Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g08940 Brassica carinata HOM05D002484 ORTHO05D002541 6.9e-40 166.8 80 100.0
BcaB02g08968 Brassica carinata HOM05D002484 ORTHO05D002541 2.6e-39 164.9 80 98.8
BcaB02g08969 Brassica carinata HOM05D002484 ORTHO05D002541 1.0e-38 162.9 80 97.5
BcaB02g08967 Brassica carinata HOM05D002484 ORTHO05D002541 1.3e-38 162.5 80 97.5
C04p06250 Brassica napus HOM05D002484 ORTHO05D002541 6.3e-33 143.7 81 87.7
C04p06270 Brassica napus HOM05D002484 ORTHO05D002541 1.4e-32 142.5 81 87.7
A05p05280 Brassica napus HOM05D002484 ORTHO05D002541 1.8e-32 142.1 80 85.0
BcaC02g12225 Brassica carinata HOM05D002484 ORTHO05D002541 2.4e-32 141.7 81 85.2
BcaC02g12223 Brassica carinata HOM05D002484 ORTHO05D002541 6.9e-32 140.2 81 87.7
A05p05270 Brassica napus HOM05D002484 ORTHO05D002541 2.0e-31 138.7 81 85.2
A05p05350 Brassica napus HOM05D002484 ORTHO05D002541 2.6e-31 138.3 81 82.7
BraA05t19505Z Brassica rapa HOM05D002484 ORTHO05D002541 2.6e-31 138.3 81 82.7
BcaC02g12226 Brassica carinata HOM05D002484 ORTHO05D002541 4.5e-31 137.5 81 84.0
C04p06240 Brassica napus HOM05D002484 ORTHO05D002541 4.5e-31 137.5 81 84.0
BolC4t22248H Brassica oleracea HOM05D002484 ORTHO05D002541 7.7e-31 136.7 81 85.2
A06p39910 Brassica napus HOM05D002484 ORTHO05D002541 9.1e-24 113.2 81 69.1
BraA06t26906Z Brassica rapa HOM05D002484 ORTHO05D002541 9.1e-24 113.2 81 67.9
A05p05320 Brassica napus HOM05D003566 ORTHO05D003430 1.7e-22 109.0 59 79.7
A02p20260 Brassica napus HOM05D002484 ORTHO05D002541 2.6e-15 85.1 83 50.6
C02p33640 Brassica napus HOM05D002484 ORTHO05D002541 2.6e-15 85.1 83 50.6
BolC2t09340H Brassica oleracea HOM05D002484 ORTHO05D002541 2.6e-15 85.1 83 50.6
BraA02t07060Z Brassica rapa HOM05D002484 ORTHO05D002541 2.6e-15 85.1 83 50.6
A02p20250 Brassica napus HOM05D002484 ORTHO05D002541 3.5e-15 84.7 81 53.1
C02p33650 Brassica napus HOM05D002484 ORTHO05D002541 3.5e-15 84.7 81 53.1
BolC2t09339H Brassica oleracea HOM05D002484 ORTHO05D002541 3.5e-15 84.7 81 53.1
BraA02t07059Z Brassica rapa HOM05D002484 ORTHO05D002541 3.5e-15 84.7 81 53.1
CARHR069370 Cardamine hirsuta HOM05D002484 ORTHO05D002541 4.5e-15 84.3 81 49.4
A07p41390 Brassica napus HOM05D002484 ORTHO05D002541 7.7e-15 83.6 80 48.8
BraA07t31672Z Brassica rapa HOM05D002484 ORTHO05D002541 7.7e-15 83.6 80 48.8
Sp5g30950 Schrenkiella parvula HOM05D002484 ORTHO05D002541 2.2e-14 82.0 80 48.8
C06p49790 Brassica napus HOM05D002484 ORTHO05D002541 3.8e-14 81.3 81 49.4
BcaC08g45552 Brassica carinata HOM05D002484 ORTHO05D002541 6.5e-14 80.5 80 46.2
C06p32340 Brassica napus HOM05D002484 ORTHO05D002541 6.5e-14 80.5 80 46.2
Carub.0002s2273 Capsella rubella HOM05D002484 ORTHO05D002541 6.5e-14 80.5 81 48.1
BcaB05g24952 Brassica carinata HOM05D002484 ORTHO05D002541 8.5e-14 80.1 81 48.1
Sp5g30970 Schrenkiella parvula HOM05D002484 ORTHO05D002541 1.1e-13 79.7 80 46.2
