Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g10018 Brassica carinata HOM05D004813 ORTHO05D005889 5.7e-66 254.6 180 100.0
BcaB02g10019 Brassica carinata HOM05D004813 ORTHO05D005889 7.4e-66 254.2 179 100.0
BcaC04g23133 Brassica carinata HOM05D004813 ORTHO05D005889 2.3e-51 206.1 176 86.9
BolC9t54072H Brassica oleracea HOM05D004813 ORTHO05D005889 2.3e-51 206.1 176 86.9
Carub.0008s2799 Capsella rubella HOM05D004813 ORTHO05D005889 1.3e-49 200.3 176 80.7
Sp2g30180 Schrenkiella parvula HOM05D004813 ORTHO05D005889 4.8e-49 198.4 176 84.7
A09p09960 Brassica napus HOM05D004813 ORTHO05D005889 6.3e-49 198.0 176 87.5
C09p11820 Brassica napus HOM05D004813 ORTHO05D005889 3.5e-47 192.2 176 83.5
BraA07t29465Z Brassica rapa HOM05D004813 ORTHO05D005889 4.5e-47 191.8 176 81.8
BraA09t36642Z Brassica rapa HOM05D004813 ORTHO05D005889 5.9e-47 191.4 176 86.4
AT5G66540 Arabidopsis thaliana HOM05D004813 ORTHO05D005889 5.5e-45 184.9 181 79.6
A07p17440 Brassica napus HOM05D004813 ORTHO05D005889 9.4e-45 184.1 176 80.1
Carub.0002s0981 Capsella rubella HOM05D004813 ORTHO05D005889 2.1e-44 183.0 177 78.5
Thhalv10003981m.g Eutrema salsugineum HOM05D004813 ORTHO05D005889 8.0e-44 181.0 176 77.8
BcaNung05723 Brassica carinata HOM05D004813 ORTHO05D005889 2.3e-43 179.5 182 82.4
AL8G44980 Arabidopsis lyrata HOM05D004813 ORTHO05D005889 6.7e-43 177.9 178 80.9
CARHR281210 Cardamine hirsuta HOM05D004813 ORTHO05D005889 3.3e-42 175.6 177 72.3
Aa31LG1G15060 Aethionema arabicum HOM05D004813 ORTHO05D005889 1.7e-38 163.3 177 69.5
COL.COLO4_30069 Corchorus olitorius HOM05D004813 ORTHO05D005889 1.1e-29 134.0 181 62.4
TWI14G0980 Tripterygium wilfordii HOM05D004813 ORTHO05D005889 1.1e-29 134.0 117 57.3
Cc04_g12130 Coffea canephora HOM05D004813 ORTHO05D005889 1.5e-29 133.7 107 61.7
Cpa.g.sc76.31 Carica papaya HOM05D004813 ORTHO05D005889 3.2e-29 132.5 177 70.1
Ah.01g009190 Amaranthus hybridus HOM05D004813 ORTHO05D005889 9.5e-29 131.0 100 65.0
Dinv20637 Davidia involucrata HOM05D004813 ORTHO05D005889 9.5e-29 131.0 183 56.3
MELO3C026213.2 Cucumis melo HOM05D004813 ORTHO05D005889 3.6e-28 129.0 184 62.0
Nn4g22713 Nelumbo nucifera HOM05D004813 ORTHO05D005889 3.6e-28 129.0 98 64.3
Glyma.05G038800 Glycine max HOM05D004813 ORTHO05D005889 4.7e-28 128.6 110 57.3
SGA_v2.0_scaffold114G31819 Striga asiatica HOM05D004813 ORTHO05D005889 1.4e-27 127.1 104 61.5
Thecc.03G014500 Theobroma cacao HOM05D004813 ORTHO05D005889 1.8e-27 126.7 181 56.9
GSVIVG01007723001 Vitis vinifera HOM05D004813 ORTHO05D005889 1.8e-27 126.7 111 59.5
