Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g09849 Brassica carinata HOM05D000084 ORTHO05D091813 3.8e-88 328.2 168 100.0
BcaB04g20428 Brassica carinata HOM05D000084 ORTHO05D002966 1.1e-23 114.0 147 49.7
AL8G42460 Arabidopsis lyrata HOM05D000084 ORTHO05D002966 6.3e-19 98.2 80 65.0
Sp2g28050 Schrenkiella parvula HOM05D000084 ORTHO05D002966 4.1e-18 95.5 110 52.7
AT5G64960 Arabidopsis thaliana HOM05D000084 ORTHO05D002966 9.2e-18 94.4 78 64.1
BcaB07g29766 Brassica carinata HOM05D000084 ORTHO05D002966 2.3e-16 89.7 78 65.4
Carub.0008s2579 Capsella rubella HOM05D000084 ORTHO05D002966 1.9e-15 86.7 72 63.9
A02p43590 Brassica napus HOM05D000084 ORTHO05D002966 2.5e-15 86.3 117 51.3
BraA02t09286Z Brassica rapa HOM05D000084 ORTHO05D002966 2.5e-15 86.3 117 50.4
BcaC03g18295 Brassica carinata HOM05D000084 ORTHO05D002966 4.3e-15 85.5 119 49.6
BolC2t12439H Brassica oleracea HOM05D000084 ORTHO05D002966 4.3e-15 85.5 119 49.6
C02p63710 Brassica napus HOM05D000084 ORTHO05D002966 2.8e-14 82.8 79 63.3
CARHR203030 Cardamine hirsuta HOM05D000084 ORTHO05D002966 3.7e-11 72.4 146 38.4
CARHR293810 Cardamine hirsuta HOM05D000084 ORTHO05D002966 4.9e-11 72.0 100 45.0
BcaB02g09847 Brassica carinata HOM05D000824 ORTHO05D021691 4.1e-10 68.9 54 66.7
BolC1t03952H Brassica oleracea HOM05D000084 ORTHO05D002966 4.1e-10 68.9 113 42.5
Thhalv10004018m.g Eutrema salsugineum HOM05D000084 ORTHO05D002966 5.4e-10 68.6 54 68.5
Sp6g33160 Schrenkiella parvula HOM05D000084 ORTHO05D002966 1.6e-09 67.0 116 41.4
AL6G20770 Arabidopsis lyrata HOM05D000084 ORTHO05D002966 3.5e-09 65.9 116 43.1
C01p39970 Brassica napus HOM05D000084 ORTHO05D002966 4.6e-09 65.5 150 38.0
Thhalv10023419m.g Eutrema salsugineum HOM05D000084 ORTHO05D002966 1.7e-08 63.5 111 42.3
BcaB08g37122 Brassica carinata HOM05D000084 ORTHO05D002966 5.0e-08 62.0 128 39.8
BolC3t18382H Brassica oleracea HOM05D000084 ORTHO05D002966 1.1e-07 60.8 122 41.0
C09p67150 Brassica napus HOM05D000084 ORTHO05D002966 2.1e-06 56.6 143 35.7
A10p27300 Brassica napus HOM05D000084 ORTHO05D002966 2.8e-06 56.2 142 35.2
BolC9t59486H Brassica oleracea HOM05D000084 ORTHO05D002966 2.8e-06 56.2 141 35.5
BraA10t44781Z Brassica rapa HOM05D000084 ORTHO05D002966 2.8e-06 56.2 142 35.2
QL06p049339 Quercus lobata HOM05D000084 ORTHO05D002966 2.8e-06 56.2 153 33.3
Thhalv10013327m.g Eutrema salsugineum HOM05D000084 ORTHO05D002966 8.0e-06 54.7 151 31.8


User provided reference genes

Program Settings