Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g05017 Brassica carinata HOM05D000877 ORTHO05D024021 4.1e-74 281.2 132 100.0
BcaB01g05019 Brassica carinata HOM05D000877 ORTHO05D024021 4.5e-44 181.4 110 78.2
Lj7A407G44 Lonicera japonica HOM05D000877 ORTHO05D006099 1.0e-43 180.3 106 79.2
C03p07880 Brassica napus HOM05D000877 ORTHO05D006099 2.2e-43 179.1 110 77.3
Dinv33678 Davidia involucrata HOM05D000877 ORTHO05D006099 6.5e-43 177.6 106 79.2
HanXRQChr14g0448861 Helianthus annuus HOM05D000877 ORTHO05D006099 8.4e-43 177.2 106 77.4
BolC3t13286H Brassica oleracea HOM05D000877 ORTHO05D006099 1.1e-42 176.8 123 69.1
Dinv35009 Davidia involucrata HOM05D000877 ORTHO05D006099 1.9e-42 176.0 106 78.3
Migut.H00173 Erythranthe guttata HOM05D000877 ORTHO05D006099 1.9e-42 176.0 106 76.4
SGA_v2.0_scaffold135G34823 Striga asiatica HOM05D000877 ORTHO05D006099 1.9e-42 176.0 106 77.4
MSTRG.3199 Avicennia marina HOM05D000877 ORTHO05D006099 2.5e-42 175.6 106 77.4
BcaB01g05088 Brassica carinata HOM05D000877 ORTHO05D006099 2.5e-42 175.6 110 75.5
Prupe.3G276800 Prunus persica HOM05D000877 ORTHO05D006099 2.5e-42 175.6 106 77.4
Ah.16g102250 Amaranthus hybridus HOM05D000877 ORTHO05D006099 3.2e-42 175.3 106 74.5
A02p02790 Brassica napus HOM05D000877 ORTHO05D006099 3.2e-42 175.3 110 76.4
A03p06880 Brassica napus HOM05D000877 ORTHO05D006099 3.2e-42 175.3 110 75.5
BraA02t05252Z Brassica rapa HOM05D000877 ORTHO05D006099 3.2e-42 175.3 110 76.4
BraA03t10011Z Brassica rapa HOM05D000877 ORTHO05D006099 3.2e-42 175.3 110 75.5
BcaC03g13442 Brassica carinata HOM05D000877 ORTHO05D006099 4.2e-42 174.9 110 75.5
C02p07410 Brassica napus HOM05D000877 ORTHO05D006099 4.2e-42 174.9 110 75.5
BolC2t06672H Brassica oleracea HOM05D000877 ORTHO05D006099 4.2e-42 174.9 110 75.5
ECA238G2186 Erigeron canadensis HOM05D000877 ORTHO05D006099 4.2e-42 174.9 106 75.5
Lsat_1_v5_gn_2_90780 Lactuca sativa HOM05D000877 ORTHO05D006099 4.2e-42 174.9 106 75.5
Sp6g29100 Schrenkiella parvula HOM05D000877 ORTHO05D006099 4.2e-42 174.9 110 75.5
EL10Ac2g04636 Beta vulgaris HOM05D000877 ORTHO05D006099 5.5e-42 174.5 106 75.5
RcHm_v2.0_Chr2g0170081 Rosa chinensis HOM05D000877 ORTHO05D006099 5.5e-42 174.5 106 76.4
Carub.0006s1311 Capsella rubella HOM05D000877 ORTHO05D006099 7.1e-42 174.1 106 77.4
MD09G1040900 Malus domestica HOM05D000877 ORTHO05D006099 7.1e-42 174.1 106 77.4
Thhalv10012487m.g Eutrema salsugineum HOM05D000877 ORTHO05D006099 9.3e-42 173.7 106 76.4
Oeu050233.1 Olea europaea HOM05D000877 ORTHO05D006099 1.2e-41 173.3 106 76.4
