Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g11543 Brassica carinata HOM05D001285 ORTHO05D000199 1.5e-129 466.1 224 100.0
BcaB06g26759 Brassica carinata HOM05D001285 ORTHO05D000199 4.4e-100 368.2 227 79.3
BcaB07g33410 Brassica carinata HOM05D001285 ORTHO05D000199 8.3e-99 364.0 242 74.0
BcaB07g33409 Brassica carinata HOM05D001285 ORTHO05D000199 3.1e-98 362.1 214 81.8
BcaB01g01138 Brassica carinata HOM05D001285 ORTHO05D000199 4.1e-90 335.1 190 85.3
BcaB02g11542 Brassica carinata HOM05D001285 ORTHO05D000199 1.2e-86 323.6 204 77.5
BcaB02g11091 Brassica carinata HOM05D001285 ORTHO05D000199 2.3e-85 319.3 214 76.2
BcaC02g10994 Brassica carinata HOM05D001285 ORTHO05D000199 4.4e-84 315.1 221 68.3
BraA02t07765Z Brassica rapa HOM05D001285 ORTHO05D000199 3.9e-80 302.0 201 72.1
BcaC03g16251 Brassica carinata HOM05D001285 ORTHO05D000199 1.1e-79 300.4 212 69.8
A02p27370 Brassica napus HOM05D001285 ORTHO05D000199 1.9e-79 299.7 222 67.1
BcaC09g49778 Brassica carinata HOM05D001285 ORTHO05D017506 2.1e-78 296.2 228 65.8
BolC2t10065H Brassica oleracea HOM05D001285 ORTHO05D000199 8.6e-72 274.2 225 63.6
BcaB05g23429 Brassica carinata HOM05D001285 ORTHO05D000199 5.8e-60 235.0 242 51.2
BraA05t21191Z Brassica rapa HOM05D001285 ORTHO05D000199 5.8e-60 235.0 214 56.1
BcaC02g10995 Brassica carinata HOM05D001285 ORTHO05D000199 1.6e-57 226.9 214 55.6
C01p33040 Brassica napus HOM05D001285 ORTHO05D000199 1.0e-48 197.6 126 73.0
BcaB04g17409 Brassica carinata HOM05D001285 ORTHO05D000199 2.0e-28 130.2 72 83.3
BcaB06g26823 Brassica carinata HOM05D001285 ORTHO05D000199 7.6e-28 128.3 72 80.6
C02p42390 Brassica napus HOM05D001285 ORTHO05D039223 1.5e-23 114.0 98 56.1
C04p22370 Brassica napus HOM05D001379 ORTHO05D000199 7.4e-23 111.7 80 65.0
Aa31csc1523G10 Aethionema arabicum HOM05D001285 ORTHO05D000199 1.1e-21 107.8 230 31.3
BcaB08g35296 Brassica carinata HOM05D001285 ORTHO05D000199 4.5e-20 102.4 69 69.6
C01p33030 Brassica napus HOM05D001285 ORTHO05D000199 2.2e-19 100.1 53 83.0
BcaC03g16409 Brassica carinata HOM05D001285 ORTHO05D039223 8.5e-19 98.2 66 68.2
A05p23270 Brassica napus HOM05D001285 ORTHO05D000199 1.4e-18 97.4 58 72.4
BcaB05g23483 Brassica carinata HOM05D001285 ORTHO05D017506 4.2e-18 95.9 81 53.1
BcaB05g23430 Brassica carinata HOM05D001285 ORTHO05D000199 1.2e-17 94.4 61 70.5
BcaB07g32962 Brassica carinata HOM05D001285 ORTHO05D000199 1.9e-15 87.0 73 52.1
Aa31LG6G7610 Aethionema arabicum HOM05D001285 ORTHO05D000199 4.3e-15 85.9 239 25.9
BcaB07g32960 Brassica carinata HOM05D001285 ORTHO05D000199 1.4e-13 80.9 73 49.3
Thhalv10022509m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 1.8e-13 80.5 196 29.6
Thhalv10017847m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 3.1e-13 79.7 194 25.3
