Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g06336 Brassica carinata HOM05D004649 ORTHO05D005446 1.2e-226 789.6 426 100.0
A03p06510 Brassica napus HOM05D004649 ORTHO05D005446 7.8e-207 723.8 426 89.0
BraA03t09983Z Brassica rapa HOM05D004649 ORTHO05D005446 1.3e-206 723.0 426 89.0
BcaNung03172 Brassica carinata HOM05D004649 ORTHO05D005446 8.6e-206 720.3 425 86.6
Sp6g29780 Schrenkiella parvula HOM05D004649 ORTHO05D005446 2.5e-205 718.8 426 86.4
BcaC03g13505 Brassica carinata HOM05D004649 ORTHO05D005446 3.1e-203 711.8 427 85.5
BolC2t06607H Brassica oleracea HOM05D005656 ORTHO05D005446 4.0e-203 711.4 426 85.4
BraA02t05210Z Brassica rapa HOM05D004649 ORTHO05D005446 5.2e-203 711.1 426 85.0
A02p02400 Brassica napus HOM05D005656 ORTHO05D007094 6.8e-203 710.7 425 84.9
C02p06640 Brassica napus HOM05D004649 ORTHO05D005446 1.2e-202 709.9 427 85.2
Thhalv10013615m.g Eutrema salsugineum HOM05D004649 ORTHO05D005446 3.8e-201 704.9 426 84.0
BcaB08g36970 Brassica carinata HOM05D004649 ORTHO05D005446 2.7e-191 672.2 426 81.9
C09p62910 Brassica napus HOM05D005656 ORTHO05D007094 1.6e-188 662.9 425 80.5
BolC9t59128H Brassica oleracea HOM05D005656 ORTHO05D007094 1.6e-188 662.9 425 80.5
BcaC04g19049 Brassica carinata HOM05D005656 ORTHO05D007094 2.8e-188 662.1 425 80.5
BraA10t44487Z Brassica rapa HOM05D005656 ORTHO05D007094 1.8e-187 659.4 425 80.0
Carub.0006s1245 Capsella rubella HOM05D004649 ORTHO05D005446 6.9e-187 657.5 426 78.9
A10p24220 Brassica napus HOM05D005656 ORTHO05D007094 5.8e-186 654.4 425 79.8
AT5G14250 Arabidopsis thaliana HOM05D004649 ORTHO05D005446 9.9e-186 653.7 426 78.6
Aa31LG11G15040 Aethionema arabicum HOM05D004649 ORTHO05D005446 2.1e-183 646.0 426 78.6
AL6G24930 Arabidopsis lyrata HOM05D004649 ORTHO05D005446 5.3e-179 631.3 426 77.0
THA.LOC104821114 Tarenaya hassleriana HOM05D004649 ORTHO05D005446 5.7e-165 584.7 426 70.9
CARHR199090 Cardamine hirsuta HOM05D004649 ORTHO05D005446 2.8e-164 582.4 394 76.4
CSS0030171 Camellia sinensis var. sinensis HOM05D004649 ORTHO05D005446 1.8e-150 536.6 426 64.6
CSS0047966 Camellia sinensis var. sinensis HOM05D004649 ORTHO05D005446 3.9e-150 535.4 426 64.6
Atru.chr6.2512 Acer truncatum HOM05D004649 ORTHO05D005446 5.7e-149 531.6 426 65.0
Duzib264G0046 Durio zibethinus HOM05D004649 ORTHO05D005446 7.4e-149 531.2 426 64.8
CANSAT64G0679 Cannabis sativa HOM05D004649 ORTHO05D005446 9.7e-149 530.8 426 65.7
Dinv33366 Davidia involucrata HOM05D004649 ORTHO05D005446 1.7e-148 530.0 426 64.8
Gorai.012G088900 Gossypium raimondii HOM05D004649 ORTHO05D005446 1.7e-148 530.0 426 65.7
Thecc.04G029900 Theobroma cacao HOM05D004649 ORTHO05D005446 2.2e-148 529.6 423 64.3
Manes.17G106100 Manihot esculenta HOM05D004649 ORTHO05D005446 6.3e-148 528.1 426 64.6
