Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g08967 Brassica carinata HOM05D002484 ORTHO05D002541 5.3e-40 167.2 80 100.0
BcaB02g08968 Brassica carinata HOM05D002484 ORTHO05D002541 2.6e-39 164.9 80 98.8
BcaB02g08940 Brassica carinata HOM05D002484 ORTHO05D002541 1.3e-38 162.5 80 97.5
BcaB02g08969 Brassica carinata HOM05D002484 ORTHO05D002541 1.9e-37 158.7 80 95.0
C04p06250 Brassica napus HOM05D002484 ORTHO05D002541 1.2e-31 139.4 81 85.2
A05p05280 Brassica napus HOM05D002484 ORTHO05D002541 2.0e-31 138.7 80 83.8
C04p06270 Brassica napus HOM05D002484 ORTHO05D002541 2.6e-31 138.3 81 85.2
BcaC02g12225 Brassica carinata HOM05D002484 ORTHO05D002541 4.5e-31 137.5 81 82.7
BcaC02g12223 Brassica carinata HOM05D002484 ORTHO05D002541 1.3e-30 136.0 81 85.2
A05p05270 Brassica napus HOM05D002484 ORTHO05D002541 2.2e-30 135.2 81 84.0
A05p05350 Brassica napus HOM05D002484 ORTHO05D002541 2.9e-30 134.8 81 81.5
BraA05t19505Z Brassica rapa HOM05D002484 ORTHO05D002541 2.9e-30 134.8 81 81.5
BcaC02g12226 Brassica carinata HOM05D002484 ORTHO05D002541 5.0e-30 134.0 81 82.7
C04p06240 Brassica napus HOM05D002484 ORTHO05D002541 5.0e-30 134.0 81 82.7
BolC4t22248H Brassica oleracea HOM05D002484 ORTHO05D002541 1.4e-29 132.5 81 82.7
A06p39910 Brassica napus HOM05D002484 ORTHO05D002541 9.1e-24 113.2 81 69.1
BraA06t26906Z Brassica rapa HOM05D002484 ORTHO05D002541 9.1e-24 113.2 81 67.9
A05p05320 Brassica napus HOM05D003566 ORTHO05D003430 6.5e-22 107.1 59 79.7
A02p20260 Brassica napus HOM05D002484 ORTHO05D002541 7.7e-15 83.6 83 49.4
C02p33640 Brassica napus HOM05D002484 ORTHO05D002541 7.7e-15 83.6 83 49.4
BolC2t09340H Brassica oleracea HOM05D002484 ORTHO05D002541 7.7e-15 83.6 83 49.4
BraA02t07060Z Brassica rapa HOM05D002484 ORTHO05D002541 7.7e-15 83.6 83 49.4
A02p20250 Brassica napus HOM05D002484 ORTHO05D002541 1.0e-14 83.2 81 51.9
C02p33650 Brassica napus HOM05D002484 ORTHO05D002541 1.0e-14 83.2 81 51.9
BolC2t09339H Brassica oleracea HOM05D002484 ORTHO05D002541 1.0e-14 83.2 81 51.9
BraA02t07059Z Brassica rapa HOM05D002484 ORTHO05D002541 1.0e-14 83.2 81 51.9
CARHR069370 Cardamine hirsuta HOM05D002484 ORTHO05D002541 1.3e-14 82.8 81 48.1
A07p41390 Brassica napus HOM05D002484 ORTHO05D002541 2.2e-14 82.0 80 47.5
BraA07t31672Z Brassica rapa HOM05D002484 ORTHO05D002541 2.2e-14 82.0 80 47.5
Sp5g30950 Schrenkiella parvula HOM05D002484 ORTHO05D002541 6.5e-14 80.5 80 47.5
C06p49790 Brassica napus HOM05D002484 ORTHO05D002541 1.1e-13 79.7 81 48.1
BcaC08g45552 Brassica carinata HOM05D002484 ORTHO05D002541 1.9e-13 79.0 80 45.0
C06p32340 Brassica napus HOM05D002484 ORTHO05D002541 1.9e-13 79.0 80 45.0
Carub.0002s2273 Capsella rubella HOM05D002484 ORTHO05D002541 1.9e-13 79.0 81 46.9
BcaB05g24952 Brassica carinata HOM05D002484 ORTHO05D002541 2.5e-13 78.6 81 46.9
Sp5g30970 Schrenkiella parvula HOM05D002484 ORTHO05D002541 3.2e-13 78.2 80 45.0