Thhalv10000549m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 5.3e-13 79.0 194 25.3
Aa31LG11G8470 Aethionema arabicum HOM05D001285 ORTHO05D000199 2.0e-12 77.0 166 29.5
Aa31LG8G11990 Aethionema arabicum HOM05D001285 ORTHO05D000199 2.0e-12 77.0 231 26.0
BolC5t32887H Brassica oleracea HOM05D000471 ORTHO05D000199 1.7e-11 73.9 186 29.6
Thhalv10002307m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 5.0e-11 72.4 185 25.4
BolC9t54977H Brassica oleracea HOM05D000471 ORTHO05D000199 6.5e-11 72.0 186 29.6
BolC9t55313H Brassica oleracea HOM05D000471 ORTHO05D000199 6.5e-11 72.0 190 26.3
Thhalv10003021m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 1.1e-10 71.2 178 25.3
BcaB01g02953 Brassica carinata HOM05D001285 ORTHO05D000199 1.4e-10 70.9 197 24.4
BolC1t01861H Brassica oleracea HOM05D000471 ORTHO05D000199 1.9e-10 70.5 179 26.8
BolC8t48809H Brassica oleracea HOM05D000471 ORTHO05D000199 1.9e-10 70.5 121 32.2
Carub.0001s3503 Capsella rubella HOM05D001285 ORTHO05D000199 3.2e-10 69.7 208 26.0
C03p66080 Brassica napus HOM05D000471 ORTHO05D000199 9.4e-10 68.2 194 26.8
BolC3t16026H Brassica oleracea HOM05D000471 ORTHO05D000199 9.4e-10 68.2 141 32.6
Aa31sc154G10 Aethionema arabicum HOM05D000471 ORTHO05D000199 2.1e-09 67.0 195 23.1
Thhalv10029334m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 2.1e-09 67.0 191 23.0
Carub.0008s2148 Capsella rubella HOM05D000471 ORTHO05D000199 4.6e-09 65.9 187 26.7
Thhalv10028199m.g Eutrema salsugineum HOM05D000471 ORTHO05D000199 4.6e-09 65.9 163 27.0
C05p35620 Brassica napus HOM05D000471 ORTHO05D000199 6.1e-09 65.5 154 31.2
BolC2t10459H Brassica oleracea HOM05D001285 ORTHO05D000199 7.9e-09 65.1 168 24.4
BraSC35t46011Z Brassica rapa HOM05D000471 ORTHO05D000199 7.9e-09 65.1 191 26.2
BcaNung05688 Brassica carinata HOM05D001285 ORTHO05D000199 1.4e-08 64.3 32 90.6
C04p30610 Brassica napus HOM05D000471 ORTHO05D000199 1.4e-08 64.3 191 27.7
BraA05t21432Z Brassica rapa HOM05D001285 ORTHO05D000199 1.4e-08 64.3 168 24.4
BcaC03g17060 Brassica carinata HOM05D001285 ORTHO05D000199 1.8e-08 63.9 166 23.5
C02p49780 Brassica napus HOM05D001285 ORTHO05D000199 1.8e-08 63.9 166 23.5
C06p35450 Brassica napus HOM05D001285 ORTHO05D000199 1.8e-08 63.9 166 22.9
Thhalv10009813m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 1.8e-08 63.9 170 24.7
A06p22000 Brassica napus HOM05D001285 ORTHO05D000199 5.1e-08 62.4 170 22.9
BolC1t04517H Brassica oleracea HOM05D000977 ORTHO05D001094 5.1e-08 62.4 93 33.3
Aa31sc112G50 Aethionema arabicum HOM05D001285 ORTHO05D000199 6.7e-08 62.0 153 30.7
CARHR254680 Cardamine hirsuta HOM05D001285 ORTHO05D013516 6.7e-08 62.0 113 33.6