TWI36G0899 Tripterygium wilfordii HOM05D004649 ORTHO05D005446 8.2e-148 527.7 426 64.6
Ciclev10015345m.g Citrus clementina HOM05D004649 ORTHO05D005446 1.8e-147 526.6 426 64.3
Dinv25679 Davidia involucrata HOM05D004649 ORTHO05D005446 1.8e-147 526.6 424 64.4
Gohir.D04G079000 Gossypium hirsutum HOM05D004649 ORTHO05D005446 3.1e-147 525.8 426 65.3
Gohir.A05G340700 Gossypium hirsutum HOM05D004649 ORTHO05D005446 7.0e-147 524.6 426 64.8
Prupe.3G302400 Prunus persica HOM05D004649 ORTHO05D005446 9.1e-147 524.2 426 63.8
TAR371G0838 Trochodendron aralioides HOM05D004649 ORTHO05D005446 1.0e-145 520.8 426 63.6
Cpa.g.sc130.9 Carica papaya HOM05D004649 ORTHO05D005446 1.3e-145 520.4 431 63.8
GSVIVG01001824001 Vitis vinifera HOM05D004649 ORTHO05D005446 1.7e-145 520.0 426 63.4
Actinidia05924 Actinidia chinensis HOM05D004649 ORTHO05D005446 5.0e-145 518.5 427 63.9
Gorai.006G040000 Gossypium raimondii HOM05D004649 ORTHO05D005446 1.4e-144 516.9 426 62.9
Potri.001G334200 Populus trichocarpa HOM05D004649 ORTHO05D005446 4.2e-144 515.4 426 63.8
Gohir.A09G034200 Gossypium hirsutum HOM05D004649 ORTHO05D005446 5.5e-144 515.0 426 62.7
QL02p072453 Quercus lobata HOM05D004649 ORTHO05D005446 9.4e-144 514.2 425 63.1
vmacro05936 Vaccinium macrocarpon HOM05D004649 ORTHO05D005446 9.4e-144 514.2 424 62.7
Rhsim10G0008900 Rhododendron simsii HOM05D004649 ORTHO05D005446 2.7e-143 512.7 427 62.5
RcHm_v2.0_Chr2g0174731 Rosa chinensis HOM05D004649 ORTHO05D005446 2.7e-143 512.7 423 61.9
Sopen02g038570 Solanum pennellii HOM05D004649 ORTHO05D005446 2.7e-143 512.7 426 61.3
Nitab4.5_0000559g0250 Nicotiana tabacum HOM05D004649 ORTHO05D005446 1.4e-142 510.4 426 61.3
Solyc02g093920.2 Solanum lycopersicum HOM05D004649 ORTHO05D005446 1.8e-142 510.0 426 61.0
MSTRG.15559 Avicennia marina HOM05D004649 ORTHO05D005446 3.0e-142 509.2 426 60.6
PGSC0003DMG400020222 Solanum tuberosum HOM05D004649 ORTHO05D005446 3.0e-142 509.2 426 60.8
BcaB01g05123 Brassica carinata HOM05D004649 ORTHO05D005446 6.7e-142 508.1 355 77.7
Migut.K01446 Erythranthe guttata HOM05D004649 ORTHO05D005446 1.1e-141 507.3 426 61.7
CiPaw.04G034500 Carya illinoinensis HOM05D004649 ORTHO05D005446 1.5e-141 506.9 422 62.1
Glyma.05G075400 Glycine max HOM05D004649 ORTHO05D005446 3.3e-141 505.8 426 62.4
VMungo1080G0439 Vigna mungo HOM05D004649 ORTHO05D005446 5.7e-141 505.0 426 62.0
Nitab4.5_0001031g0020 Nicotiana tabacum HOM05D004649 ORTHO05D005446 1.3e-140 503.8 426 60.3
AUR62036815 Chenopodium quinoa HOM05D004649 ORTHO05D005446 2.2e-140 503.1 426 62.2
CAN.G473.77 Capsicum annuum HOM05D004649 ORTHO05D005446 2.8e-140 502.7 426 60.3
arahy.Tifrunner.gnm1.ann1.2RTQ1W Arachis hypogaea HOM05D004649 ORTHO05D005446 4.8e-140 501.9 428 62.6
