Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g10814 Brassica carinata HOM05D001038 ORTHO05D010946 1.6e-208 729.2 370 100.0
C09p42070 Brassica napus HOM05D001038 ORTHO05D021947 3.8e-93 345.9 398 48.7
BcaB06g28131 Brassica carinata HOM05D001038 ORTHO05D000395 3.0e-90 336.3 354 53.1
A01p24490 Brassica napus HOM05D001038 ORTHO05D021947 1.7e-88 330.5 345 50.7
BcaC06g35484 Brassica carinata HOM05D001038 ORTHO05D000395 1.1e-87 327.8 334 52.4
BcaB01g01303 Brassica carinata HOM05D001038 ORTHO05D000395 2.4e-87 326.6 397 50.9
C07p15560 Brassica napus HOM05D001038 ORTHO05D000395 4.6e-86 322.4 344 50.6
BcaC05g26744 Brassica carinata HOM05D001038 ORTHO05D000395 8.0e-83 311.6 396 45.5
BcaB06g28161 Brassica carinata HOM05D001038 ORTHO05D000395 1.2e-81 307.8 348 47.7
BcaC03g17929 Brassica carinata HOM05D001038 ORTHO05D000395 1.7e-80 303.9 345 48.1
BcaC05g25823 Brassica carinata HOM05D001038 ORTHO05D014932 2.7e-70 270.0 348 45.1
C06p10570 Brassica napus HOM05D001038 ORTHO05D014932 3.5e-70 269.6 348 44.5
BolC7t41626H Brassica oleracea HOM05D001038 ORTHO05D014932 3.5e-70 269.6 348 44.8
BcaB06g26720 Brassica carinata HOM05D001038 ORTHO05D000395 9.2e-63 245.0 339 41.0
BcaB03g16061 Brassica carinata HOM05D001038 ORTHO05D000395 1.2e-62 244.6 290 49.3
BcaC07g37762 Brassica carinata HOM05D001038 ORTHO05D000395 7.8e-62 241.9 349 41.5
BolC8t48147H Brassica oleracea HOM05D001038 ORTHO05D000395 7.8e-62 241.9 349 41.5
A09p34780 Brassica napus HOM05D001038 ORTHO05D000395 1.7e-61 240.7 337 41.8
BraA02t07755Z Brassica rapa HOM05D001038 ORTHO05D000395 3.9e-61 239.6 347 41.8
BcaB04g17766 Brassica carinata HOM05D001038 ORTHO05D000395 9.6e-60 235.0 355 40.3
BcaB04g17277 Brassica carinata HOM05D001038 ORTHO05D014932 8.1e-59 231.9 340 40.0
BcaNung00229 Brassica carinata HOM05D001038 ORTHO05D000395 3.1e-58 229.9 355 39.7
BraA04t17267Z Brassica rapa HOM05D001038 ORTHO05D014932 2.0e-57 227.3 340 39.4
BraA02t08689Z Brassica rapa HOM05D001038 ORTHO05D010763 2.2e-56 223.8 304 43.4
BolC6t36138H Brassica oleracea HOM05D001038 ORTHO05D014932 2.9e-56 223.4 334 41.3
BcaNung04782 Brassica carinata HOM05D001038 ORTHO05D014932 4.3e-52 209.5 301 41.9
BcaB03g16620 Brassica carinata HOM05D001038 ORTHO05D000395 1.5e-49 201.1 276 41.3
BcaB02g10843 Brassica carinata HOM05D001038 ORTHO05D000395 1.9e-44 184.1 276 41.7
BcaB06g27965 Brassica carinata HOM05D001038 ORTHO05D000395 1.4e-42 177.9 340 35.3
BcaB08g36369 Brassica carinata HOM05D001038 ORTHO05D014932 1.4e-39 167.9 294 36.1
BcaB02g10939 Brassica carinata HOM05D001038 ORTHO05D000395 5.5e-39 166.0 344 30.8
BcaB05g25087 Brassica carinata HOM05D001038 ORTHO05D000395 2.1e-38 164.1 342 30.4
BcaB06g26021 Brassica carinata HOM05D001038 ORTHO05D000395 3.5e-38 163.3 308 35.1
BraA01t02230Z Brassica rapa HOM05D001038 ORTHO05D000395 7.9e-38 162.2 183 48.6
C07p30940 Brassica napus HOM05D001038 ORTHO05D014932 1.8e-37 161.0 265 36.6
BcaB01g01614 Brassica carinata HOM05D001038 ORTHO05D014932 2.3e-37 160.6 271 37.6
BcaB08g35416 Brassica carinata HOM05D001038 ORTHO05D017560 2.5e-36 157.1 304 36.2