Thhalv10019399m.g Eutrema salsugineum HOM05D002484 ORTHO05D002541 1.5e-13 79.3 80 47.5
BcaB05g24945 Brassica carinata HOM05D002484 ORTHO05D002541 1.9e-13 79.0 81 49.4
BcaB05g24946 Brassica carinata HOM05D002484 ORTHO05D002541 1.9e-13 79.0 81 49.4
Thhalv10019396m.g Eutrema salsugineum HOM05D002484 ORTHO05D002541 1.9e-13 79.0 81 46.9
BcaC08g47321 Brassica carinata HOM05D002484 ORTHO05D002541 2.5e-13 78.6 81 48.1
A02p20270 Brassica napus HOM05D002484 ORTHO05D002541 2.5e-13 78.6 81 48.1
BraA02t07061Z Brassica rapa HOM05D002484 ORTHO05D002541 2.5e-13 78.6 81 48.1
BcaC03g15629 Brassica carinata HOM05D002484 ORTHO05D002541 4.2e-13 77.8 81 46.9
C02p33630 Brassica napus HOM05D002484 ORTHO05D002541 4.2e-13 77.8 81 46.9
BolC2t09341H Brassica oleracea HOM05D002484 ORTHO05D002541 4.2e-13 77.8 81 46.9
Carub.0002s2272 Capsella rubella HOM05D002484 ORTHO05D002541 5.5e-13 77.4 81 46.9
BcaB02g07044 Brassica carinata HOM05D002484 ORTHO05D002541 7.2e-13 77.0 80 45.0
BcaB02g07045 Brassica carinata HOM05D002484 ORTHO05D002541 7.2e-13 77.0 81 45.7
C06p32380 Brassica napus HOM05D002484 ORTHO05D002541 1.2e-12 76.3 80 45.0
BolC6t38355H Brassica oleracea HOM05D002484 ORTHO05D002541 1.2e-12 76.3 81 46.9
Carub.0007s3201 Capsella rubella HOM05D002484 ORTHO05D002541 1.2e-12 76.3 80 43.8
BcaC03g15628 Brassica carinata HOM05D002484 ORTHO05D002541 1.6e-12 75.9 93 46.2
A07p28700 Brassica napus HOM05D002484 ORTHO05D002541 1.6e-12 75.9 81 45.7
A07p41370 Brassica napus HOM05D002484 ORTHO05D002541 1.6e-12 75.9 81 45.7
BraA07t30510Z Brassica rapa HOM05D002484 ORTHO05D002541 1.6e-12 75.9 81 45.7
BraA07t31670Z Brassica rapa HOM05D002484 ORTHO05D002541 1.6e-12 75.9 81 45.7
Carub.0002s2268 Capsella rubella HOM05D002484 ORTHO05D002541 1.6e-12 75.9 81 45.7
Carub.0002s2269 Capsella rubella HOM05D002484 ORTHO05D002541 1.6e-12 75.9 81 45.7
Thhalv10019398m.g Eutrema salsugineum HOM05D002484 ORTHO05D002541 2.1e-12 75.5 80 45.0
BcaC08g45554 Brassica carinata HOM05D002484 ORTHO05D002541 2.7e-12 75.1 80 43.8
BcaC08g45556 Brassica carinata HOM05D002484 ORTHO05D002541 2.7e-12 75.1 80 43.8
C06p32330 Brassica napus HOM05D002484 ORTHO05D002541 2.7e-12 75.1 81 45.7
Carub.0002s2271 Capsella rubella HOM05D002484 ORTHO05D002541 3.6e-12 74.7 81 45.7
CARHR069270 Cardamine hirsuta HOM05D002484 ORTHO05D002541 3.6e-12 74.7 81 46.9
AT2G26020 Arabidopsis thaliana HOM05D002484 ORTHO05D002541 4.7e-12 74.3 81 43.2
AL2G35840 Arabidopsis lyrata HOM05D002484 ORTHO05D002541 6.1e-12 73.9 81 44.4
AT2G26010 Arabidopsis thaliana HOM05D002484 ORTHO05D002541 6.1e-12 73.9 81 44.4
Carub.0002s2270 Capsella rubella HOM05D002484 ORTHO05D002541 6.1e-12 73.9 81 44.4
AT5G44430 Arabidopsis thaliana HOM05D002484 ORTHO05D002541 8.0e-12 73.6 81 44.4
Carub.0002s2274 Capsella rubella HOM05D002484 ORTHO05D002541 1.4e-11 72.8 81 43.2
