Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g08862 Brassica carinata HOM05D006605 ORTHO05D008277 1.6e-67 260.0 218 100.0
A05p05030 Brassica napus HOM05D006605 ORTHO05D008277 1.2e-62 243.8 218 96.3
BraA05t19477Z Brassica rapa HOM05D006605 ORTHO05D008277 4.6e-62 241.9 219 96.3
Sp4g26990 Schrenkiella parvula HOM05D006605 ORTHO05D008277 6.9e-58 228.0 224 92.4
BcaC02g12262 Brassica carinata HOM05D006605 ORTHO05D008277 8.4e-56 221.1 222 90.1
C04p05870 Brassica napus HOM05D006605 ORTHO05D008277 8.4e-56 221.1 222 90.1
BolC4t22217H Brassica oleracea HOM05D006605 ORTHO05D008277 8.4e-56 221.1 222 90.1
Carub.0004s2751 Capsella rubella HOM05D006605 ORTHO05D008277 2.3e-53 213.0 226 90.7
AL4G44020 Arabidopsis lyrata HOM05D006605 ORTHO05D008277 1.8e-50 203.4 228 90.8
CARHR140160 Cardamine hirsuta HOM05D006605 ORTHO05D008277 1.8e-50 203.4 223 83.4
AT2G44920 Arabidopsis thaliana HOM05D006605 ORTHO05D008277 1.2e-49 200.7 225 82.7
Thhalv10001625m.g Eutrema salsugineum HOM05D006605 ORTHO05D008277 5.0e-40 168.7 186 93.0
THA.LOC104810044 Tarenaya hassleriana HOM05D006605 ORTHO05D008277 8.2e-35 151.4 220 66.4
Aa31LG1G26470 Aethionema arabicum HOM05D006605 ORTHO05D008277 3.1e-34 149.4 211 73.0
CiPaw.02G186200 Carya illinoinensis HOM05D006605 ORTHO05D008277 2.2e-32 143.3 225 65.3
QL08p061156 Quercus lobata HOM05D006605 ORTHO05D008277 1.1e-31 141.0 218 63.8
Duzib106G0051 Durio zibethinus HOM05D006605 ORTHO05D008277 4.2e-31 139.0 224 63.4
Medtr3g068150 Medicago truncatula HOM05D006605 ORTHO05D008277 1.6e-30 137.1 225 60.9
Gorai.011G267900 Gossypium raimondii HOM05D006605 ORTHO05D008277 7.9e-30 134.8 227 62.6
Gohir.D10G234300 Gossypium hirsutum HOM05D006605 ORTHO05D008277 1.0e-29 134.4 227 62.1
TPR.G2861 Trifolium pratense HOM05D006605 ORTHO05D008277 3.0e-29 132.9 220 63.2
arahy.Tifrunner.gnm1.ann1.SDQ61V Arachis hypogaea HOM05D006605 ORTHO05D008277 3.9e-29 132.5 219 61.6
Prupe.2G239300 Prunus persica HOM05D006605 ORTHO05D008277 5.1e-29 132.1 226 60.6
Ca_08185_v3 Cicer arietinum L. HOM05D006605 ORTHO05D008277 8.8e-29 131.3 215 61.9
Thecc.10G038800 Theobroma cacao HOM05D006605 ORTHO05D008277 1.1e-28 131.0 224 62.5
Gohir.A10G222000 Gossypium hirsutum HOM05D006605 ORTHO05D008277 1.5e-28 130.6 227 61.2
Actinidia02925 Actinidia chinensis HOM05D006605 ORTHO05D008277 2.6e-28 129.8 222 61.7
arahy.Tifrunner.gnm1.ann1.SV7RC5 Arachis hypogaea HOM05D006605 ORTHO05D008277 3.3e-28 129.4 222 62.2
EL10Ac2g04706 Beta vulgaris HOM05D006605 ORTHO05D008277 4.4e-28 129.0 216 63.0
COL.COLO4_25481 Corchorus olitorius HOM05D006605 ORTHO05D008277 4.4e-28 129.0 224 59.4
Sed0013536 Sechium edule HOM05D006605 ORTHO05D008277 4.4e-28 129.0 179 69.8
Hund13792 Selenicereus undatus HOM05D006605 ORTHO05D008277 1.3e-27 127.5 206 67.0
MELO3C008233.2 Cucumis melo HOM05D006605 ORTHO05D008277 2.8e-27 126.3 207 63.8
Rhsim03G0134500 Rhododendron simsii HOM05D006605 ORTHO05D008277 6.3e-27 125.2 223 64.1
Migut.F00754 Erythranthe guttata HOM05D006605 ORTHO05D008277 8.2e-27 124.8 183 66.1
MBI05_g35187_MAGBIO Magnolia biondii HOM05D006605 ORTHO05D008277 1.1e-26 124.4 179 70.9
Manes.07G118800 Manihot esculenta HOM05D006605 ORTHO05D008277 1.1e-26 124.4 218 63.8