C05p37200 Brassica napus HOM05D001038 ORTHO05D017560 5.6e-36 156.0 337 30.3
BcaB01g01915 Brassica carinata HOM05D001038 ORTHO05D000395 1.6e-35 154.5 315 35.2
C07p12170 Brassica napus HOM05D001038 ORTHO05D010763 3.1e-34 150.2 297 36.0
BcaB03g16260 Brassica carinata HOM05D001038 ORTHO05D019962 2.0e-33 147.5 347 31.4
BolC7t40492H Brassica oleracea HOM05D001038 ORTHO05D010763 2.6e-33 147.1 293 31.7
BcaB08g34565 Brassica carinata HOM05D001038 ORTHO05D000395 3.8e-32 143.3 335 32.2
BolC7t41684H Brassica oleracea HOM05D001038 ORTHO05D010763 4.9e-32 142.9 384 30.5
BolC7t43636H Brassica oleracea HOM05D001038 ORTHO05D000395 8.4e-32 142.1 230 38.3
A04p22180 Brassica napus HOM05D001038 ORTHO05D000395 1.1e-31 141.7 330 30.0
BcaC04g20563 Brassica carinata HOM05D001038 ORTHO05D021947 1.4e-31 141.4 164 50.0
BolC9t55839H Brassica oleracea HOM05D001038 ORTHO05D016703 1.4e-31 141.4 333 30.9
BraA06t25412Z Brassica rapa HOM05D001038 ORTHO05D017560 1.4e-31 141.4 345 31.0
BolC9t57089H Brassica oleracea HOM05D001038 ORTHO05D021947 1.9e-31 141.0 164 50.0
BolC7t41164H Brassica oleracea HOM05D001038 ORTHO05D000395 3.2e-31 140.2 291 33.0
BolC7t41688H Brassica oleracea HOM05D001038 ORTHO05D000395 7.1e-31 139.0 298 34.6
BolC7t42043H Brassica oleracea HOM05D001038 ORTHO05D000395 1.6e-30 137.9 135 54.8
BcaB06g25472 Brassica carinata HOM05D001038 ORTHO05D010763 3.5e-30 136.7 322 29.8
BcaB02g06555 Brassica carinata HOM05D001038 ORTHO05D010763 1.0e-29 135.2 333 28.8
BcaB01g00832 Brassica carinata HOM05D001038 ORTHO05D000395 6.7e-29 132.5 343 29.2
BolC2t11143H Brassica oleracea HOM05D001038 ORTHO05D024385 8.7e-29 132.1 297 32.7
C09p60390 Brassica napus HOM05D001038 ORTHO05D016703 7.4e-28 129.0 330 29.1
BolC1t02113H Brassica oleracea HOM05D001038 ORTHO05D041007 7.4e-28 129.0 202 38.6
C01p21870 Brassica napus HOM05D001038 ORTHO05D041007 9.6e-28 128.6 202 38.6
BraA09t41072Z Brassica rapa HOM05D001038 ORTHO05D000395 2.1e-27 127.5 392 26.5
BcaB02g11159 Brassica carinata HOM05D001038 ORTHO05D000395 4.8e-27 126.3 151 49.7
BcaC08g46980 Brassica carinata HOM05D001038 ORTHO05D000395 6.3e-27 125.9 282 29.1
BcaB06g26982 Brassica carinata HOM05D001038 ORTHO05D000395 2.4e-26 124.0 300 27.0
C07p34820 Brassica napus HOM05D001038 ORTHO05D000395 3.1e-26 123.6 267 33.0
BraSC37t46126Z Brassica rapa HOM05D001038 ORTHO05D016776 3.1e-26 123.6 243 29.6
BolC4t27749H Brassica oleracea HOM05D001038 ORTHO05D016776 4.1e-26 123.2 243 29.6
C02p52080 Brassica napus HOM05D001038 ORTHO05D019962 6.9e-26 122.5 332 27.4
BolC2t11293H Brassica oleracea HOM05D001038 ORTHO05D019962 6.9e-26 122.5 332 27.4
A10p08770 Brassica napus HOM05D001038 ORTHO05D016776 3.4e-25 120.2 281 26.7
BcaB05g22891 Brassica carinata HOM05D001038 ORTHO05D010763 4.5e-25 119.8 318 27.0
BolC9t58942H Brassica oleracea HOM05D001038 ORTHO05D010763 7.6e-25 119.0 296 30.4
A01p23200 Brassica napus HOM05D001038 ORTHO05D000395 1.7e-24 117.9 143 48.3
BcaNung01360 Brassica carinata HOM05D001038 ORTHO05D010763 2.2e-24 117.5 313 28.1
