Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB03g11924 Brassica carinata HOM05D001239 ORTHO05D011709 1.4e-91 339.7 189 100.0
BcaB07g30912 Brassica carinata HOM05D000496 ORTHO05D000411 1.3e-17 94.0 89 56.2
BcaC02g09195 Brassica carinata HOM05D001239 ORTHO05D031919 1.6e-15 87.0 85 56.5
C04p30980 Brassica napus HOM05D001035 ORTHO05D021752 1.1e-14 84.3 91 50.5
BcaB01g01785 Brassica carinata HOM05D000496 ORTHO05D000925 1.8e-14 83.6 86 53.5
BraA04t17766Z Brassica rapa HOM05D001239 ORTHO05D024427 1.8e-14 83.6 90 50.0
BcaB07g33550 Brassica carinata HOM05D001239 ORTHO05D011709 4.0e-14 82.4 82 54.9
BcaC05g25304 Brassica carinata HOM05D000508 ORTHO05D000371 4.0e-14 82.4 83 54.2
C05p11830 Brassica napus HOM05D001239 ORTHO05D033080 4.0e-14 82.4 83 54.2
C09p49690 Brassica napus HOM05D001239 ORTHO05D011709 4.0e-14 82.4 82 54.9
BcaC01g03871 Brassica carinata HOM05D001239 ORTHO05D011709 5.3e-14 82.0 80 55.0
BcaC04g19167 Brassica carinata HOM05D000496 ORTHO05D000411 2.0e-13 80.1 90 48.9
C01p30110 Brassica napus HOM05D001239 ORTHO05D023908 2.0e-13 80.1 68 61.8
BolC2t08478H Brassica oleracea HOM05D001239 ORTHO05D024427 2.0e-13 80.1 90 50.0
C03p49130 Brassica napus HOM05D014076 ORTHO05D024532 3.4e-13 79.3 84 48.8
C09p42620 Brassica napus HOM05D001239 ORTHO05D011709 4.5e-13 79.0 81 55.6
A01p18960 Brassica napus HOM05D014076 ORTHO05D021903 5.8e-13 78.6 94 52.1
BolC2t10713H Brassica oleracea HOM05D001239 ORTHO05D011709 5.8e-13 78.6 85 51.8
BcaC09g49677 Brassica carinata HOM05D000496 ORTHO05D011709 7.6e-13 78.2 70 60.0
BolC4t26715H Brassica oleracea HOM05D001239 ORTHO05D011709 1.0e-12 77.8 87 51.7
C01p34040 Brassica napus HOM05D001239 ORTHO05D011709 1.3e-12 77.4 70 60.0
BraA01t01837Z Brassica rapa HOM05D014076 ORTHO05D021903 2.2e-12 76.6 94 51.1
C03p49160 Brassica napus HOM05D014076 ORTHO05D024532 2.9e-12 76.3 84 46.4
BolC3t17197H Brassica oleracea HOM05D014076 ORTHO05D024532 2.9e-12 76.3 84 46.4
BcaC01g02173 Brassica carinata HOM05D001239 ORTHO05D017499 3.8e-12 75.9 93 46.2
C03p67910 Brassica napus HOM05D001239 ORTHO05D017499 3.8e-12 75.9 93 46.2
A05p24750 Brassica napus HOM05D002138 ORTHO05D002106 4.9e-12 75.5 101 44.6
BcaC06g36045 Brassica carinata HOM05D000496 ORTHO05D000411 6.5e-12 75.1 74 51.4
A06p35270 Brassica napus HOM05D000591 ORTHO05D000579 6.5e-12 75.1 93 49.5
BraA09t38239Z Brassica rapa HOM05D014076 ORTHO05D021903 1.9e-11 73.6 78 51.3
BolC5t30244H Brassica oleracea HOM05D001239 ORTHO05D011709 3.2e-11 72.8 143 36.4
BolC8t49935H Brassica oleracea HOM05D001239 ORTHO05D011709 4.2e-11 72.4 115 39.1
BcaC04g22862 Brassica carinata HOM05D000496 ORTHO05D000411 7.1e-11 71.6 74 52.7
BcaC09g49165 Brassica carinata HOM05D000032 ORTHO05D000925 7.1e-11 71.6 64 56.2
