Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB02g06522 Brassica carinata HOM05D000179 ORTHO05D023859 1.6e-167 592.8 330 100.0
BcaB02g06525 Brassica carinata HOM05D000179 ORTHO05D000107 4.4e-141 505.0 258 98.8
BcaB02g06518 Brassica carinata HOM05D000179 ORTHO05D000107 5.6e-136 488.0 259 95.8
BcaB02g06520 Brassica carinata HOM05D000179 ORTHO05D000107 1.1e-123 447.2 259 90.0
BcaB06g28761 Brassica carinata HOM05D000179 ORTHO05D000107 1.9e-115 419.9 258 83.7
BcaB02g06519 Brassica carinata HOM05D000179 ORTHO05D000107 4.2e-107 392.1 260 81.2
BcaB02g06526 Brassica carinata HOM05D000179 ORTHO05D000107 7.1e-107 391.3 260 80.8
BcaB02g06527 Brassica carinata HOM05D000179 ORTHO05D000107 1.9e-104 383.3 261 80.1
BcaB03g16360 Brassica carinata HOM05D000179 ORTHO05D000107 5.6e-104 381.7 258 78.7
C05p12490 Brassica napus HOM05D000179 ORTHO05D041569 1.2e-98 364.0 261 73.9
BcaC05g25367 Brassica carinata HOM05D000179 ORTHO05D000107 6.0e-98 361.7 261 73.6
BraA06t24242Z Brassica rapa HOM05D000179 ORTHO05D000107 7.9e-98 361.3 262 74.0
A06p10620 Brassica napus HOM05D000179 ORTHO05D023859 3.9e-97 359.0 260 74.2
BolC5t29998H Brassica oleracea HOM05D000179 ORTHO05D041569 5.7e-96 355.1 262 73.7
BcaC05g25368 Brassica carinata HOM05D000179 ORTHO05D000107 2.1e-95 353.2 261 73.6
C05p12540 Brassica napus HOM05D000179 ORTHO05D023859 8.2e-95 351.3 261 73.2
BolC5t29996H Brassica oleracea HOM05D000179 ORTHO05D000107 3.6e-82 309.3 260 65.4
A06p10640 Brassica napus HOM05D000179 ORTHO05D000107 3.4e-77 292.7 261 64.0
BraA06t24244Z Brassica rapa HOM05D000179 ORTHO05D000107 3.4e-77 292.7 261 64.0
BraA08t35114Z Brassica rapa HOM05D002557 ORTHO05D002563 3.4e-77 292.7 275 61.5
A08p31920 Brassica napus HOM05D002557 ORTHO05D002563 4.5e-77 292.4 275 61.5
C08p16780 Brassica napus HOM05D002557 ORTHO05D002563 2.2e-76 290.0 275 61.1
BolC8t49299H Brassica oleracea HOM05D000179 ORTHO05D000107 1.1e-75 287.7 274 60.9
BcaC07g38747 Brassica carinata HOM05D000179 ORTHO05D000107 3.2e-75 286.2 275 60.4
BcaB03g13092 Brassica carinata HOM05D000179 ORTHO05D000107 7.9e-74 281.6 276 60.9
Thhalv10007538m.g Eutrema salsugineum HOM05D000179 ORTHO05D000107 3.0e-73 279.6 282 60.3
C08p45600 Brassica napus HOM05D000179 ORTHO05D000107 4.4e-72 275.8 274 60.2
BcaC05g25369 Brassica carinata HOM05D000179 ORTHO05D000107 1.3e-71 274.2 190 77.4
BcaC05g25370 Brassica carinata HOM05D000179 ORTHO05D000107 1.3e-71 274.2 190 77.4
Sp1g12930 Schrenkiella parvula HOM05D000179 ORTHO05D000107 8.2e-71 271.6 277 59.9
AL1G26550 Arabidopsis lyrata HOM05D000179 ORTHO05D000107 3.1e-70 269.6 276 60.9
CARHR015080 Cardamine hirsuta HOM05D000179 ORTHO05D000107 9.1e-70 268.1 280 59.6
BcaC07g41561 Brassica carinata HOM05D000179 ORTHO05D000107 2.6e-69 266.5 274 58.8
BolC8t52113H Brassica oleracea HOM05D000179 ORTHO05D000107 2.6e-69 266.5 274 58.8
BcaB08g34406 Brassica carinata HOM05D000179 ORTHO05D000107 2.9e-68 263.1 276 58.7
BraA09t41565Z Brassica rapa HOM05D000179 ORTHO05D000107 1.1e-67 261.2 274 58.0
AT1G14580 Arabidopsis thaliana HOM05D000179 ORTHO05D000107 1.5e-67 260.8 279 59.5
A09p62020 Brassica napus HOM05D000179 ORTHO05D000107 2.5e-67 260.0 274 57.7
BcaB02g06524 Brassica carinata HOM05D000179 ORTHO05D000107 1.3e-63 247.7 176 78.4
Carub.0001s1434 Capsella rubella HOM05D000179 ORTHO05D000107 1.6e-61 240.7 283 55.5
BcaNung05659 Brassica carinata HOM05D000179 ORTHO05D000107 2.7e-58 229.9 275 52.4
BcaB02g06523 Brassica carinata HOM05D000179 ORTHO05D023859 1.2e-53 214.5 163 70.6
BcaC07g38748 Brassica carinata HOM05D000179 ORTHO05D000107 1.2e-53 214.5 275 50.5
