Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g06876 Brassica carinata HOM05D000003 ORTHO05D009772 3.2e-69 265.0 138 100.0
BcaC03g15572 Brassica carinata HOM05D000003 ORTHO05D009772 6.3e-25 117.9 92 59.8
BcaB07g32374 Brassica carinata HOM05D000003 ORTHO05D009772 1.2e-23 113.6 126 50.8
C08p15950 Brassica napus HOM05D000003 ORTHO05D009772 1.2e-23 113.6 92 56.5
BolC6t38377H Brassica oleracea HOM05D000003 ORTHO05D009772 2.0e-23 112.8 115 49.6
BraA01t02856Z Brassica rapa HOM05D000003 ORTHO05D009772 4.6e-23 111.7 101 57.4
BcaC01g02466 Brassica carinata HOM05D000003 ORTHO05D009772 3.3e-21 105.5 122 46.7
BolC7t43567H Brassica oleracea HOM05D000003 ORTHO05D009772 3.3e-21 105.5 106 52.8
BcaC06g34333 Brassica carinata HOM05D000003 ORTHO05D009772 7.3e-21 104.4 84 61.9
BcaC03g15462 Brassica carinata HOM05D000003 ORTHO05D009772 1.6e-20 103.2 142 40.1
C02p17900 Brassica napus HOM05D000003 ORTHO05D009772 2.1e-20 102.8 116 48.3
BolC2t07921H Brassica oleracea HOM05D000003 ORTHO05D009772 2.1e-20 102.8 116 48.3
BcaC07g42246 Brassica carinata HOM05D014135 ORTHO05D016458 1.0e-19 100.5 101 49.5
BcaNung00257 Brassica carinata HOM05D000003 ORTHO05D021580 1.2e-18 97.1 112 45.5
BcaB08g35992 Brassica carinata HOM05D000003 ORTHO05D009772 7.0e-16 87.8 122 35.2
BcaC04g20002 Brassica carinata HOM05D000003 ORTHO05D009772 7.0e-16 87.8 122 35.2
BcaB02g10745 Brassica carinata HOM05D000003 ORTHO05D009772 2.3e-14 82.8 122 36.1
Aa31LG2G17780 Aethionema arabicum HOM05D000003 ORTHO05D009772 3.0e-14 82.4 104 41.3
Aa31sc17G250 Aethionema arabicum HOM05D000003 ORTHO05D009772 3.0e-14 82.4 104 41.3
C02p14790 Brassica napus HOM05D000003 ORTHO05D009772 3.9e-14 82.0 119 35.3
BolC2t07608H Brassica oleracea HOM05D000003 ORTHO05D009772 3.9e-14 82.0 119 35.3
Aa31LG2G15460 Aethionema arabicum HOM05D000003 ORTHO05D000411 8.6e-14 80.9 105 39.0
BcaB01g02217 Brassica carinata HOM05D000003 ORTHO05D009772 1.5e-13 80.1 73 52.1
BcaB07g33905 Brassica carinata HOM05D014135 ORTHO05D016458 1.5e-13 80.1 84 42.9
Aa31LG1G1440 Aethionema arabicum HOM05D000003 ORTHO05D009772 3.3e-13 79.0 111 36.0
BcaC08g46521 Brassica carinata HOM05D000003 ORTHO05D009772 3.3e-13 79.0 67 55.2
Aa31LG7G3330 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.3e-13 78.6 101 39.6
C02p54310 Brassica napus HOM05D000003 ORTHO05D009772 4.3e-13 78.6 79 48.1
C07p06100 Brassica napus HOM05D000003 ORTHO05D000004 7.3e-13 77.8 105 39.0
Aa31LG8G11510 Aethionema arabicum HOM05D000003 ORTHO05D000004 9.5e-13 77.4 94 40.4
Aa31LG7G12700 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.6e-12 76.6 104 37.5
BcaB04g18525 Brassica carinata HOM05D000003 ORTHO05D009772 2.1e-12 76.3 89 42.7
BcaB04g18526 Brassica carinata HOM05D000003 ORTHO05D009772 2.1e-12 76.3 89 42.7
BolC7t41023H Brassica oleracea HOM05D000003 ORTHO05D000004 2.8e-12 75.9 105 37.1
Aa31sc77G40 Aethionema arabicum HOM05D000003 ORTHO05D009772 3.6e-12 75.5 129 34.9
BolC7t44732H Brassica oleracea HOM05D000003 ORTHO05D009772 4.7e-12 75.1 87 40.2
