Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g06898 Brassica carinata HOM05D000179 ORTHO05D000107 1.5e-179 632.9 346 100.0
BcaB02g06899 Brassica carinata HOM05D000179 ORTHO05D000107 9.1e-105 384.4 347 66.6
BcaB07g32855 Brassica carinata HOM05D000179 ORTHO05D000107 5.9e-104 381.7 346 70.2
BcaB07g32850 Brassica carinata HOM05D000179 ORTHO05D000107 2.8e-90 336.3 348 61.2
C05p31260 Brassica napus HOM05D000179 ORTHO05D024334 1.9e-62 243.8 363 49.6
BcaC05g27218 Brassica carinata HOM05D000179 ORTHO05D024334 2.1e-61 240.4 348 50.3
BolC5t31851H Brassica oleracea HOM05D000179 ORTHO05D024334 2.1e-61 240.4 348 50.3
C08p45600 Brassica napus HOM05D000179 ORTHO05D000107 5.6e-54 215.7 353 43.1
BcaB08g34406 Brassica carinata HOM05D000179 ORTHO05D000107 7.3e-54 215.3 355 43.1
BcaC07g41561 Brassica carinata HOM05D000179 ORTHO05D000107 4.7e-53 212.6 351 42.2
BolC8t52113H Brassica oleracea HOM05D000179 ORTHO05D000107 4.7e-53 212.6 351 42.2
A09p62020 Brassica napus HOM05D000179 ORTHO05D000107 5.3e-52 209.1 351 42.2
BraA09t41565Z Brassica rapa HOM05D000179 ORTHO05D000107 5.3e-52 209.1 351 42.5
Sp1g12930 Schrenkiella parvula HOM05D000179 ORTHO05D000107 6.9e-52 208.8 342 43.9
A09p34300 Brassica napus HOM05D000179 ORTHO05D024334 4.2e-49 199.5 350 44.0
Thhalv10007538m.g Eutrema salsugineum HOM05D000179 ORTHO05D000107 3.5e-48 196.4 356 40.7
C08p16780 Brassica napus HOM05D002557 ORTHO05D002563 5.6e-46 189.1 351 40.2
BolC8t49299H Brassica oleracea HOM05D000179 ORTHO05D000107 5.6e-46 189.1 351 40.2
BcaB03g13092 Brassica carinata HOM05D000179 ORTHO05D000107 9.6e-46 188.3 352 40.9
BraA08t35114Z Brassica rapa HOM05D002557 ORTHO05D002563 1.3e-45 188.0 351 39.9
AL1G26550 Arabidopsis lyrata HOM05D000179 ORTHO05D000107 1.6e-45 187.6 353 41.1
BcaC07g38747 Brassica carinata HOM05D000179 ORTHO05D000107 1.6e-45 187.6 351 39.9
A08p31920 Brassica napus HOM05D002557 ORTHO05D002563 1.6e-45 187.6 351 39.9
BraA09t38976Z Brassica rapa HOM05D000179 ORTHO05D024334 2.8e-45 186.8 356 42.7
CARHR015080 Cardamine hirsuta HOM05D000179 ORTHO05D000107 1.1e-44 184.9 355 40.0
AT1G14580 Arabidopsis thaliana HOM05D000179 ORTHO05D000107 2.6e-43 180.3 353 40.8
BcaB02g06518 Brassica carinata HOM05D000179 ORTHO05D000107 1.0e-39 168.3 345 38.6
BcaNung05659 Brassica carinata HOM05D000179 ORTHO05D000107 9.6e-38 161.8 285 40.4
Carub.0001s1434 Capsella rubella HOM05D000179 ORTHO05D000107 2.8e-37 160.2 357 38.1
BcaB02g06525 Brassica carinata HOM05D000179 ORTHO05D000107 3.7e-37 159.8 345 37.4
BcaB03g16360 Brassica carinata HOM05D000179 ORTHO05D000107 3.7e-37 159.8 344 38.1
C05p12490 Brassica napus HOM05D000179 ORTHO05D041569 4.8e-37 159.5 346 37.3
BcaB06g28761 Brassica carinata HOM05D000179 ORTHO05D000107 1.4e-36 157.9 345 37.4
BcaC05g25367 Brassica carinata HOM05D000179 ORTHO05D000107 2.4e-36 157.1 346 37.0
BcaC05g25368 Brassica carinata HOM05D000179 ORTHO05D000107 3.1e-36 156.8 347 37.5
C05p12540 Brassica napus HOM05D000179 ORTHO05D023859 4.0e-36 156.4 346 37.9
BcaB02g06520 Brassica carinata HOM05D000179 ORTHO05D000107 5.3e-36 156.0 345 36.5
BcaB02g06522 Brassica carinata HOM05D000179 ORTHO05D023859 9.0e-36 155.2 345 36.2
