Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g07151 Brassica carinata HOM05D002704 ORTHO05D002891 2.0e-95 352.4 176 100.0
BcaB02g07152 Brassica carinata HOM05D002704 ORTHO05D002891 1.8e-93 345.9 174 98.9
A07p27670 Brassica napus HOM05D002704 ORTHO05D002891 5.0e-59 231.5 173 72.8
BraA07t30408Z Brassica rapa HOM05D002704 ORTHO05D002891 1.4e-53 213.4 173 69.4
Sp5g33290 Schrenkiella parvula HOM05D002704 ORTHO05D002891 3.5e-52 208.8 170 68.2
Thhalv10019097m.g Eutrema salsugineum HOM05D002704 ORTHO05D002891 3.6e-49 198.7 173 63.0
BcaB05g25124 Brassica carinata HOM05D002704 ORTHO05D002891 4.9e-46 188.3 171 62.6
BcaC08g45431 Brassica carinata HOM05D002704 ORTHO05D002891 9.2e-45 184.1 192 57.8
C06p30640 Brassica napus HOM05D002704 ORTHO05D002891 9.2e-45 184.1 192 57.8
BolC6t38228H Brassica oleracea HOM05D002704 ORTHO05D002891 9.2e-45 184.1 192 57.8
AL2G38480 Arabidopsis lyrata HOM05D002704 ORTHO05D002891 6.0e-44 181.4 172 62.8
AT1G78170 Arabidopsis thaliana HOM05D002704 ORTHO05D002891 6.0e-44 181.4 174 61.5
BcaC08g47392 Brassica carinata HOM05D002704 ORTHO05D002891 1.3e-43 180.3 171 58.5
C06p52120 Brassica napus HOM05D002704 ORTHO05D002891 1.3e-43 180.3 171 58.5
BolC6t40235H Brassica oleracea HOM05D002704 ORTHO05D002891 1.3e-43 180.3 171 58.5
CARHR071630 Cardamine hirsuta HOM05D002704 ORTHO05D002891 3.0e-43 179.1 171 62.0
BraA02t07210Z Brassica rapa HOM05D002704 ORTHO05D002891 1.9e-42 176.4 174 58.0
BcaB03g15984 Brassica carinata HOM05D002704 ORTHO05D002891 2.5e-42 176.0 175 57.1
BolC2t09563H Brassica oleracea HOM05D002704 ORTHO05D002891 4.1e-37 158.7 170 55.3
A02p22080 Brassica napus HOM05D002704 ORTHO05D002891 1.2e-36 157.1 177 53.7
Carub.0002s2506 Capsella rubella HOM05D002704 ORTHO05D002891 4.3e-34 148.7 169 55.0
A07p43470 Brassica napus HOM05D002704 ORTHO05D002891 3.9e-27 125.6 128 53.1
BraA07t31860Z Brassica rapa HOM05D002704 ORTHO05D002891 3.9e-27 125.6 128 53.1
THA.LOC104809714 Tarenaya hassleriana HOM05D002704 ORTHO05D002891 8.1e-25 117.9 171 43.9
Aa31LG4G8210 Aethionema arabicum HOM05D002704 ORTHO05D002891 2.8e-17 92.8 161 43.5
THA.LOC104800151 Tarenaya hassleriana HOM05D002704 ORTHO05D002891 4.8e-17 92.0 173 42.2
Aa31LG7G6190 Aethionema arabicum HOM05D002704 ORTHO05D002891 5.3e-16 88.6 138 44.2
A01p24680 Brassica napus HOM05D002704 ORTHO05D002891 4.2e-13 79.0 63 66.7
BraA01t02380Z Brassica rapa HOM05D002704 ORTHO05D002891 4.2e-13 79.0 63 66.7
Gohir.A05G226700 Gossypium hirsutum HOM05D002704 ORTHO05D002891 4.5e-07 58.9 131 37.4
Gorai.009G237500 Gossypium raimondii HOM05D002704 ORTHO05D002891 4.5e-07 58.9 112 41.1
Dinv44770 Davidia involucrata HOM05D002704 ORTHO05D002891 9.9e-07 57.8 112 40.2
Gohir.D05G229400 Gossypium hirsutum HOM05D002704 ORTHO05D002891 9.9e-07 57.8 112 40.2
Thhalv10008815m.g Eutrema salsugineum HOM05D002704 ORTHO05D002891 2.9e-06 56.2 166 31.3
Duzib093G0662 Durio zibethinus HOM05D002704 ORTHO05D002891 4.9e-06 55.5 134 35.1
Dinv14325 Davidia involucrata HOM05D002704 ORTHO05D002891 6.4e-06 55.1 151 35.8


User provided reference genes

Program Settings