BcaB07g33328 Brassica carinata HOM05D001038 ORTHO05D010763 2.9e-24 117.1 314 28.3
C07p09720 Brassica napus HOM05D001038 ORTHO05D010763 1.1e-23 115.2 297 32.7
BolC7t41410H Brassica oleracea HOM05D001038 ORTHO05D010763 2.5e-23 114.0 297 32.7
BcaB06g26737 Brassica carinata HOM05D001038 ORTHO05D010763 3.2e-23 113.6 321 26.8
A05p28250 Brassica napus HOM05D001038 ORTHO05D019929 7.2e-23 112.5 339 28.3
BraA05t21706Z Brassica rapa HOM05D001038 ORTHO05D019929 7.2e-23 112.5 339 28.3
BraA05t19810Z Brassica rapa HOM05D001038 ORTHO05D016703 9.3e-23 112.1 335 26.0
BraA06t25336Z Brassica rapa HOM05D001038 ORTHO05D028293 9.3e-23 112.1 130 44.6
A07p02760 Brassica napus HOM05D005627 ORTHO05D028293 1.2e-22 111.7 143 41.3
BraA10t43039Z Brassica rapa HOM05D001038 ORTHO05D000395 1.6e-22 111.3 330 27.0
A05p27890 Brassica napus HOM05D005627 ORTHO05D028293 2.7e-22 110.5 143 42.0
BraA07t28076Z Brassica rapa HOM05D001038 ORTHO05D028293 2.7e-22 110.5 130 43.1
A02p12560 Brassica napus HOM05D001038 ORTHO05D019929 3.5e-22 110.2 339 28.3
C09p39680 Brassica napus HOM05D001038 ORTHO05D010763 4.6e-22 109.8 297 29.6
BcaC04g20742 Brassica carinata HOM05D001038 ORTHO05D010763 6.1e-22 109.4 337 28.5
BcaNung00468 Brassica carinata HOM05D001038 ORTHO05D000395 6.1e-22 109.4 297 30.3
Thhalv10002771m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 2.3e-21 107.5 328 25.0
A06p10190 Brassica napus HOM05D001038 ORTHO05D014932 5.1e-21 106.3 135 44.4
BcaB01g02416 Brassica carinata HOM05D011654 ORTHO05D010946 8.7e-21 105.5 303 28.7
BcaB01g01205 Brassica carinata HOM05D001038 ORTHO05D000395 1.1e-20 105.1 291 30.9
C01p21260 Brassica napus HOM05D001038 ORTHO05D000395 3.3e-20 103.6 113 50.4
BcaB08g36238 Brassica carinata HOM05D011654 ORTHO05D010946 4.3e-20 103.2 303 28.1
BcaC09g49024 Brassica carinata HOM05D001038 ORTHO05D000395 4.3e-20 103.2 346 26.9
BcaB03g16464 Brassica carinata HOM05D001038 ORTHO05D018589 5.7e-20 102.8 291 26.8
BcaB04g18537 Brassica carinata HOM05D001038 ORTHO05D000395 5.7e-20 102.8 292 31.8
C08p22730 Brassica napus HOM05D001038 ORTHO05D016776 7.4e-20 102.4 254 26.0
BcaB07g32567 Brassica carinata HOM05D001038 ORTHO05D010763 9.7e-20 102.1 267 29.6
C05p48930 Brassica napus HOM05D001038 ORTHO05D016716 1.3e-19 101.7 332 24.4
BolC5t33633H Brassica oleracea HOM05D001038 ORTHO05D016716 1.3e-19 101.7 332 24.4
BcaC01g03929 Brassica carinata HOM05D001038 ORTHO05D010946 2.8e-19 100.5 312 24.0
AT2G07240 Arabidopsis thaliana HOM05D001038 ORTHO05D010763 4.8e-19 99.8 303 25.7
BcaB01g01507 Brassica carinata HOM05D011654 ORTHO05D010946 8.2e-19 99.0 295 28.5
C08p05940 Brassica napus HOM05D001038 ORTHO05D024385 8.2e-19 99.0 190 34.7
BcaB03g12379 Brassica carinata HOM05D001038 ORTHO05D000395 1.1e-18 98.6 259 27.0
A02p27290 Brassica napus HOM05D001038 ORTHO05D000395 4.1e-18 96.7 110 48.2
C05p34670 Brassica napus HOM05D001038 ORTHO05D032287 1.2e-17 95.1 332 26.8
BraA02t06821Z Brassica rapa HOM05D001038 ORTHO05D000395 5.9e-17 92.8 268 29.5
BolC7t42716H Brassica oleracea HOM05D001038 ORTHO05D019929 1.3e-16 91.7 202 29.2