A06p10620 Brassica napus HOM05D000179 ORTHO05D023859 3.4e-35 153.3 347 36.6
BraA06t24242Z Brassica rapa HOM05D000179 ORTHO05D000107 3.4e-35 153.3 347 36.6
BolC5t29998H Brassica oleracea HOM05D000179 ORTHO05D041569 4.5e-35 152.9 346 37.3
BcaB02g06519 Brassica carinata HOM05D000179 ORTHO05D000107 8.4e-34 148.7 344 35.5
BcaB02g06526 Brassica carinata HOM05D000179 ORTHO05D000107 4.6e-32 142.9 344 34.3
BcaB02g06527 Brassica carinata HOM05D000179 ORTHO05D000107 5.1e-31 139.4 342 34.5
BcaC05g25369 Brassica carinata HOM05D000179 ORTHO05D000107 1.5e-30 137.9 280 37.9
BcaC05g25370 Brassica carinata HOM05D000179 ORTHO05D000107 1.5e-30 137.9 280 37.9
BcaC07g38748 Brassica carinata HOM05D000179 ORTHO05D000107 2.1e-29 134.0 285 36.8
BolC5t29996H Brassica oleracea HOM05D000179 ORTHO05D000107 7.6e-27 125.6 346 32.7
A06p10640 Brassica napus HOM05D000179 ORTHO05D000107 1.0e-26 125.2 347 32.6
BraA06t24244Z Brassica rapa HOM05D000179 ORTHO05D000107 1.0e-26 125.2 347 32.6
Thhalv10004022m.g Eutrema salsugineum HOM05D000179 ORTHO05D000107 4.1e-20 103.2 311 33.4
BcaB02g06524 Brassica carinata HOM05D000179 ORTHO05D000107 2.6e-19 100.5 143 47.6
BraA09t37980Z Brassica rapa HOM05D000179 ORTHO05D000107 4.5e-19 99.8 324 34.0
Carub.0005s0111 Capsella rubella HOM05D000179 ORTHO05D000107 1.3e-18 98.2 332 33.4
A09p23780 Brassica napus HOM05D000179 ORTHO05D000107 1.7e-18 97.8 324 33.6
AL5G11310 Arabidopsis lyrata HOM05D000179 ORTHO05D000107 3.8e-18 96.7 328 32.3
AT2G02080 Arabidopsis thaliana HOM05D000179 ORTHO05D000107 1.4e-17 94.7 329 32.2
Sp2g13500 Schrenkiella parvula HOM05D000179 ORTHO05D000107 1.6e-16 91.3 364 32.1
CARHR288910 Cardamine hirsuta HOM05D000179 ORTHO05D000107 3.9e-15 86.7 323 31.0
C09p30640 Brassica napus HOM05D000179 ORTHO05D000107 6.7e-15 85.9 315 31.7
BcaB07g30713 Brassica carinata HOM05D000179 ORTHO05D000107 8.8e-15 85.5 349 31.2
BcaB07g30714 Brassica carinata HOM05D000179 ORTHO05D000107 8.8e-15 85.5 349 31.2
BcaC04g21533 Brassica carinata HOM05D000179 ORTHO05D000107 1.1e-14 85.1 315 31.7
BolC9t55927H Brassica oleracea HOM05D000179 ORTHO05D000107 5.7e-14 82.8 315 31.4
BcaC06g34080 Brassica carinata HOM05D000179 ORTHO05D000107 3.7e-13 80.1 296 32.1
BolC7t43806H Brassica oleracea HOM05D000179 ORTHO05D000107 3.7e-13 80.1 296 32.1
C07p32910 Brassica napus HOM05D000179 ORTHO05D000107 4.8e-13 79.7 296 32.1
BcaB02g06523 Brassica carinata HOM05D000179 ORTHO05D023859 1.1e-12 78.6 138 37.7
A06p43810 Brassica napus HOM05D000179 ORTHO05D000107 1.4e-12 78.2 294 32.0
BraA06t27259Z Brassica rapa HOM05D000179 ORTHO05D000107 1.4e-12 78.2 294 32.0
C05p12530 Brassica napus HOM05D000179 ORTHO05D023859 3.1e-12 77.0 84 51.2
BcaB02g06521 Brassica carinata HOM05D000179 ORTHO05D000107 6.9e-12 75.9 131 42.7
THA.LOC104805117 Tarenaya hassleriana HOM05D000179 ORTHO05D000107 5.0e-10 69.7 375 29.1
THA.LOC104801767 Tarenaya hassleriana HOM05D000179 ORTHO05D000107 1.2e-08 65.1 306 31.0
BcaC06g31250 Brassica carinata HOM05D000179 ORTHO05D000107 3.0e-07 60.5 326 31.0
Aa31LG2G7860 Aethionema arabicum HOM05D000179 ORTHO05D000107 3.9e-07 60.1 353 27.2
CARHR058780 Cardamine hirsuta HOM05D000179 ORTHO05D034035 2.0e-06 57.8 110 38.2


User provided reference genes

Program Settings