CSS0044871 Camellia sinensis var. sinensis HOM05D004813 ORTHO05D005889 3.0e-27 125.9 100 61.0
CsaV3_1G000640 Cucumis sativus L. HOM05D004813 ORTHO05D005889 3.0e-27 125.9 91 67.0
CSS0009747 Camellia sinensis var. sinensis HOM05D004813 ORTHO05D005889 4.0e-27 125.6 100 61.0
Haze_07517 Corylus avellana HOM05D004813 ORTHO05D005889 4.0e-27 125.6 107 55.1
Glyma.17G088200 Glycine max HOM05D004813 ORTHO05D005889 5.2e-27 125.2 106 57.5
TWI23G0210 Tripterygium wilfordii HOM05D004813 ORTHO05D005889 5.2e-27 125.2 112 58.0
Oeu016404.1 Olea europaea HOM05D004813 ORTHO05D005889 8.8e-27 124.4 112 56.2
arahy.Tifrunner.gnm1.ann1.9LWV25 Arachis hypogaea HOM05D004813 ORTHO05D005889 1.2e-26 124.0 117 57.3
ClCG06G017810 Citrullus lanatus HOM05D004813 ORTHO05D005889 1.2e-26 124.0 130 53.1
Sopen03g031900 Solanum pennellii HOM05D004813 ORTHO05D005889 1.2e-26 124.0 117 53.8
PGSC0003DMG400018096 Solanum tuberosum HOM05D004813 ORTHO05D005889 1.2e-26 124.0 117 53.8
Manes.14G064300 Manihot esculenta HOM05D004813 ORTHO05D005889 1.5e-26 123.6 92 64.1
Rhsim12G0165800 Rhododendron simsii HOM05D004813 ORTHO05D005889 1.5e-26 123.6 91 63.7
Hund02755 Selenicereus undatus HOM05D004813 ORTHO05D005889 1.5e-26 123.6 87 64.4
Solyc03g112820.4 Solanum lycopersicum HOM05D004813 ORTHO05D005889 2.0e-26 123.2 117 53.8
CANSAT80G1068 Cannabis sativa HOM05D004813 ORTHO05D005889 2.6e-26 122.9 99 59.6
RcHm_v2.0_Chr7g0193361 Rosa chinensis HOM05D004813 ORTHO05D005889 2.6e-26 122.9 118 55.1
Peaxi162Scf00089g01844 Petunia axillaris HOM05D004813 ORTHO05D005889 3.4e-26 122.5 103 56.3
QL10p010983 Quercus lobata HOM05D004813 ORTHO05D005889 4.4e-26 122.1 182 59.3
arahy.Tifrunner.gnm1.ann1.J26J1M Arachis hypogaea HOM05D004813 ORTHO05D005889 5.7e-26 121.7 116 56.9
TAR629G2765 Trochodendron aralioides HOM05D004813 ORTHO05D005889 5.7e-26 121.7 182 59.9
Eucgr.K02829 Eucalyptus grandis HOM05D004813 ORTHO05D005889 7.5e-26 121.3 92 63.0
Lj4g0001275 Lotus japonicus HOM05D004813 ORTHO05D005889 7.5e-26 121.3 91 64.8
Potri.015G078500 Populus trichocarpa HOM05D004813 ORTHO05D005889 9.8e-26 120.9 179 57.0
Sc04g0001740 Simmondsia chinensis HOM05D004813 ORTHO05D005889 9.8e-26 120.9 112 53.6
Ciclev10019513m.g Citrus clementina HOM05D004813 ORTHO05D005889 1.3e-25 120.6 108 55.6
Lalb_Chr07g0182801 Lupinus albus HOM05D004813 ORTHO05D005889 1.3e-25 120.6 91 64.8
Phvul.003G201700 Phaseolus vulgaris HOM05D004813 ORTHO05D005889 1.3e-25 120.6 122 52.5
Potri.012G082600 Populus trichocarpa HOM05D004813 ORTHO05D005889 1.3e-25 120.6 187 50.3