MD17G1015500 Malus domestica HOM05D004649 ORTHO05D005446 6.3e-140 501.5 426 61.5
PGR142G2348 Punica granatum HOM05D004649 ORTHO05D005446 8.2e-140 501.1 424 62.5
AUR62033709 Chenopodium quinoa HOM05D004649 ORTHO05D005446 1.8e-139 500.0 426 61.5
Nitab4.5_0006819g0030 Nicotiana tabacum HOM05D004649 ORTHO05D005446 3.1e-139 499.2 433 59.6
MELO3C008213.2 Cucumis melo HOM05D004649 ORTHO05D005446 5.3e-139 498.4 426 61.3
HanXRQChr14g0450901 Helianthus annuus HOM05D004649 ORTHO05D005446 5.3e-139 498.4 426 59.9
MD09G1015400 Malus domestica HOM05D004649 ORTHO05D005446 7.0e-139 498.0 426 61.3
FAN09G0187 Fragaria x ananassa HOM05D004649 ORTHO05D005446 1.6e-138 496.9 423 60.0
Glyma.19G075700 Glycine max HOM05D004649 ORTHO05D005446 2.0e-138 496.5 426 61.3
CsaV3_6G001150 Cucumis sativus L. HOM05D004649 ORTHO05D005446 3.5e-138 495.7 426 60.8
Gohir.D09G035100 Gossypium hirsutum HOM05D004649 ORTHO05D005446 3.5e-138 495.7 426 61.0
Phvul.004G055700 Phaseolus vulgaris HOM05D004649 ORTHO05D005446 4.5e-138 495.4 426 60.6
Cc07_g00570 Coffea canephora HOM05D004649 ORTHO05D005446 5.9e-138 495.0 430 61.4
Ca_04417_v3 Cicer arietinum L. HOM05D004649 ORTHO05D005446 1.0e-137 494.2 427 61.4
FvH4_6g52990 Fragaria vesca HOM05D004649 ORTHO05D005446 1.3e-137 493.8 423 59.8
Lsat_1_v5_gn_2_93941 Lactuca sativa HOM05D004649 ORTHO05D005446 1.3e-137 493.8 425 59.8
arahy.Tifrunner.gnm1.ann1.B3K3FC Arachis hypogaea HOM05D004649 ORTHO05D005446 1.7e-137 493.4 435 61.4
CAN.G1965.13 Capsicum annuum HOM05D004649 ORTHO05D005446 6.5e-137 491.5 425 60.0
FAN02G2492 Fragaria x ananassa HOM05D004649 ORTHO05D005446 1.1e-136 490.7 423 59.3
Lalb_Chr02g0157841 Lupinus albus HOM05D004649 ORTHO05D005446 1.9e-136 490.0 428 61.2
Medtr6g023350 Medicago truncatula HOM05D004649 ORTHO05D005446 2.5e-136 489.6 428 61.4
SGA_v2.0_scaffold154G37160 Striga asiatica HOM05D004649 ORTHO05D005446 4.2e-136 488.8 425 60.2
C03p07530 Brassica napus HOM05D004649 ORTHO05D005446 7.2e-136 488.0 366 73.8
ECA238G0199 Erigeron canadensis HOM05D004649 ORTHO05D005446 1.2e-135 487.3 426 58.9
COL.COLO4_08766 Corchorus olitorius HOM05D004649 ORTHO05D005446 6.1e-135 485.0 423 61.2
DCAR_011306 Daucus carota HOM05D004649 ORTHO05D005446 6.1e-135 485.0 427 59.0
Duzib147G0539 Durio zibethinus HOM05D004649 ORTHO05D005446 1.8e-134 483.4 426 60.6
HanXRQChr07g0198311 Helianthus annuus HOM05D004649 ORTHO05D005446 6.7e-134 481.5 426 58.5
CiPaw.03G052200 Carya illinoinensis HOM05D004649 ORTHO05D005446 3.3e-133 479.2 426 59.9
TPR.G7524 Trifolium pratense HOM05D004649 ORTHO05D005446 4.4e-133 478.8 428 59.6
Eucgr.I01664 Eucalyptus grandis HOM05D004649 ORTHO05D005446 4.8e-132 475.3 403 60.8
Sed0002339 Sechium edule HOM05D004649 ORTHO05D005446 1.8e-131 473.4 426 59.4