Thhalv10019399m.g Eutrema salsugineum HOM05D002484 ORTHO05D002541 4.2e-13 77.8 80 46.2
BcaB05g24945 Brassica carinata HOM05D002484 ORTHO05D002541 5.5e-13 77.4 81 48.1
BcaB05g24946 Brassica carinata HOM05D002484 ORTHO05D002541 5.5e-13 77.4 81 48.1
Thhalv10019396m.g Eutrema salsugineum HOM05D002484 ORTHO05D002541 5.5e-13 77.4 81 45.7
BcaB02g07044 Brassica carinata HOM05D002484 ORTHO05D002541 7.2e-13 77.0 80 45.0
BcaC08g47321 Brassica carinata HOM05D002484 ORTHO05D002541 7.2e-13 77.0 81 46.9
A02p20270 Brassica napus HOM05D002484 ORTHO05D002541 7.2e-13 77.0 81 46.9
BraA02t07061Z Brassica rapa HOM05D002484 ORTHO05D002541 7.2e-13 77.0 81 46.9
BcaC03g15629 Brassica carinata HOM05D002484 ORTHO05D002541 1.2e-12 76.3 81 45.7
C02p33630 Brassica napus HOM05D002484 ORTHO05D002541 1.2e-12 76.3 81 45.7
BolC2t09341H Brassica oleracea HOM05D002484 ORTHO05D002541 1.2e-12 76.3 81 45.7
Carub.0002s2272 Capsella rubella HOM05D002484 ORTHO05D002541 1.6e-12 75.9 81 45.7
BcaB02g07045 Brassica carinata HOM05D002484 ORTHO05D002541 2.1e-12 75.5 81 44.4
C06p32380 Brassica napus HOM05D002484 ORTHO05D002541 3.6e-12 74.7 80 43.8
BolC6t38355H Brassica oleracea HOM05D002484 ORTHO05D002541 3.6e-12 74.7 81 45.7
Carub.0007s3201 Capsella rubella HOM05D002484 ORTHO05D002541 3.6e-12 74.7 80 42.5
BcaC03g15628 Brassica carinata HOM05D002484 ORTHO05D002541 4.7e-12 74.3 93 45.2
A07p28700 Brassica napus HOM05D002484 ORTHO05D002541 4.7e-12 74.3 81 44.4
A07p41370 Brassica napus HOM05D002484 ORTHO05D002541 4.7e-12 74.3 81 44.4
BraA07t30510Z Brassica rapa HOM05D002484 ORTHO05D002541 4.7e-12 74.3 81 44.4
BraA07t31670Z Brassica rapa HOM05D002484 ORTHO05D002541 4.7e-12 74.3 81 44.4
Carub.0002s2268 Capsella rubella HOM05D002484 ORTHO05D002541 4.7e-12 74.3 81 44.4
Carub.0002s2269 Capsella rubella HOM05D002484 ORTHO05D002541 4.7e-12 74.3 81 44.4
Thhalv10019398m.g Eutrema salsugineum HOM05D002484 ORTHO05D002541 6.1e-12 73.9 80 43.8
BcaC08g45554 Brassica carinata HOM05D002484 ORTHO05D002541 8.0e-12 73.6 80 42.5
BcaC08g45556 Brassica carinata HOM05D002484 ORTHO05D002541 8.0e-12 73.6 80 42.5
C06p32330 Brassica napus HOM05D002484 ORTHO05D002541 8.0e-12 73.6 81 44.4
Carub.0002s2271 Capsella rubella HOM05D002484 ORTHO05D002541 1.0e-11 73.2 81 44.4
CARHR069270 Cardamine hirsuta HOM05D002484 ORTHO05D002541 1.0e-11 73.2 81 45.7
AT2G26020 Arabidopsis thaliana HOM05D002484 ORTHO05D002541 1.4e-11 72.8 81 42.0
AL2G35840 Arabidopsis lyrata HOM05D002484 ORTHO05D002541 1.8e-11 72.4 81 43.2
AT2G26010 Arabidopsis thaliana HOM05D002484 ORTHO05D002541 1.8e-11 72.4 81 43.2
Carub.0002s2270 Capsella rubella HOM05D002484 ORTHO05D002541 1.8e-11 72.4 81 43.2
AT5G44430 Arabidopsis thaliana HOM05D002484 ORTHO05D002541 2.3e-11 72.0 81 43.2
CARHR069280 Cardamine hirsuta HOM05D002484 ORTHO05D002541 3.0e-11 71.6 81 42.0
