Gene: AT5G64960

General Information

Structural Information

  • Species Arabidopsis thaliana
  • Gene Identifier AT5G64960
  • Transcript Identifier AT5G64960.1
  • Gene Type Coding gene
  • Location Chr5 : 25955497-25958427 : positive

Gene Family Information

  • ID HOM05D000084
  • #Genes/#Species 3652/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid AT5G64960.1
  • symbol CDKC2
  • Alias CDKC%3B2,Cyclin-dependent kinase C%3B2
  • uniprot Q8W4P1

Descriptions

  • Description cyclin dependent kinase group C2
  • Computational description cyclin dependent kinase group C2 (CDKC2); FUNCTIONS IN: kinase activity; INVOLVED IN: in 6 processes; LOCATED IN: cytosol, nuclear body, nucleus, microtubule, spliceosomal complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cyclin-dependent kinase C;1 (TAIR:AT5G10270.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
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Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006468
IBA
IEA
Gene Ontologyprotein phosphorylation1
GO:0006468
IEA
InterProprotein phosphorylation
GO:0070816
IBA
Gene Ontologyphosphorylation of RNA polymerase II C-terminal domain1
GO:0051726
IEA
GOA Databaseregulation of cell cycle
GO:0032968
IBA
Gene Ontologypositive regulation of transcription elongation from RNA polymerase II promoter1
GO:0016310
IEA
GOA Databasephosphorylation
GO:0048440
IGI
Gene Ontologycarpel development2
GO:0009615
IEP
Gene Ontologyresponse to virus2
GO:0009908
IMP
Gene Ontologyflower development2
GO:0048366
IGI
Gene Ontologyleaf development2
GO:0050792
IMP
Gene Ontologyregulation of viral process2
GO:0006397
IMP, IEP
Gene OntologymRNA processing3
GO:0009414
IMP
Gene Ontologyresponse to water deprivation4

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004693
IEA
GOA Databasecyclin-dependent protein serine/threonine kinase activity
GO:0004693
IBA
Gene Ontologycyclin-dependent protein serine/threonine kinase activity1
GO:0106311
IEA
GOA Databaseprotein threonine kinase activity
GO:0106310
IEA
GOA Databaseprotein serine kinase activity
GO:0008353
IEA
GOA DatabaseRNA polymerase II CTD heptapeptide repeat kinase activity
GO:0008353
IBA
Gene OntologyRNA polymerase II CTD heptapeptide repeat kinase activity1
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0016740
IEA
GOA Databasetransferase activity
GO:0004674
IEA
GOA Databaseprotein serine/threonine kinase activity
GO:0016301
IEA
GOA Databasekinase activity
GO:0016301
IDA
Gene Ontologykinase activity2
GO:0004672
IEA
Gene Ontologyprotein kinase activity
GO:0004672
IEA
InterProprotein kinase activity
GO:0005524
IEA
Gene OntologyATP binding
GO:0005524
IEA
InterProATP binding
GO:0005515
IPI
Gene Ontologyprotein binding5

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0000307
IBA
Gene Ontologycyclin-dependent protein kinase holoenzyme complex1
GO:0005829
IDA
GOA Databasecytosol
GO:0005634
IDA
GOA Databasenucleus
GO:0005634
HDA
ISM, IBA
Gene Ontologynucleus1 6
GO:0016604
IDA
Gene Ontologynuclear body3

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR011009 Protein kinase-like domain superfamily
IPR000719 Protein kinase domain
Mapman id Description
13.1.1.2.3 Cell cycle organisation.cell cycle control.cyclin-dependent regulation.cyclin-dependent protein kinase complex.catalytic component CDKC
15.3.2.1.1 RNA biosynthesis.RNA polymerase II-dependent transcription.RNA polymerase-II phosphorylation/dephosphorylation.CTDK-I protein kinase complex.catalytic component CDKC-1/CTK1
18.4.3.1.3 Protein modification.phosphorylation.CMGC protein kinase superfamily.CDK protein kinase families.protein kinase (CDKC)