BcaC05g27311 Brassica carinata HOM05D001239 ORTHO05D011709 9.3e-11 71.2 60 58.3
C08p07070 Brassica napus HOM05D001239 ORTHO05D024427 9.3e-11 71.2 91 48.4
BcaB04g18066 Brassica carinata HOM05D001239 ORTHO05D023908 1.6e-10 70.5 178 34.8
BcaB01g02634 Brassica carinata HOM05D000496 ORTHO05D000411 2.1e-10 70.1 70 51.4
C04p33720 Brassica napus HOM05D031458 ORTHO05D027524 2.7e-10 69.7 65 55.4
BolC1t02956H Brassica oleracea HOM05D001239 ORTHO05D023908 2.7e-10 69.7 50 68.0
BolC4t24940H Brassica oleracea HOM05D031458 ORTHO05D027524 2.7e-10 69.7 65 55.4
BcaB06g26119 Brassica carinata HOM05D001239 ORTHO05D011709 3.5e-10 69.3 120 40.8
BolC8t47551H Brassica oleracea HOM05D001239 ORTHO05D024427 3.5e-10 69.3 91 47.3
C07p03520 Brassica napus HOM05D001239 ORTHO05D027739 7.9e-10 68.2 57 61.4
C04p52150 Brassica napus HOM05D027742 ORTHO05D027054 1.0e-09 67.8 90 47.8
BcaC04g22514 Brassica carinata HOM05D001239 ORTHO05D027739 1.3e-09 67.4 57 61.4
BcaB05g23185 Brassica carinata HOM05D001239 ORTHO05D023908 1.8e-09 67.0 89 40.4
C02p57570 Brassica napus HOM05D001239 ORTHO05D011709 3.9e-09 65.9 63 57.1
C07p05770 Brassica napus HOM05D001239 ORTHO05D011709 3.9e-09 65.9 49 63.3
BolC7t40747H Brassica oleracea HOM05D001239 ORTHO05D027739 3.9e-09 65.9 97 42.3
BraA03t13842Z Brassica rapa HOM05D009238 ORTHO05D020093 3.9e-09 65.9 55 58.2
BcaC02g11658 Brassica carinata HOM05D014076 ORTHO05D021903 5.1e-09 65.5 165 32.1
BcaC07g40131 Brassica carinata HOM05D014076 ORTHO05D000006 8.7e-09 64.7 86 46.5
BcaC01g01482 Brassica carinata HOM05D009238 ORTHO05D021611 1.5e-08 63.9 68 48.5
BraA03t12194Z Brassica rapa HOM05D009238 ORTHO05D012489 1.5e-08 63.9 74 47.3
BraA09t38523Z Brassica rapa HOM05D027742 ORTHO05D027054 1.5e-08 63.9 55 61.8
BcaB03g15929 Brassica carinata HOM05D000496 ORTHO05D000411 1.9e-08 63.5 58 55.2
A10p16820 Brassica napus HOM05D016815 ORTHO05D012489 1.9e-08 63.5 51 58.8
BolC2t08494H Brassica oleracea HOM05D009238 ORTHO05D012489 2.5e-08 63.2 63 52.4
CARHR154060 Cardamine hirsuta HOM05D001239 ORTHO05D011709 2.5e-08 63.2 68 52.9
BcaC06g33595 Brassica carinata HOM05D000003 ORTHO05D000006 4.3e-08 62.4 96 41.7
BraA06t25448Z Brassica rapa HOM05D001239 ORTHO05D017499 4.3e-08 62.4 82 42.7
BolC1t05632H Brassica oleracea HOM05D014076 ORTHO05D021903 7.4e-08 61.6 86 46.5
BcaC03g17089 Brassica carinata HOM05D025306 ORTHO05D011709 9.7e-08 61.2 68 50.0
BcaC03g18002 Brassica carinata HOM05D016815 ORTHO05D020093 9.7e-08 61.2 54 55.6
C02p60610 Brassica napus HOM05D016815 ORTHO05D020093 9.7e-08 61.2 54 55.6
BraA10t43824Z Brassica rapa HOM05D001239 ORTHO05D000925 9.7e-08 61.2 47 61.7