ClCG11G006700 Citrullus lanatus HOM05D006605 ORTHO05D008277 1.4e-26 124.0 195 63.1
Lalb_Chr18g0053081 Lupinus albus HOM05D006605 ORTHO05D008277 1.8e-26 123.6 174 70.1
MD07G1203100 Malus domestica HOM05D006605 ORTHO05D008277 1.8e-26 123.6 229 60.7
VMungo1383G1515 Vigna mungo HOM05D006605 ORTHO05D008277 1.8e-26 123.6 223 60.5
Glyma.11G222100 Glycine max HOM05D006605 ORTHO05D008277 2.4e-26 123.2 226 60.2
Glyma.18G035300 Glycine max HOM05D006605 ORTHO05D008277 2.4e-26 123.2 225 60.4
Eucgr.G02956 Eucalyptus grandis HOM05D006605 ORTHO05D008277 3.1e-26 122.9 180 66.7
Potri.010G200000 Populus trichocarpa HOM05D006605 ORTHO05D008277 5.3e-26 122.1 221 62.0
Cc02_g07470 Coffea canephora HOM05D006605 ORTHO05D008277 1.2e-25 120.9 171 71.3
Peaxi162Scf00736g00213 Petunia axillaris HOM05D006605 ORTHO05D008277 1.2e-25 120.9 171 71.9
TWI15G0193 Tripterygium wilfordii HOM05D006605 ORTHO05D008277 1.5e-25 120.6 220 60.9
MSTRG.27369 Avicennia marina HOM05D006605 ORTHO05D008277 2.6e-25 119.8 210 64.8
Phvul.001G235600 Phaseolus vulgaris HOM05D006605 ORTHO05D008277 2.6e-25 119.8 228 57.9
DCAR_011727 Daucus carota HOM05D006605 ORTHO05D008277 4.5e-25 119.0 221 57.0
Sc14g0004650 Simmondsia chinensis HOM05D006605 ORTHO05D008277 7.7e-25 118.2 168 67.3
Potri.008G058800 Populus trichocarpa HOM05D006605 ORTHO05D008277 1.3e-24 117.5 209 58.9
Sopen06g032890 Solanum pennellii HOM05D006605 ORTHO05D008277 1.3e-24 117.5 219 59.4
GSVIVG01016495001 Vitis vinifera HOM05D006605 ORTHO05D008277 1.7e-24 117.1 166 71.7
Nitab4.5_0000120g0080 Nicotiana tabacum HOM05D006605 ORTHO05D008277 2.2e-24 116.7 172 67.4
PGSC0003DMG400034939 Solanum tuberosum HOM05D006605 ORTHO05D008277 2.2e-24 116.7 221 59.3
Aqoxy2G02333 Aquilegia oxysepala HOM05D006605 ORTHO05D008277 2.9e-24 116.3 160 73.1
CsaV3_6G001320 Cucumis sativus L. HOM05D006605 ORTHO05D008277 3.8e-24 115.9 221 59.7
Nitab4.5_0002872g0060 Nicotiana tabacum HOM05D006605 ORTHO05D008277 3.8e-24 115.9 172 62.8
PGR142G0607 Punica granatum HOM05D006605 ORTHO05D008277 6.5e-24 115.2 218 59.6
CANSAT56G0196 Cannabis sativa HOM05D006605 ORTHO05D008277 8.5e-24 114.8 171 69.6
Os01g0144100 Oryza sativa ssp. japonica HOM05D006605 ORTHO05D008277 1.1e-23 114.4 171 69.0
Lj6g0021847 Lotus japonicus HOM05D006605 ORTHO05D008277 2.5e-23 113.2 226 60.6
TAR636G1277 Trochodendron aralioides HOM05D006605 ORTHO05D008277 4.2e-23 112.5 182 67.6
RcHm_v2.0_Chr1g0368241 Rosa chinensis HOM05D006605 ORTHO05D008277 9.4e-23 111.3 174 65.5
CAN.G394.84 Capsicum annuum HOM05D006605 ORTHO05D008277 1.2e-22 110.9 219 59.8
Dinv03376 Davidia involucrata HOM05D006605 ORTHO05D008277 1.2e-22 110.9 180 66.1
ECA233G2444 Erigeron canadensis HOM05D006605 ORTHO05D008277 1.2e-22 110.9 165 68.5
Hma1.2p1_0039F.1_g024420 Hydrangea macrophylla HOM05D006605 ORTHO05D008277 2.1e-22 110.2 177 64.4
PSO513G0127 Papaver somniferum HOM05D006605 ORTHO05D008277 2.7e-22 109.8 169 72.2
Lsat_1_v5_gn_8_14921 Lactuca sativa HOM05D006605 ORTHO05D008277 3.6e-22 109.4 220 59.5
Hund16063 Selenicereus undatus HOM05D006605 ORTHO05D008277 4.7e-22 109.0 230 51.3
ATR0559G079 Amborella trichopoda HOM05D006605 ORTHO05D008277 6.1e-22 108.6 170 70.6
unitig_747.g21792 Utricularia gibba HOM05D006605 ORTHO05D008277 6.1e-22 108.6 187 61.5