CARHR069310 Cardamine hirsuta HOM05D002484 ORTHO05D002541 1.4e-11 72.8 81 44.4
CARHR284300 Cardamine hirsuta HOM05D002484 ORTHO05D002541 1.4e-11 72.8 81 43.2
BcaC08g47074 Brassica carinata HOM05D002484 ORTHO05D002541 1.8e-11 72.4 81 42.0
Thhalv10019397m.g Eutrema salsugineum HOM05D002484 ORTHO05D002541 1.8e-11 72.4 81 45.7
AT5G44420 Arabidopsis thaliana HOM05D002484 ORTHO05D002541 3.0e-11 71.6 81 42.0
Aqoxy5G01512 Aquilegia oxysepala HOM05D002484 ORTHO05D002541 5.2e-11 70.9 80 42.5
AT1G75830 Arabidopsis thaliana HOM05D002484 ORTHO05D002541 5.2e-11 70.9 81 42.0
A07p41360 Brassica napus HOM05D002484 ORTHO05D002541 8.8e-11 70.1 81 40.7
BraA07t31669Z Brassica rapa HOM05D002484 ORTHO05D002541 8.8e-11 70.1 81 40.7
CARHR069280 Cardamine hirsuta HOM05D002484 ORTHO05D002541 8.8e-11 70.1 81 42.0
Thhalv10019395m.g Eutrema salsugineum HOM05D002484 ORTHO05D002541 8.8e-11 70.1 81 42.0
BcaB05g24949 Brassica carinata HOM05D002484 ORTHO05D002541 1.5e-10 69.3 82 45.1
AT1G55010 Arabidopsis thaliana HOM05D002484 ORTHO05D002541 5.7e-10 67.4 81 40.7
C02p33860 Brassica napus HOM05D002484 ORTHO05D002541 7.5e-10 67.0 81 44.4
CARHR069250 Cardamine hirsuta HOM05D002484 ORTHO05D002541 7.5e-10 67.0 82 46.3
AL7G45400 Arabidopsis lyrata HOM05D002484 ORTHO05D002541 1.3e-09 66.2 80 41.2
Carub.0002s1189 Capsella rubella HOM05D002484 ORTHO05D002541 1.7e-09 65.9 83 41.0
CARHR216420 Cardamine hirsuta HOM05D002484 ORTHO05D002541 2.8e-09 65.1 81 39.5
Thhalv10019394m.g Eutrema salsugineum HOM05D002484 ORTHO05D002541 2.8e-09 65.1 81 40.7
Carub.0002s0817 Capsella rubella HOM05D002484 ORTHO05D002541 3.7e-09 64.7 81 43.2
CARHR069320 Cardamine hirsuta HOM05D002484 ORTHO05D002541 3.7e-09 64.7 82 36.6
BolC2t09321H Brassica oleracea HOM05D002484 ORTHO05D002541 6.3e-09 63.9 81 40.7
Aqoxy4G00457 Aquilegia oxysepala HOM05D002484 ORTHO05D002541 8.2e-09 63.5 80 36.2
BcaC08g45551 Brassica carinata HOM05D002484 ORTHO05D002541 1.4e-08 62.8 81 42.0
AL1G65590 Arabidopsis lyrata HOM05D002484 ORTHO05D002541 3.1e-08 61.6 81 37.0
A07p41400 Brassica napus HOM05D002484 ORTHO05D002541 4.1e-08 61.2 81 40.7
Thhalv10000535m.g Eutrema salsugineum HOM05D002484 ORTHO05D002541 5.3e-08 60.8 80 40.0
Thhalv10000662m.g Eutrema salsugineum HOM05D002484 ORTHO05D002541 5.3e-08 60.8 80 36.2
AL1G66200 Arabidopsis lyrata HOM05D002484 ORTHO05D002541 9.1e-08 60.1 82 41.5
CARHR069290 Cardamine hirsuta HOM05D002484 ORTHO05D002541 1.6e-07 59.3 81 43.2
BcaC03g15604 Brassica carinata HOM05D002484 ORTHO05D002541 5.9e-07 57.4 87 40.2
CARHR216400 Cardamine hirsuta HOM05D002484 ORTHO05D002541 7.7e-07 57.0 83 44.6
COL.COLO4_25963 Corchorus olitorius HOM05D002484 ORTHO05D002541 1.7e-06 55.8 82 34.1
AL2G35830 Arabidopsis lyrata HOM05D002484 ORTHO05D002541 5.0e-06 54.3 65 36.9


User provided reference genes

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