BcaB01g02065 Brassica carinata HOM05D031458 ORTHO05D027524 1.6e-07 60.5 50 64.0
C08p14340 Brassica napus HOM05D001239 ORTHO05D024532 1.6e-07 60.5 45 66.7
BcaB04g17452 Brassica carinata HOM05D009238 ORTHO05D019868 4.8e-07 58.9 60 51.7
A03p63670 Brassica napus HOM05D001239 ORTHO05D011709 4.8e-07 58.9 60 48.3
C06p15150 Brassica napus HOM05D016815 ORTHO05D020093 4.8e-07 58.9 49 57.1
BolC6t36689H Brassica oleracea HOM05D016815 ORTHO05D020093 4.8e-07 58.9 49 57.1
BraA03t15438Z Brassica rapa HOM05D001239 ORTHO05D011709 4.8e-07 58.9 60 48.3
BcaC02g09623 Brassica carinata HOM05D002743 ORTHO05D002895 8.2e-07 58.2 60 51.7
BcaC06g33741 Brassica carinata HOM05D000496 ORTHO05D000411 8.2e-07 58.2 53 60.4
BolC1t03373H Brassica oleracea HOM05D001239 ORTHO05D011709 8.2e-07 58.2 50 62.0
BolC4t26060H Brassica oleracea HOM05D009238 ORTHO05D012489 8.2e-07 58.2 60 51.7
BcaC01g06924 Brassica carinata HOM05D000496 ORTHO05D000411 1.1e-06 57.8 50 54.0
A10p08920 Brassica napus HOM05D001239 ORTHO05D011709 1.1e-06 57.8 59 52.5
C09p64410 Brassica napus HOM05D007244 ORTHO05D000411 1.1e-06 57.8 105 34.3
BolC5t29932H Brassica oleracea HOM05D001239 ORTHO05D033080 1.1e-06 57.8 60 51.7
BolC9t57963H Brassica oleracea HOM05D011670 ORTHO05D020093 1.1e-06 57.8 51 56.9
BcaC01g05559 Brassica carinata HOM05D001239 ORTHO05D011709 1.4e-06 57.4 76 47.4
C05p15940 Brassica napus HOM05D009238 ORTHO05D021611 1.4e-06 57.4 47 61.7
BcaB07g32141 Brassica carinata HOM05D000496 ORTHO05D000411 1.8e-06 57.0 63 50.8
C03p47070 Brassica napus HOM05D016815 ORTHO05D020093 1.8e-06 57.0 60 43.3
BolC2t07633H Brassica oleracea HOM05D009238 ORTHO05D019868 1.8e-06 57.0 59 52.5
BcaC07g39368 Brassica carinata HOM05D009238 ORTHO05D012489 2.4e-06 56.6 62 45.2
BolC8t48999H Brassica oleracea HOM05D007244 ORTHO05D011635 2.4e-06 56.6 91 37.4
C08p13580 Brassica napus HOM05D000904 ORTHO05D006931 3.1e-06 56.2 92 37.0
BraA06t26451Z Brassica rapa HOM05D001307 ORTHO05D001158 3.1e-06 56.2 65 52.3
BcaC02g12033 Brassica carinata HOM05D001239 ORTHO05D011709 4.1e-06 55.8 78 41.0
A10p14470 Brassica napus HOM05D011670 ORTHO05D027274 4.1e-06 55.8 57 49.1
C04p63540 Brassica napus HOM05D007244 ORTHO05D040510 4.1e-06 55.8 60 46.7
C05p23240 Brassica napus HOM05D009238 ORTHO05D021611 4.1e-06 55.8 47 59.6
BraA10t43537Z Brassica rapa HOM05D011670 ORTHO05D027274 4.1e-06 55.8 57 49.1
BcaC04g21866 Brassica carinata HOM05D011670 ORTHO05D012489 6.9e-06 55.1 71 38.0
BraA08t34457Z Brassica rapa HOM05D007244 ORTHO05D040510 6.9e-06 55.1 73 43.8
BcaC02g08196 Brassica carinata HOM05D009238 ORTHO05D011709 9.0e-06 54.7 66 51.5
BolC6t38778H Brassica oleracea HOM05D009238 ORTHO05D012489 9.0e-06 54.7 66 43.9


User provided reference genes

Program Settings