AL8G21850 Arabidopsis lyrata HOM05D000328 ORTHO05D000191 6.2e-12 74.7 88 43.2
Aa31csc275G20 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.1e-11 73.9 94 38.3
C09p19850 Brassica napus HOM05D000003 ORTHO05D009772 1.1e-11 73.9 75 48.0
Aa31LG6G11540 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.4e-11 73.6 84 44.0
Aa31sc118G40 Aethionema arabicum HOM05D000003 ORTHO05D009772 1.4e-11 73.6 110 34.5
Aa31sc360G50 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.8e-11 73.2 97 41.2
Aa31sc200G60 Aethionema arabicum HOM05D000003 ORTHO05D009772 3.1e-11 72.4 127 33.9
AL2G12670 Arabidopsis lyrata HOM05D000003 ORTHO05D009772 3.1e-11 72.4 87 44.8
Aa31sc314G40 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.0e-11 72.0 114 37.7
BolC3t16094H Brassica oleracea HOM05D000003 ORTHO05D016458 4.0e-11 72.0 108 35.2
Aa31LG10G9400 Aethionema arabicum HOM05D000003 ORTHO05D000004 5.2e-11 71.6 106 35.8
Aa31LG4G11770 Aethionema arabicum HOM05D000003 ORTHO05D009772 5.2e-11 71.6 93 40.9
Sp7g09380 Schrenkiella parvula HOM05D000003 ORTHO05D009772 5.2e-11 71.6 94 38.3
C05p29390 Brassica napus HOM05D000003 ORTHO05D009772 6.8e-11 71.2 72 48.6
BolC3t16279H Brassica oleracea HOM05D000003 ORTHO05D009772 6.8e-11 71.2 68 48.5
BolC5t31671H Brassica oleracea HOM05D000003 ORTHO05D009772 6.8e-11 71.2 72 48.6
BolC9t54890H Brassica oleracea HOM05D000003 ORTHO05D009772 6.8e-11 71.2 73 47.9
BolC9t57066H Brassica oleracea HOM05D000003 ORTHO05D009772 6.8e-11 71.2 79 43.0
Aa31LG7G3480 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.2e-10 70.5 85 42.4
Aa31sc256G10 Aethionema arabicum HOM05D000003 ORTHO05D000004 1.5e-10 70.1 101 39.6
BolC4t28430H Brassica oleracea HOM05D000003 ORTHO05D009772 1.5e-10 70.1 108 34.3
Aa31sc62G10 Aethionema arabicum HOM05D000003 ORTHO05D009772 2.0e-10 69.7 90 38.9
Aa31LG1G13000 Aethionema arabicum HOM05D000003 ORTHO05D009772 3.4e-10 68.9 113 34.5
Aa31LG4G19050 Aethionema arabicum HOM05D000003 ORTHO05D009772 3.4e-10 68.9 104 35.6
C05p36970 Brassica napus HOM05D001224 ORTHO05D024276 4.4e-10 68.6 74 47.3
Sp1g33730 Schrenkiella parvula HOM05D000003 ORTHO05D009772 4.4e-10 68.6 107 34.6
Aa31LG1G3820 Aethionema arabicum HOM05D000003 ORTHO05D009772 5.8e-10 68.2 124 31.5
Aa31LG8G11280 Aethionema arabicum HOM05D000003 ORTHO05D000006 5.8e-10 68.2 103 35.0
Aa31LG11G5950 Aethionema arabicum HOM05D000003 ORTHO05D000004 7.5e-10 67.8 80 45.0
BcaC02g10929 Brassica carinata HOM05D000459 ORTHO05D000798 7.5e-10 67.8 67 50.7
Aa31LG11G6710 Aethionema arabicum HOM05D000003 ORTHO05D009772 9.8e-10 67.4 110 34.5
Aa31sc404G30 Aethionema arabicum HOM05D000003 ORTHO05D009772 9.8e-10 67.4 105 31.4
AL3G45380 Arabidopsis lyrata HOM05D000003 ORTHO05D009772 9.8e-10 67.4 79 41.8
AL2G19440 Arabidopsis lyrata HOM05D000003 ORTHO05D009772 1.7e-09 66.6 111 29.7
AL6G40320 Arabidopsis lyrata HOM05D000003 ORTHO05D009772 1.7e-09 66.6 74 45.9
Aa31LG8G16480 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.2e-09 66.2 101 30.7
Aa31sc466G10 Aethionema arabicum HOM05D000003 ORTHO05D000004 3.7e-09 65.5 85 37.6