BolC9t56412H Brassica oleracea HOM05D001038 ORTHO05D000395 1.3e-16 91.7 282 29.8
BcaC06g34914 Brassica carinata HOM05D001038 ORTHO05D019929 1.7e-16 91.3 296 29.7
BolC5t31712H Brassica oleracea HOM05D001038 ORTHO05D032287 1.7e-16 91.3 344 25.6
BolC5t32403H Brassica oleracea HOM05D001038 ORTHO05D016716 1.7e-16 91.3 265 28.7
Thhalv10023964m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 1.7e-16 91.3 331 26.3
BolC2t09973H Brassica oleracea HOM05D001038 ORTHO05D021697 2.9e-16 90.5 189 30.7
BcaC08g45228 Brassica carinata HOM05D001038 ORTHO05D010946 5.0e-16 89.7 325 22.8
A10p07430 Brassica napus HOM05D001038 ORTHO05D042212 5.0e-16 89.7 99 45.5
C06p06920 Brassica napus HOM05D001038 ORTHO05D000395 5.0e-16 89.7 91 54.9
C07p21850 Brassica napus HOM05D001038 ORTHO05D019929 8.5e-16 89.0 202 29.2
BcaB07g30174 Brassica carinata HOM05D001038 ORTHO05D000395 1.4e-15 88.2 294 27.9
A05p23600 Brassica napus HOM05D001038 ORTHO05D018589 1.9e-15 87.8 289 26.3
C02p45450 Brassica napus HOM05D001038 ORTHO05D017560 1.9e-15 87.8 241 26.1
BraA05t21228Z Brassica rapa HOM05D001038 ORTHO05D018589 1.9e-15 87.8 289 26.3
Carub.0004s1123 Capsella rubella HOM05D001038 ORTHO05D000395 3.2e-15 87.0 226 30.1
Thhalv10002975m.g Eutrema salsugineum HOM05D001038 ORTHO05D000395 3.2e-15 87.0 294 27.9
Thhalv10029129m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 4.2e-15 86.7 359 22.3
C07p12200 Brassica napus HOM05D001038 ORTHO05D010763 5.5e-15 86.3 180 35.0
BraSC36t46060Z Brassica rapa HOM05D005627 ORTHO05D042212 5.5e-15 86.3 99 44.4
C09p12400 Brassica napus HOM05D001038 ORTHO05D019962 7.2e-15 85.9 216 31.9
C02p39590 Brassica napus HOM05D001038 ORTHO05D021697 9.4e-15 85.5 189 29.6
BcaB02g10826 Brassica carinata HOM05D001038 ORTHO05D021697 1.6e-14 84.7 141 31.9
BcaB01g01825 Brassica carinata HOM05D001038 ORTHO05D000395 2.1e-14 84.3 186 29.6
BolC5t32344H Brassica oleracea HOM05D001038 ORTHO05D017560 2.1e-14 84.3 307 24.4
Thhalv10023140m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 4.6e-14 83.2 292 22.3
C02p24050 Brassica napus HOM05D001038 ORTHO05D000395 6.1e-14 82.8 117 42.7
A04p16280 Brassica napus HOM05D001038 ORTHO05D014932 7.9e-14 82.4 106 44.3
Thhalv10003372m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 1.4e-13 81.6 332 25.6
BraA10t43452Z Brassica rapa HOM05D001038 ORTHO05D019929 2.3e-13 80.9 104 45.2
BolC2t08169H Brassica oleracea HOM05D001038 ORTHO05D010946 3.0e-13 80.5 221 24.9
BraA06t24545Z Brassica rapa HOM05D001038 ORTHO05D024045 3.9e-13 80.1 267 26.6
C06p00840 Brassica napus HOM05D001038 ORTHO05D010946 8.8e-13 79.0 322 20.8
C03p52030 Brassica napus HOM05D001038 ORTHO05D000395 1.5e-12 78.2 162 30.2
C09p31530 Brassica napus HOM05D020314 ORTHO05D032005 1.5e-12 78.2 329 27.1
BolC3t17485H Brassica oleracea HOM05D001038 ORTHO05D000395 1.5e-12 78.2 162 30.2
BolC2t07874H Brassica oleracea HOM05D001038 ORTHO05D010946 2.0e-12 77.8 256 26.6
C04p58380 Brassica napus HOM05D001038 ORTHO05D010763 3.3e-12 77.0 162 29.0
C05p36210 Brassica napus HOM05D001038 ORTHO05D017560 3.3e-12 77.0 268 23.5
