Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g10865 Brassica carinata HOM05D000815 ORTHO05D000636 1.2e-76 290.0 181 100.0
BcaB02g10864 Brassica carinata HOM05D000815 ORTHO05D000636 5.7e-58 228.0 179 86.6
BcaC08g44158 Brassica carinata HOM05D000815 ORTHO05D000636 3.4e-50 202.2 183 78.1
BolC6t36747H Brassica oleracea HOM05D000815 ORTHO05D000636 1.4e-40 170.2 164 75.6
C06p15590 Brassica napus HOM05D000815 ORTHO05D000636 4.1e-40 168.7 164 75.0
BcaC01g01430 Brassica carinata HOM05D000815 ORTHO05D000636 3.6e-36 155.6 179 67.6
C03p91940 Brassica napus HOM05D000815 ORTHO05D000636 3.6e-36 155.6 179 67.6
A08p01260 Brassica napus HOM05D000815 ORTHO05D000636 1.4e-35 153.7 179 66.5
BolC3t21514H Brassica oleracea HOM05D000815 ORTHO05D000636 4.0e-35 152.1 179 66.5
A05p17740 Brassica napus HOM05D000815 ORTHO05D000636 5.2e-35 151.8 169 72.2
BraA05t20666Z Brassica rapa HOM05D000815 ORTHO05D000636 5.2e-35 151.8 167 71.9
BraA08t32177Z Brassica rapa HOM05D000815 ORTHO05D000636 6.8e-35 151.4 179 65.9
Sp1g40500 Schrenkiella parvula HOM05D000815 ORTHO05D000636 1.4e-32 143.7 210 62.4
BcaC08g43587 Brassica carinata HOM05D000815 ORTHO05D000636 8.6e-30 134.4 176 59.7
C06p09860 Brassica napus HOM05D000815 ORTHO05D000636 1.5e-29 133.7 175 60.0
BolC6t36057H Brassica oleracea HOM05D000815 ORTHO05D000636 1.5e-29 133.7 175 60.0
Carub.0001s4329 Capsella rubella HOM05D000815 ORTHO05D000636 4.3e-29 132.1 213 58.7
AL1G62760 Arabidopsis lyrata HOM05D000815 ORTHO05D000636 9.5e-29 131.0 208 60.1
AT1G54060 Arabidopsis thaliana HOM05D000815 ORTHO05D000636 2.8e-28 129.4 212 59.0
Thhalv10011582m.g Eutrema salsugineum HOM05D000815 ORTHO05D000636 1.4e-27 127.1 209 57.9
BcaB04g17032 Brassica carinata HOM05D000815 ORTHO05D000636 5.8e-26 121.7 160 64.4
BraA06t23272Z Brassica rapa HOM05D000815 ORTHO05D000636 2.9e-25 119.4 175 62.9
A06p00580 Brassica napus HOM05D000815 ORTHO05D000636 1.4e-24 117.1 175 62.3
CARHR044390 Cardamine hirsuta HOM05D000815 ORTHO05D000636 1.5e-21 107.1 231 49.8
Sp3g12460 Schrenkiella parvula HOM05D000815 ORTHO05D000636 4.7e-20 102.1 195 41.5
THA.LOC104815613 Tarenaya hassleriana HOM05D000815 ORTHO05D000636 2.6e-18 96.3 180 50.0
Carub.0003s1381 Capsella rubella HOM05D000815 ORTHO05D000636 1.1e-16 90.9 167 48.5
Aa31LG10G1360 Aethionema arabicum HOM05D000815 ORTHO05D000636 6.6e-14 81.6 87 62.1
THA.LOC104822668 Tarenaya hassleriana HOM05D000815 ORTHO05D000636 1.2e-12 77.4 152 44.7
Sp3g12430 Schrenkiella parvula HOM05D000815 ORTHO05D000636 2.9e-09 66.2 120 40.0
BcaC01g03954 Brassica carinata HOM05D000815 ORTHO05D000636 1.9e-08 63.5 123 47.2
BolC3t16942H Brassica oleracea HOM05D000815 ORTHO05D000636 1.9e-08 63.5 123 49.6
Aa31LG8G1420 Aethionema arabicum HOM05D000815 ORTHO05D000636 4.2e-08 62.4 153 43.8
Carub.0003s1378 Capsella rubella HOM05D000815 ORTHO05D000636 5.4e-08 62.0 133 45.9
AL3G26420 Arabidopsis lyrata HOM05D000815 ORTHO05D000636 5.1e-06 55.5 163 39.3
Thhalv10020691m.g Eutrema salsugineum HOM05D000815 ORTHO05D000636 6.6e-06 55.1 151 41.7


User provided reference genes

Program Settings