Thhalv10015545m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 6.7e-08 62.0 197 23.4
C06p09110 Brassica napus HOM05D000471 ORTHO05D000199 8.8e-08 61.6 203 26.1
BolC2t09493H Brassica oleracea HOM05D000471 ORTHO05D000199 8.8e-08 61.6 144 28.5
BolC3t18881H Brassica oleracea HOM05D000471 ORTHO05D000199 8.8e-08 61.6 149 31.5
Aa31LG10G6700 Aethionema arabicum HOM05D001285 ORTHO05D000199 1.5e-07 60.8 109 33.0
Aa31LG3G1850 Aethionema arabicum HOM05D001285 ORTHO05D000199 1.5e-07 60.8 109 33.0
Aa31LG5G20540 Aethionema arabicum HOM05D001285 ORTHO05D000199 1.5e-07 60.8 109 33.0
Aa31LG6G5080 Aethionema arabicum HOM05D001285 ORTHO05D000199 1.5e-07 60.8 109 33.0
Aa31sc86G90 Aethionema arabicum HOM05D001285 ORTHO05D000199 1.5e-07 60.8 109 33.0
BcaC08g43423 Brassica carinata HOM05D001285 ORTHO05D000199 1.5e-07 60.8 170 23.5
BolC9t57745H Brassica oleracea HOM05D001285 ORTHO05D000199 1.5e-07 60.8 194 24.2
Thhalv10005571m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 1.5e-07 60.8 170 25.3
BolC8t47755H Brassica oleracea HOM05D000471 ORTHO05D000199 2.6e-07 60.1 94 39.4
Thhalv10005449m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 2.6e-07 60.1 170 27.1
C03p70020 Brassica napus HOM05D001285 ORTHO05D000199 3.3e-07 59.7 171 22.2
C05p33730 Brassica napus HOM05D000471 ORTHO05D000199 3.3e-07 59.7 161 28.0
C09p39130 Brassica napus HOM05D010384 ORTHO05D021981 3.3e-07 59.7 171 28.1
BolC9t56792H Brassica oleracea HOM05D010384 ORTHO05D021981 3.3e-07 59.7 171 28.1
BraA06t24592Z Brassica rapa HOM05D001285 ORTHO05D000199 3.3e-07 59.7 168 23.8
Thhalv10021997m.g Eutrema salsugineum HOM05D001285 ORTHO05D000199 3.3e-07 59.7 193 24.9
Sp1g30760 Schrenkiella parvula HOM05D000471 ORTHO05D000199 5.7e-07 58.9 187 26.2
BolC5t30742H Brassica oleracea HOM05D000471 ORTHO05D000199 9.7e-07 58.2 144 27.1
Aa31sc478G30 Aethionema arabicum HOM05D001285 ORTHO05D000199 1.3e-06 57.8 78 37.2
Aa31LG8G12130 Aethionema arabicum HOM05D001285 ORTHO05D000199 1.7e-06 57.4 103 33.0
C02p57920 Brassica napus HOM05D001285 ORTHO05D000199 1.7e-06 57.4 171 21.6
BolC2t11860H Brassica oleracea HOM05D001285 ORTHO05D000199 1.7e-06 57.4 171 21.6
Carub.0002s0992 Capsella rubella HOM05D010384 ORTHO05D013516 1.7e-06 57.4 106 33.0
Aa31sc119G80 Aethionema arabicum HOM05D001285 ORTHO05D000199 2.2e-06 57.0 110 30.9
C06p05070 Brassica napus HOM05D000471 ORTHO05D000199 2.2e-06 57.0 161 27.3
AL4G20190 Arabidopsis lyrata HOM05D001285 ORTHO05D000199 2.8e-06 56.6 210 23.8
C09p09790 Brassica napus HOM05D000471 ORTHO05D000199 2.8e-06 56.6 161 27.3
C08p08800 Brassica napus HOM05D000471 ORTHO05D000199 3.7e-06 56.2 161 27.3
BolC9t56793H Brassica oleracea HOM05D010384 ORTHO05D013516 8.2e-06 55.1 170 27.6


User provided reference genes

Program Settings