BolC3t15494H Brassica oleracea HOM05D001038 ORTHO05D010946 1.7e-11 74.7 340 22.9
C03p31470 Brassica napus HOM05D001038 ORTHO05D010946 2.8e-11 73.9 318 24.2
C07p18290 Brassica napus HOM05D001038 ORTHO05D010763 4.8e-11 73.2 103 39.8
Thhalv10003408m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 4.8e-11 73.2 221 24.9
BcaB08g34843 Brassica carinata HOM05D001038 ORTHO05D010946 1.4e-10 71.6 305 23.0
A02p37020 Brassica napus HOM05D001038 ORTHO05D000395 1.8e-10 71.2 62 61.3
Thhalv10001261m.g Eutrema salsugineum HOM05D001038 ORTHO05D010763 2.4e-10 70.9 267 26.6
BcaB04g19629 Brassica carinata HOM05D001038 ORTHO05D000395 3.1e-10 70.5 131 38.2
Carub.0013s0014 Capsella rubella HOM05D001038 ORTHO05D000395 6.9e-10 69.3 192 30.2
Thhalv10003093m.g Eutrema salsugineum HOM05D001038 ORTHO05D010763 3.4e-09 67.0 212 26.9
BcaB06g28199 Brassica carinata HOM05D001038 ORTHO05D010946 7.7e-09 65.9 323 26.3
BcaC01g04978 Brassica carinata HOM05D001038 ORTHO05D010946 1.7e-08 64.7 105 32.4
A04p08430 Brassica napus HOM05D001038 ORTHO05D010946 5.0e-08 63.2 98 30.6
BcaC06g35713 Brassica carinata HOM05D001038 ORTHO05D024045 1.4e-07 61.6 182 26.9
C06p38180 Brassica napus HOM05D001038 ORTHO05D000395 1.4e-07 61.6 107 35.5
A03p31860 Brassica napus HOM05D001038 ORTHO05D024045 1.9e-07 61.2 193 31.1
A03p51100 Brassica napus HOM05D001038 ORTHO05D024045 1.9e-07 61.2 193 31.1
A09p28390 Brassica napus HOM05D001038 ORTHO05D000395 2.5e-07 60.8 110 38.2
BraA04t16494Z Brassica rapa HOM05D001038 ORTHO05D021947 4.2e-07 60.1 106 39.6
BcaC04g22987 Brassica carinata HOM05D062974 ORTHO05D000395 5.5e-07 59.7 133 34.6
Thhalv10015415m.g Eutrema salsugineum HOM05D001038 ORTHO05D010763 5.5e-07 59.7 224 25.0
BcaB04g17690 Brassica carinata HOM05D001038 ORTHO05D018589 7.2e-07 59.3 143 30.8
C07p11760 Brassica napus HOM05D001038 ORTHO05D024045 7.2e-07 59.3 135 28.9
BolC4t25613H Brassica oleracea HOM05D001038 ORTHO05D016776 7.2e-07 59.3 208 24.5
BcaC08g44172 Brassica carinata HOM05D001038 ORTHO05D018589 9.4e-07 58.9 183 24.6
BcaC08g44444 Brassica carinata HOM05D001038 ORTHO05D016716 9.4e-07 58.9 135 28.9
BcaC04g21625 Brassica carinata HOM05D001038 ORTHO05D016703 1.2e-06 58.5 132 31.8
BcaB05g24425 Brassica carinata HOM05D001038 ORTHO05D024385 2.1e-06 57.8 91 34.1
BolC4t26248H Brassica oleracea HOM05D001038 ORTHO05D018589 2.1e-06 57.8 264 24.2
Thhalv10015447m.g Eutrema salsugineum HOM05D001038 ORTHO05D010763 2.7e-06 57.4 178 26.4
A04p08070 Brassica napus HOM05D001038 ORTHO05D021947 3.6e-06 57.0 106 38.7
C04p20500 Brassica napus HOM05D001038 ORTHO05D010946 3.6e-06 57.0 124 25.0
BolC4t23575H Brassica oleracea HOM05D001038 ORTHO05D010946 3.6e-06 57.0 124 25.0
BraA07t28383Z Brassica rapa HOM05D001038 ORTHO05D032078 3.6e-06 57.0 101 30.7
C04p40350 Brassica napus HOM05D001038 ORTHO05D016776 6.1e-06 56.2 134 26.1
BcaC01g03622 Brassica carinata HOM05D001038 ORTHO05D016776 7.9e-06 55.8 122 27.0
BraA06t25315Z Brassica rapa HOM05D001038 ORTHO05D033066 7.9e-06 55.8 101 34.7


User provided reference genes

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