BcaB02g06899 Brassica carinata HOM05D000179 ORTHO05D000107 1.2e-48 198.0 286 45.5
BcaC05g27218 Brassica carinata HOM05D000179 ORTHO05D024334 3.7e-47 193.0 296 47.0
BolC5t31851H Brassica oleracea HOM05D000179 ORTHO05D024334 3.7e-47 193.0 296 47.0
BcaB07g32855 Brassica carinata HOM05D000179 ORTHO05D000107 4.1e-46 189.5 292 44.5
C05p31260 Brassica napus HOM05D000179 ORTHO05D024334 1.0e-44 184.9 309 44.3
BcaB07g32850 Brassica carinata HOM05D000179 ORTHO05D000107 8.9e-41 171.8 297 42.1
AL5G11310 Arabidopsis lyrata HOM05D000179 ORTHO05D000107 9.2e-38 161.8 329 39.8
BcaB02g06521 Brassica carinata HOM05D000179 ORTHO05D000107 2.0e-37 160.6 130 70.8
A09p34300 Brassica napus HOM05D000179 ORTHO05D024334 4.6e-37 159.5 292 42.1
CARHR288910 Cardamine hirsuta HOM05D000179 ORTHO05D000107 1.7e-36 157.5 325 39.1
AT2G02080 Arabidopsis thaliana HOM05D000179 ORTHO05D000107 2.9e-36 156.8 330 40.3
Carub.0005s0111 Capsella rubella HOM05D000179 ORTHO05D000107 1.5e-35 154.5 329 39.2
Sp2g13500 Schrenkiella parvula HOM05D000179 ORTHO05D000107 1.9e-35 154.1 334 39.5
BcaB02g06898 Brassica carinata HOM05D000179 ORTHO05D000107 7.3e-35 152.1 345 36.2
BraA09t38976Z Brassica rapa HOM05D000179 ORTHO05D024334 1.6e-34 151.0 301 39.5
Thhalv10004022m.g Eutrema salsugineum HOM05D000179 ORTHO05D000107 2.1e-34 150.6 328 39.6
BcaB07g30713 Brassica carinata HOM05D000179 ORTHO05D000107 4.0e-33 146.4 314 39.8
BcaB07g30714 Brassica carinata HOM05D000179 ORTHO05D000107 1.5e-32 144.4 313 39.6
BraA09t37980Z Brassica rapa HOM05D000179 ORTHO05D000107 1.7e-31 141.0 309 37.5
A09p23780 Brassica napus HOM05D000179 ORTHO05D000107 2.9e-31 140.2 309 37.5
C09p30640 Brassica napus HOM05D000179 ORTHO05D000107 4.1e-30 136.3 314 38.9
BcaC04g21533 Brassica carinata HOM05D000179 ORTHO05D000107 5.4e-30 136.0 314 38.9
BolC9t55927H Brassica oleracea HOM05D000179 ORTHO05D000107 3.5e-29 133.3 314 38.5
BcaC06g34080 Brassica carinata HOM05D000179 ORTHO05D000107 7.8e-29 132.1 325 36.9
C07p32910 Brassica napus HOM05D000179 ORTHO05D000107 7.8e-29 132.1 325 36.9
BolC7t43806H Brassica oleracea HOM05D000179 ORTHO05D000107 7.8e-29 132.1 325 36.9
BraA06t27259Z Brassica rapa HOM05D000179 ORTHO05D000107 2.3e-28 130.6 320 36.9
C05p12530 Brassica napus HOM05D000179 ORTHO05D023859 5.0e-28 129.4 83 78.3
A06p43810 Brassica napus HOM05D000179 ORTHO05D000107 6.6e-28 129.0 320 36.6
THA.LOC104801767 Tarenaya hassleriana HOM05D000179 ORTHO05D000107 5.6e-27 125.9 315 39.4
BcaC06g31250 Brassica carinata HOM05D000179 ORTHO05D000107 2.3e-25 120.6 297 38.0
Aa31LG1G490 Aethionema arabicum HOM05D000179 ORTHO05D000107 8.9e-25 118.6 301 38.2
THA.LOC104805117 Tarenaya hassleriana HOM05D000179 ORTHO05D000107 2.9e-23 113.6 336 33.3
BcaB07g30355 Brassica carinata HOM05D000179 ORTHO05D000107 4.9e-23 112.8 313 35.1
BcaC03g17113 Brassica carinata HOM05D000179 ORTHO05D000107 1.3e-20 104.8 311 32.5
BraA02t08279Z Brassica rapa HOM05D000179 ORTHO05D000107 5.6e-19 99.4 311 31.8
C02p50220 Brassica napus HOM05D000179 ORTHO05D000107 7.3e-19 99.0 311 31.5
BolC2t11100H Brassica oleracea HOM05D000179 ORTHO05D000107 7.3e-19 99.0 311 31.5
Aa31LG2G7860 Aethionema arabicum HOM05D000179 ORTHO05D000107 8.1e-18 95.5 294 34.4
A02p32640 Brassica napus HOM05D000179 ORTHO05D000107 9.9e-16 88.6 171 38.6
CARHR058780 Cardamine hirsuta HOM05D000179 ORTHO05D034035 2.4e-14 84.0 139 46.8
CARHR033960 Cardamine hirsuta HOM05D000179 ORTHO05D000107 3.2e-06 57.0 74 41.9
CARHR058740 Cardamine hirsuta HOM05D000179 ORTHO05D034035 9.3e-06 55.5 72 50.0


User provided reference genes

Program Settings