CDE09G0552 Ceratophyllum demersum HOM05D004649 ORTHO05D005446 7.0e-131 471.5 426 57.3
Lj1g0022023 Lotus japonicus HOM05D004649 ORTHO05D005446 3.5e-130 469.2 428 58.4
ClCG11G006900 Citrullus lanatus HOM05D004649 ORTHO05D005446 7.7e-130 468.0 460 55.9
Psat1g084880 Pisum sativum HOM05D004649 ORTHO05D005446 1.7e-129 466.8 428 59.1
FAN05G5354 Fragaria x ananassa HOM05D004649 ORTHO05D005446 2.2e-129 466.5 465 54.2
Peaxi162Scf00420g00411 Petunia axillaris HOM05D004649 ORTHO05D005446 1.5e-128 463.8 434 58.3
Aqoxy5G03494 Aquilegia oxysepala HOM05D004649 ORTHO05D005446 1.9e-128 463.4 430 56.5
Peaxi162Scf00700g00129 Petunia axillaris HOM05D004649 ORTHO05D005446 9.4e-128 461.1 421 58.2
HPP92_017768 Vanilla planifolia HOM05D004649 ORTHO05D005446 5.2e-126 455.3 423 54.8
Gohir.D10G084700 Gossypium hirsutum HOM05D004649 ORTHO05D005446 2.6e-125 453.0 426 57.0
Hund06757 Selenicereus undatus HOM05D004649 ORTHO05D005446 5.7e-125 451.8 426 58.5
Haze_14832 Corylus avellana HOM05D004649 ORTHO05D005446 1.8e-123 446.8 459 53.8
Gorai.011G092400 Gossypium raimondii HOM05D004649 ORTHO05D005446 1.6e-122 443.7 426 57.7
Nitab4.5_0002887g0140 Nicotiana tabacum HOM05D004649 ORTHO05D005446 2.0e-122 443.4 426 56.3
Nn2g10549 Nelumbo nucifera HOM05D004649 ORTHO05D005446 1.5e-120 437.2 426 55.9
PSO782G5348 Papaver somniferum HOM05D004649 ORTHO05D005446 5.5e-120 435.3 427 54.8
Sc07g0004210 Simmondsia chinensis HOM05D004649 ORTHO05D005446 2.3e-118 429.9 383 59.5
DCAR_015086 Daucus carota HOM05D004649 ORTHO05D005446 4.0e-118 429.1 421 53.4
Lj7C608T4 Lonicera japonica HOM05D004649 ORTHO05D005446 4.4e-117 425.6 426 54.9
Os08g0119000 Oryza sativa ssp. japonica HOM05D004649 ORTHO05D005446 5.4e-115 418.7 427 52.9
Potri.017G066300 Populus trichocarpa HOM05D004649 ORTHO05D005446 3.5e-114 416.0 325 66.2
Zm00001eb261210 Zea mays HOM05D004649 ORTHO05D005446 3.5e-114 416.0 426 53.3
Manes.15G158000 Manihot esculenta HOM05D004649 ORTHO05D005446 2.9e-113 412.9 312 68.6
unitig_52.g17652 Utricularia gibba HOM05D004649 ORTHO05D005446 2.8e-111 406.4 440 52.3
Sed0000018 Sechium edule HOM05D004649 ORTHO05D005446 8.0e-111 404.8 426 52.6
ATR0124G048 Amborella trichopoda HOM05D004649 ORTHO05D005446 2.6e-109 399.8 358 57.0
Aqoxy3G01472 Aquilegia oxysepala HOM05D004649 ORTHO05D005446 2.2e-108 396.7 427 52.5
CDE02G4363 Ceratophyllum demersum HOM05D004649 ORTHO05D005446 4.3e-104 382.5 448 49.1
Mapoly0005s0216 Marchantia polymorpha HOM05D004649 ORTHO05D005446 1.2e-103 380.9 428 48.4
Pp3c11_20060 Physcomitrium patens HOM05D004649 ORTHO05D005446 6.2e-103 378.6 428 47.0
SMO351G0195 Selaginella moellendorffii HOM05D004649 ORTHO05D005446 3.1e-102 376.3 425 47.8
AagrBONN_evm.TU.Sc2ySwM_368.1057 Anthoceros agrestis HOM05D004649 ORTHO05D005446 5.1e-97 359.0 452 45.4