Medtr4g105590 Medicago truncatula HOM05D004813 ORTHO05D005889 1.7e-25 120.2 95 62.1
Sed0018710 Sechium edule HOM05D004813 ORTHO05D005889 1.7e-25 120.2 90 67.8
VMungo1215G0389 Vigna mungo HOM05D004813 ORTHO05D005889 1.7e-25 120.2 114 51.8
Actinidia19105 Actinidia chinensis HOM05D004813 ORTHO05D005889 2.2e-25 119.8 89 65.2
Nitab4.5_0000514g0060 Nicotiana tabacum HOM05D004813 ORTHO05D005889 2.2e-25 119.8 182 55.5
Sabra15G0103000 Salix brachista HOM05D004813 ORTHO05D005889 2.2e-25 119.8 185 51.9
Ca_21934_v3 Cicer arietinum L. HOM05D004813 ORTHO05D005889 2.8e-25 119.4 124 50.0
EL10Ac9g21440 Beta vulgaris HOM05D004813 ORTHO05D005889 3.7e-25 119.0 90 62.2
Lsat_1_v5_gn_4_75841 Lactuca sativa HOM05D004813 ORTHO05D005889 3.7e-25 119.0 119 51.3
PGR044G0958 Punica granatum HOM05D004813 ORTHO05D005889 3.7e-25 119.0 135 48.9
Cfa019150 Carpinus fangiana HOM05D004813 ORTHO05D005889 4.9e-25 118.6 105 52.4
Gorai.008G296300 Gossypium raimondii HOM05D004813 ORTHO05D005889 6.3e-25 118.2 184 59.2
vmacro16622 Vaccinium macrocarpon HOM05D004813 ORTHO05D005889 8.3e-25 117.9 180 53.9
Gohir.A12G275100 Gossypium hirsutum HOM05D004813 ORTHO05D005889 1.1e-24 117.5 185 58.4
Lj9A420T39 Lonicera japonica HOM05D004813 ORTHO05D005889 1.8e-24 116.7 91 61.5
AUR62010096 Chenopodium quinoa HOM05D004813 ORTHO05D005889 2.4e-24 116.3 110 53.6
Gohir.D12G275800 Gossypium hirsutum HOM05D004813 ORTHO05D005889 2.4e-24 116.3 186 59.7
MD06G1172400 Malus domestica HOM05D004813 ORTHO05D005889 2.4e-24 116.3 97 57.7
Atru.chr8.1447 Acer truncatum HOM05D004813 ORTHO05D005889 3.1e-24 115.9 125 52.8
CDE05G0644 Ceratophyllum demersum HOM05D004813 ORTHO05D005889 4.1e-24 115.5 90 61.1
MBI16_g39216_MAGBIO Magnolia biondii HOM05D004813 ORTHO05D005889 4.1e-24 115.5 91 63.7
Prupe.5G171700 Prunus persica HOM05D004813 ORTHO05D005889 4.1e-24 115.5 96 60.4
DCAR_031351 Daucus carota HOM05D004813 ORTHO05D005889 5.4e-24 115.2 86 66.3
MBI16_g37492_MAGBIO Magnolia biondii HOM05D004813 ORTHO05D005889 7.0e-24 114.8 91 63.7
MBI17_g17505_MAGBIO Magnolia biondii HOM05D004813 ORTHO05D005889 9.2e-24 114.4 91 62.6
ECA232G2493 Erigeron canadensis HOM05D004813 ORTHO05D005889 1.6e-23 113.6 111 51.4
HanXRQChr15g0463041 Helianthus annuus HOM05D004813 ORTHO05D005889 1.6e-23 113.6 119 52.9
CiPaw.11G024600 Carya illinoinensis HOM05D004813 ORTHO05D005889 2.0e-23 113.2 178 55.1
Haze_17000 Corylus avellana HOM05D004813 ORTHO05D005889 2.7e-23 112.8 110 52.7
Psat4g058360 Pisum sativum HOM05D004813 ORTHO05D005889 2.7e-23 112.8 181 43.6
