74 281.6 215 68.4
BraA07t28936Z Brassica rapa HOM05D004931 ORTHO05D006579 9.6e-74 281.2 257 62.3
Duzib132G0410 Durio zibethinus HOM05D004931 ORTHO05D006579 1.2e-71 274.2 254 57.5
Actinidia31350 Actinidia chinensis HOM05D004931 ORTHO05D006579 4.9e-70 268.9 307 50.8
PSO832G0491 Papaver somniferum HOM05D004931 ORTHO05D006579 3.9e-67 259.2 220 62.7
Cre10.g441500 Chlamydomonas reinhardtii HOM05D004931 ORTHO05D006579 1.9e-53 213.8 266 44.0
Haze_27431 Corylus avellana HOM05D004931 ORTHO05D006579 1.5e-47 194.1 299 40.8
Eucgr.B03557 Eucalyptus grandis HOM05D004931 ORTHO05D006579 1.4e-45 187.6 120 73.3
Lalb_Chr18g0060061 Lupinus albus HOM05D004931 ORTHO05D006579 2.1e-44 183.7 122 75.4
PRCOL_00001027 Prasinoderma coloniale HOM05D004931 ORTHO05D006579 1.8e-43 180.6 275 39.6
PGSC0003DMG402006689 Solanum tuberosum HOM05D004931 ORTHO05D006579 1.4e-40 171.0 122 69.7
PGSC0003DMG401006689 Solanum tuberosum HOM05D004931 ORTHO05D006579 1.1e-37 161.4 117 65.8
CBR_g45420 Chara braunii HOM05D000019 ORTHO05D000048 9.4e-37 158.3 141 59.6
RcHm_v2.0_Chr7g0205601 Rosa chinensis HOM05D004931 ORTHO05D006579 6.1e-36 155.6 88 83.0
PSO170G5257 Papaver somniferum HOM05D004650 ORTHO05D005715 8.2e-33 145.2 119 65.5
BcaB03g12135 Brassica carinata HOM05D004931 ORTHO05D006579 2.1e-28 130.6 74 87.8
TPR.G382 Trifolium pratense HOM05D004931 ORTHO05D006579 4.4e-26 122.9 69 81.2
Sc17g0004710 Simmondsia chinensis HOM05D004931 ORTHO05D006579 1.7e-25 120.9 85 68.2
TPR.G19900 Trifolium pratense HOM05D004931 ORTHO05D006579 1.7e-22 110.9 69 76.8
Zm00001eb406040 Zea mays HOM05D004931 ORTHO05D006579 2.5e-21 107.1 286 28.3
ECA238G1930 Erigeron canadensis HOM05D000406 ORTHO05D006918 2.7e-20 103.6 56 83.9
Zm00001eb242070 Zea mays HOM05D004931 ORTHO05D037234 8.0e-20 102.1 283 29.3
BolC2t10441H Brassica oleracea HOM05D004931 ORTHO05D027277 1.8e-19 100.9 56 87.5
Os02g0521600 Oryza sativa ssp. japonica HOM05D004931 ORTHO05D037234 5.2e-19 99.4 258 30.6
Zm00001eb037020 Zea mays HOM05D004931 ORTHO05D006579 2.2e-17 94.0 73 61.6
C01p27720 Brassica napus HOM05D004931 ORTHO05D027277 6.3e-17 92.4 50 86.0
Os04g0652600 Oryza sativa ssp. japonica HOM05D004931 ORTHO05D299584 4.1e-16 89.7 217 27.6
Zm00001eb406050 Zea mays HOM05D004931 ORTHO05D444756 9.1e-16 88.6 208 29.3
Cre06.g253755 Chlamydomonas reinhardtii HOM05D018811 ORTHO05D145199 3.8e-14 83.2 353 24.6
TPR.G399 Trifolium pratense HOM05D004931 ORTHO05D006579 1.1e-13 81.6 69 59.4
Cre06.g253459 Chlamydomonas reinhardtii HOM05D018811 ORTHO05D146359 1.5e-13 81.3 353 24.4
Lalb_Chr18g0060051 Lupinus albus HOM05D004931 ORTHO05D006579 5.5e-13 79.3 47 76.6
BcaC03g16580 Brassica carinata HOM05D004931 ORTHO05D027277 9.5e-13 78.6 41 90.2
Solyc03g059395.1 Solanum lycopersicum HOM05D004931 ORTHO05D006579 1.2e-12 78.2 51 66.7
TPR.G27432 Trifolium pratense HOM05D004931 ORTHO05D006579 4.7e-12 76.3 66 57.6
Os02g0513800 Oryza sativa ssp. japonica HOM05D023198 ORTHO05D294263 5.7e-10 69.3 231 26.8
FAN01G2784 Fragaria x ananassa HOM05D005362 ORTHO05D006895 1.4e-08 64.7 152 32.2
Sopen03g014100 Solanum pennellii HOM05D004931 ORTHO05D006579 1.8e-08 64.3 41 70.7


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