EL10As11g23981 Beta vulgaris HOM05D004649 ORTHO05D005446 8.9e-94 348.2 390 51.3
C09p61600 Brassica napus HOM05D004649 ORTHO05D005446 3.2e-91 339.7 325 60.6
CBR_g75710 Chara braunii HOM05D004649 ORTHO05D005446 7.3e-88 328.6 430 44.4
Nn3g16527 Nelumbo nucifera HOM05D004649 ORTHO05D005446 3.6e-87 326.2 283 58.3
PSO017G3153 Papaver somniferum HOM05D004649 ORTHO05D005446 6.2e-87 325.5 400 47.2
Zm00001eb173540 Zea mays HOM05D004649 ORTHO05D005446 8.7e-81 305.1 322 52.2
Sabra16G0215300 Salix brachista HOM05D004649 ORTHO05D005446 4.3e-80 302.8 242 66.5
Hma1.2p1_0571F.1_g180750 Hydrangea macrophylla HOM05D004649 ORTHO05D005446 6.2e-79 298.9 240 66.7
BcaC04g18970 Brassica carinata HOM05D004649 ORTHO05D005446 3.1e-78 296.6 359 53.5
Actinidia36180 Actinidia chinensis HOM05D004649 ORTHO05D005446 9.9e-77 291.6 430 44.7
A03p07400 Brassica napus HOM05D004649 ORTHO05D005446 2.4e-75 287.0 194 77.8
BolC9t59028H Brassica oleracea HOM05D004649 ORTHO05D005446 3.1e-70 270.0 306 55.6
BraA03t10063Z Brassica rapa HOM05D004649 ORTHO05D005446 1.7e-68 264.2 194 72.2
Cre16.g671100 Chlamydomonas reinhardtii HOM05D004649 ORTHO05D005446 1.9e-59 234.2 434 35.7
Gohir.A01G185660 Gossypium hirsutum HOM05D004649 ORTHO05D005446 8.7e-57 225.3 214 57.0
PRCOL_00002547 Prasinoderma coloniale HOM05D004649 ORTHO05D005446 5.3e-54 216.1 333 39.6
CAN.G473.64 Capsicum annuum HOM05D004649 ORTHO05D005446 3.7e-39 166.8 176 55.7
SEGI_26946 Sequoiadendron giganteum HOM05D004649 ORTHO05D005446 6.3e-39 166.0 139 56.8
BolC3t13254H Brassica oleracea HOM05D004649 ORTHO05D005446 1.3e-36 158.3 106 79.2
Sabra07G0059200 Salix brachista HOM05D004649 ORTHO05D005446 1.8e-33 147.9 251 38.2
MCO12G022 Micromonas commoda HOM05D004649 ORTHO05D005446 5.5e-27 126.3 332 29.2
Sabra07G0059100 Salix brachista HOM05D005682 ORTHO05D007050 8.8e-25 119.0 187 38.5
BcaB08g36975 Brassica carinata HOM05D005656 ORTHO05D007094 3.3e-24 117.1 59 93.2
FAN09G3197 Fragaria x ananassa HOM05D004649 ORTHO05D005446 1.4e-22 111.7 80 58.8
QL12p000006 Quercus lobata HOM05D004649 ORTHO05D005446 9.4e-19 99.0 78 60.3
QL12p000135 Quercus lobata HOM05D004649 ORTHO05D005446 9.4e-19 99.0 78 60.3
Duzib268G1750 Durio zibethinus HOM05D004649 ORTHO05D005446 8.0e-18 95.9 125 40.8
C03p08440 Brassica napus HOM05D002468 ORTHO05D005371 8.3e-15 85.9 49 83.7
BolC3t13348H Brassica oleracea HOM05D002468 ORTHO05D005371 8.3e-15 85.9 49 83.7
Oeu042415.1 Olea europaea HOM05D004649 ORTHO05D005446 4.5e-13 80.1 69 60.9
Aqoxy5G03476 Aquilegia oxysepala HOM05D004649 ORTHO05D005446 2.2e-07 61.2 60 51.7
Hma1.2p1_0571F.1_g180740 Hydrangea macrophylla HOM05D004649 ORTHO05D005446 1.4e-06 58.5 62 48.4


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