FAN03G2768 Fragaria x ananassa HOM05D006605 ORTHO05D008277 1.4e-21 107.5 244 53.3
PSO339G4488 Papaver somniferum HOM05D006605 ORTHO05D008277 1.8e-21 107.1 169 71.6
FAN01G2186 Fragaria x ananassa HOM05D006605 ORTHO05D008277 3.0e-21 106.3 174 63.2
FAN06G4444 Fragaria x ananassa HOM05D006605 ORTHO05D008277 3.0e-21 106.3 174 63.2
HanXRQChr08g0221071 Helianthus annuus HOM05D006605 ORTHO05D008277 1.1e-20 104.4 166 68.7
FAN06G3081 Fragaria x ananassa HOM05D006605 ORTHO05D008277 1.5e-20 104.0 174 62.6
Oeu001504.1 Olea europaea HOM05D006605 ORTHO05D008277 1.5e-20 104.0 172 66.3
CDE09G0303 Ceratophyllum demersum HOM05D006605 ORTHO05D008277 4.4e-20 102.4 169 74.0
FvH4_7g23000 Fragaria vesca HOM05D006605 ORTHO05D008277 2.2e-19 100.1 174 62.6
HPP92_019456 Vanilla planifolia HOM05D006605 ORTHO05D008277 4.8e-19 99.0 170 64.7
AagrBONN_evm.TU.Sc2ySwM_117.3127 Anthoceros agrestis HOM05D006605 ORTHO05D008277 3.1e-18 96.3 215 53.0
Haze_17112 Corylus avellana HOM05D006605 ORTHO05D008277 3.1e-18 96.3 173 65.9
Ah.16g102590 Amaranthus hybridus HOM05D006605 ORTHO05D008277 2.0e-17 93.6 208 57.7
AUR62012132 Chenopodium quinoa HOM05D006605 ORTHO05D008277 3.5e-17 92.8 172 67.4
SMO364G0932 Selaginella moellendorffii HOM05D006605 ORTHO05D008277 1.0e-16 91.3 170 64.7
Zm00001eb335810 Zea mays HOM05D006605 ORTHO05D008277 1.3e-16 90.9 159 82.4
Mapoly0057s0063 Marchantia polymorpha HOM05D006605 ORTHO05D008277 2.2e-16 90.1 164 57.3
Ciclev10032666m.g Citrus clementina HOM05D006605 ORTHO05D008277 1.1e-15 87.8 77 63.6
Nn2g13462 Nelumbo nucifera HOM05D006605 ORTHO05D008277 1.1e-15 87.8 144 71.5
Dinv03373 Davidia involucrata HOM05D006605 ORTHO05D008277 1.9e-15 87.0 108 54.6
Dinv06757 Davidia involucrata HOM05D006605 ORTHO05D008277 1.9e-15 87.0 108 54.6
Psat5g124720 Pisum sativum HOM05D006605 ORTHO05D008277 3.2e-15 86.3 103 56.3
Cpa.g.sc19.283 Carica papaya HOM05D006605 ORTHO05D008277 5.5e-15 85.5 142 71.1
Pp3c11_10480 Physcomitrium patens HOM05D006605 ORTHO05D008277 5.5e-15 85.5 170 55.3
CSS0025701 Camellia sinensis var. sinensis HOM05D006605 ORTHO05D008277 4.7e-14 82.4 103 55.3
FAN01G0046 Fragaria x ananassa HOM05D006605 ORTHO05D008277 4.7e-14 82.4 157 62.4
Lj8C79T16 Lonicera japonica HOM05D006605 ORTHO05D008277 2.3e-13 80.1 79 60.8
SGA_v2.0_scaffold389G50578 Striga asiatica HOM05D006605 ORTHO05D008277 1.2e-12 77.8 220 65.5
vmacro07051 Vaccinium macrocarpon HOM05D006605 ORTHO05D008277 1.5e-12 77.4 38 92.1
Sabra10G0154200 Salix brachista HOM05D006605 ORTHO05D008277 3.3e-12 76.3 102 52.0
Hma1.2p1_0039F.1_g024430 Hydrangea macrophylla HOM05D006605 ORTHO05D008277 4.4e-12 75.9 59 66.1
CBR_g37590 Chara braunii HOM05D006605 ORTHO05D008277 7.5e-12 75.1 147 65.3
SEGI_08946 Sequoiadendron giganteum HOM05D006605 ORTHO05D008277 2.8e-11 73.2 36 88.9
Cc01_g04360 Coffea canephora HOM05D006605 ORTHO05D008277 1.8e-10 70.5 51 72.5
SEGI_09593 Sequoiadendron giganteum HOM05D006605 ORTHO05D008277 1.6e-09 67.4 93 46.2
Dinv06756 Davidia involucrata HOM05D006605 ORTHO05D008277 1.0e-08 64.7 30 96.7
Oeu031356.1 Olea europaea HOM05D006605 ORTHO05D008277 4.2e-07 59.3 37 70.3


User provided reference genes

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