MD14G1178200 Malus domestica HOM05D004813 ORTHO05D005889 3.5e-23 112.5 111 54.1
TPR.G37503 Trifolium pratense HOM05D004813 ORTHO05D005889 4.5e-23 112.1 95 56.8
FvH4_5g05471 Fragaria vesca HOM05D004813 ORTHO05D005889 7.8e-23 111.3 101 58.4
FAN08G2504 Fragaria x ananassa HOM05D004813 ORTHO05D005889 1.0e-22 110.9 115 53.0
FAN04G1884 Fragaria x ananassa HOM05D004813 ORTHO05D005889 1.3e-22 110.5 115 53.0
FAN18G4177 Fragaria x ananassa HOM05D004813 ORTHO05D005889 1.3e-22 110.5 118 52.5
PSO063G0570 Papaver somniferum HOM05D004813 ORTHO05D005889 1.3e-22 110.5 115 52.2
Migut.D01957 Erythranthe guttata HOM05D004813 ORTHO05D005889 2.9e-22 109.4 183 55.2
PSO832G2178 Papaver somniferum HOM05D004813 ORTHO05D005889 5.0e-22 108.6 115 51.3
FAN13G1879 Fragaria x ananassa HOM05D004813 ORTHO05D005889 6.6e-22 108.2 112 53.6
SalBow6G0518 Salvia bowleyana HOM05D004813 ORTHO05D005889 1.9e-21 106.7 110 50.0
FAN18G0441 Fragaria x ananassa HOM05D004813 ORTHO05D005889 2.5e-21 106.3 117 52.1
Aqoxy3G02883 Aquilegia oxysepala HOM05D004813 ORTHO05D005889 3.3e-21 105.9 87 59.8
unitig_0.g15 Utricularia gibba HOM05D004813 ORTHO05D005889 7.3e-21 104.8 114 50.0
Psat4g058280 Pisum sativum HOM05D004813 ORTHO05D005889 3.6e-20 102.4 89 55.1
CAN.G1166.4 Capsicum annuum HOM05D004813 ORTHO05D005889 1.4e-19 100.5 80 58.8
AUR62013092 Chenopodium quinoa HOM05D004813 ORTHO05D005889 9.8e-18 94.4 86 53.5
Atru.chr9.2495 Acer truncatum HOM05D004813 ORTHO05D005889 1.3e-17 94.0 109 45.9
HPP92_018752 Vanilla planifolia HOM05D004813 ORTHO05D005889 1.4e-16 90.5 98 52.0
ATR1091G095 Amborella trichopoda HOM05D004813 ORTHO05D005889 3.2e-16 89.4 112 42.9
SEGI_37748 Sequoiadendron giganteum HOM05D004813 ORTHO05D005889 1.6e-15 87.0 175 48.6
Potri.003G194550 Populus trichocarpa HOM05D004813 ORTHO05D005889 1.5e-13 80.5 85 52.9
BcaC06g34714 Brassica carinata HOM05D000589 ORTHO05D001885 2.5e-13 79.7 46 87.0
Zm00001eb293550 Zea mays HOM05D004813 ORTHO05D005889 3.1e-11 72.8 126 36.5
Os12g0133900 Oryza sativa ssp. japonica HOM05D004813 ORTHO05D005889 5.8e-10 68.6 91 40.7
Pp3c4_31210 Physcomitrium patens HOM05D004813 ORTHO05D005889 7.5e-10 68.2 95 38.9
Os11g0137100 Oryza sativa ssp. japonica HOM05D004813 ORTHO05D005889 1.7e-09 67.0 91 39.6
Mapoly0077s0037 Marchantia polymorpha HOM05D004813 ORTHO05D005889 9.2e-08 61.2 82 43.9
Oeu020911.1 Olea europaea HOM05D004813 ORTHO05D005889 1.3e-06 57.4 115 36.5
SMO367G0656 Selaginella moellendorffii HOM05D004813 ORTHO05D005889 3.9e-06 55.8 58 44.8


User provided reference genes

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