Carub.0002s2274 Capsella rubella HOM05D002484 ORTHO05D002541 4.0e-11 71.2 81 42.0
CARHR069310 Cardamine hirsuta HOM05D002484 ORTHO05D002541 4.0e-11 71.2 81 43.2
CARHR284300 Cardamine hirsuta HOM05D002484 ORTHO05D002541 4.0e-11 71.2 81 42.0
Aqoxy5G01512 Aquilegia oxysepala HOM05D002484 ORTHO05D002541 5.2e-11 70.9 80 42.5
BcaC08g47074 Brassica carinata HOM05D002484 ORTHO05D002541 5.2e-11 70.9 81 40.7
Thhalv10019397m.g Eutrema salsugineum HOM05D002484 ORTHO05D002541 5.2e-11 70.9 81 44.4
AT5G44420 Arabidopsis thaliana HOM05D002484 ORTHO05D002541 8.8e-11 70.1 81 40.7
AT1G75830 Arabidopsis thaliana HOM05D002484 ORTHO05D002541 1.5e-10 69.3 81 40.7
AT1G55010 Arabidopsis thaliana HOM05D002484 ORTHO05D002541 2.6e-10 68.6 81 40.7
A07p41360 Brassica napus HOM05D002484 ORTHO05D002541 2.6e-10 68.6 81 39.5
BraA07t31669Z Brassica rapa HOM05D002484 ORTHO05D002541 2.6e-10 68.6 81 39.5
Thhalv10019395m.g Eutrema salsugineum HOM05D002484 ORTHO05D002541 2.6e-10 68.6 81 40.7
BcaB05g24949 Brassica carinata HOM05D002484 ORTHO05D002541 5.7e-10 67.4 82 43.9
Carub.0002s0817 Capsella rubella HOM05D002484 ORTHO05D002541 1.7e-09 65.9 81 43.2
C02p33860 Brassica napus HOM05D002484 ORTHO05D002541 2.2e-09 65.5 81 43.2
CARHR069250 Cardamine hirsuta HOM05D002484 ORTHO05D002541 2.2e-09 65.5 82 45.1
AL7G45400 Arabidopsis lyrata HOM05D002484 ORTHO05D002541 3.7e-09 64.7 80 40.0
Carub.0002s1189 Capsella rubella HOM05D002484 ORTHO05D002541 4.8e-09 64.3 83 39.8
Aqoxy4G00457 Aquilegia oxysepala HOM05D002484 ORTHO05D002541 8.2e-09 63.5 80 36.2
CARHR216420 Cardamine hirsuta HOM05D002484 ORTHO05D002541 8.2e-09 63.5 81 38.3
Thhalv10019394m.g Eutrema salsugineum HOM05D002484 ORTHO05D002541 8.2e-09 63.5 81 39.5
CARHR069320 Cardamine hirsuta HOM05D002484 ORTHO05D002541 1.1e-08 63.2 82 35.4
AL1G65590 Arabidopsis lyrata HOM05D002484 ORTHO05D002541 1.4e-08 62.8 81 37.0
BcaC08g45551 Brassica carinata HOM05D002484 ORTHO05D002541 1.8e-08 62.4 81 39.5
BolC2t09321H Brassica oleracea HOM05D002484 ORTHO05D002541 1.8e-08 62.4 81 39.5
Thhalv10000662m.g Eutrema salsugineum HOM05D002484 ORTHO05D002541 5.3e-08 60.8 80 36.2
A07p41400 Brassica napus HOM05D002484 ORTHO05D002541 1.2e-07 59.7 81 39.5
Thhalv10000535m.g Eutrema salsugineum HOM05D002484 ORTHO05D002541 1.2e-07 59.7 80 38.8
AL1G66200 Arabidopsis lyrata HOM05D002484 ORTHO05D002541 2.7e-07 58.5 82 40.2
CARHR069290 Cardamine hirsuta HOM05D002484 ORTHO05D002541 5.9e-07 57.4 81 42.0
COL.COLO4_25963 Corchorus olitorius HOM05D002484 ORTHO05D002541 5.9e-07 57.4 82 34.1
BcaC03g15604 Brassica carinata HOM05D002484 ORTHO05D002541 1.7e-06 55.8 87 39.1
CARHR216400 Cardamine hirsuta HOM05D002484 ORTHO05D002541 2.9e-06 55.1 83 43.4
AL2G35830 Arabidopsis lyrata HOM05D002484 ORTHO05D002541 6.5e-06 53.9 65 36.9


User provided reference genes

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