Aa31LG2G16390 Aethionema arabicum HOM05D000003 ORTHO05D000004 4.9e-09 65.1 107 36.4
Sp2g02790 Schrenkiella parvula HOM05D000003 ORTHO05D009772 4.9e-09 65.1 107 34.6
Aa31LG7G1610 Aethionema arabicum HOM05D000003 ORTHO05D009772 6.4e-09 64.7 79 38.0
Aa31sc25G150 Aethionema arabicum HOM05D000003 ORTHO05D009772 6.4e-09 64.7 69 46.4
Aa31LG10G2340 Aethionema arabicum HOM05D000003 ORTHO05D000004 8.3e-09 64.3 125 33.6
Aa31LG10G7630 Aethionema arabicum HOM05D000003 ORTHO05D000004 8.3e-09 64.3 104 33.7
Aa31LG7G9420 Aethionema arabicum HOM05D000003 ORTHO05D009772 8.3e-09 64.3 95 34.7
Aa31LG9G5230 Aethionema arabicum HOM05D000003 ORTHO05D000004 8.3e-09 64.3 121 29.8
AL2G10570 Arabidopsis lyrata HOM05D000003 ORTHO05D009772 8.3e-09 64.3 96 37.5
Aa31LG5G23610 Aethionema arabicum HOM05D000003 ORTHO05D000411 1.1e-08 63.9 125 32.0
Aa31sc411G40 Aethionema arabicum HOM05D005064 ORTHO05D006611 1.1e-08 63.9 94 36.2
A01p14050 Brassica napus HOM05D000485 ORTHO05D000341 1.1e-08 63.9 75 45.3
Aa31LG1G5430 Aethionema arabicum HOM05D000003 ORTHO05D009772 1.4e-08 63.5 101 31.7
Aa31LG2G6440 Aethionema arabicum HOM05D000003 ORTHO05D009772 1.4e-08 63.5 82 35.4
Aa31LG9G4050 Aethionema arabicum HOM05D000003 ORTHO05D009772 1.4e-08 63.5 82 35.4
C09p41800 Brassica napus HOM05D000003 ORTHO05D009772 1.4e-08 63.5 73 42.5
AT3G60040 Arabidopsis thaliana HOM05D000689 ORTHO05D000015 1.9e-08 63.2 56 55.4
BraA01t01688Z Brassica rapa HOM05D000003 ORTHO05D021580 1.9e-08 63.2 47 63.8
Aa31LG1G4840 Aethionema arabicum HOM05D000003 ORTHO05D000004 3.2e-08 62.4 97 36.1
BolC1t02109H Brassica oleracea HOM05D000003 ORTHO05D021580 3.2e-08 62.4 47 63.8
Sp3g31100 Schrenkiella parvula HOM05D001869 ORTHO05D371790 3.2e-08 62.4 82 37.8
Aa31sc210G10 Aethionema arabicum HOM05D000003 ORTHO05D000004 5.4e-08 61.6 103 34.0
Aa31LG3G5620 Aethionema arabicum HOM05D000003 ORTHO05D009772 7.1e-08 61.2 77 37.7
AT5G33330 Arabidopsis thaliana HOM05D000003 ORTHO05D009772 7.1e-08 61.2 89 33.7
Sp6g13220 Schrenkiella parvula HOM05D000003 ORTHO05D000006 7.1e-08 61.2 76 43.4
Aa31LG7G12380 Aethionema arabicum HOM05D000003 ORTHO05D009772 1.6e-07 60.1 116 27.6
BcaB04g20717 Brassica carinata HOM05D000003 ORTHO05D009772 1.6e-07 60.1 120 33.3
BcaB06g27632 Brassica carinata HOM05D000003 ORTHO05D009772 3.5e-07 58.9 89 36.0
BolC4t25971H Brassica oleracea HOM05D001239 ORTHO05D000925 1.0e-06 57.4 127 32.3
Aa31LG1G2520 Aethionema arabicum HOM05D000003 ORTHO05D009772 1.3e-06 57.0 81 33.3
Aa31LG3G4270 Aethionema arabicum HOM05D000003 ORTHO05D000004 2.3e-06 56.2 125 33.6
BcaB03g15420 Brassica carinata HOM05D000003 ORTHO05D009772 3.0e-06 55.8 49 61.2
Sp6g06150 Schrenkiella parvula HOM05D000003 ORTHO05D009772 3.0e-06 55.8 82 40.2
Sp4g07090 Schrenkiella parvula HOM05D000003 ORTHO05D009772 5.1e-06 55.1 78 33.3
Aa31LG5G23430 Aethionema arabicum HOM05D000003 ORTHO05D000004 8.6e-06 54.3 100 33.0
Aa31sc1050G10 Aethionema arabicum HOM05D000003 ORTHO05D009772 8.6e-06 54.3 75 33.3


User provided reference genes

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