THA.LOC104821170 Tarenaya hassleriana HOM05D000877 ORTHO05D006099 1.2e-41 173.3 106 75.5
vmacro05784 Vaccinium macrocarpon HOM05D000877 ORTHO05D006099 1.6e-41 172.9 106 75.5
Cfa007480 Carpinus fangiana HOM05D000877 ORTHO05D006099 2.1e-41 172.6 106 76.4
AUR62014574 Chenopodium quinoa HOM05D000877 ORTHO05D006099 2.1e-41 172.6 106 73.6
AUR62039387 Chenopodium quinoa HOM05D000877 ORTHO05D006099 2.1e-41 172.6 106 73.6
Haze_14617 Corylus avellana HOM05D000877 ORTHO05D006099 2.1e-41 172.6 106 76.4
Actinidia06049 Actinidia chinensis HOM05D000877 ORTHO05D006099 3.5e-41 171.8 106 75.5
CiPaw.03G033300 Carya illinoinensis HOM05D000877 ORTHO05D006099 3.5e-41 171.8 106 75.5
TAR371G0342 Trochodendron aralioides HOM05D000877 ORTHO05D006099 3.5e-41 171.8 106 75.5
TAR371G0744 Trochodendron aralioides HOM05D000877 ORTHO05D024021 3.5e-41 171.8 106 75.5
unitig_699.g19885 Utricularia gibba HOM05D000877 ORTHO05D006099 3.5e-41 171.8 106 75.5
MSTRG.23976 Avicennia marina HOM05D000877 ORTHO05D006099 4.6e-41 171.4 106 74.5
TAR629G1000 Trochodendron aralioides HOM05D000877 ORTHO05D006099 4.6e-41 171.4 106 75.5
AL6G25740 Arabidopsis lyrata HOM05D000877 ORTHO05D006099 6.0e-41 171.0 106 75.5
PSO161G0067 Papaver somniferum HOM05D000877 ORTHO05D006099 6.0e-41 171.0 106 74.5
PSO478G2265 Papaver somniferum HOM05D000877 ORTHO05D006099 6.0e-41 171.0 106 74.5
AT5G14950 Arabidopsis thaliana HOM05D000877 ORTHO05D006099 7.9e-41 170.6 106 75.5
Cc07_g02730 Coffea canephora HOM05D000877 ORTHO05D006099 7.9e-41 170.6 106 75.5
FvH4_6g49910 Fragaria vesca HOM05D000877 ORTHO05D006099 7.9e-41 170.6 106 74.5
FAN02G4060 Fragaria x ananassa HOM05D000877 ORTHO05D006099 7.9e-41 170.6 106 74.5
FAN05G2327 Fragaria x ananassa HOM05D000877 ORTHO05D006099 7.9e-41 170.6 106 74.5
FAN09G1274 Fragaria x ananassa HOM05D000877 ORTHO05D006099 7.9e-41 170.6 106 74.5
FAN14G5633 Fragaria x ananassa HOM05D000877 ORTHO05D006099 7.9e-41 170.6 106 74.5
Hund13754 Selenicereus undatus HOM05D000877 ORTHO05D006099 7.9e-41 170.6 103 74.8
PGR083G2584 Punica granatum HOM05D000877 ORTHO05D006099 1.0e-40 170.2 81 95.1
MELO3C009914.2 Cucumis melo HOM05D000877 ORTHO05D006099 1.3e-40 169.9 82 92.7
CsaV3_3G041960 Cucumis sativus L. HOM05D000877 ORTHO05D006099 1.3e-40 169.9 82 92.7
Lj2g0013078 Lotus japonicus HOM05D000877 ORTHO05D006099 1.3e-40 169.9 106 73.6
RhsimUnG0168300 Rhododendron simsii HOM05D000877 ORTHO05D006099 1.3e-40 169.9 105 75.2
Sed0005677 Sechium edule HOM05D000877 ORTHO05D006099 1.3e-40 169.9 82 92.7
Atru.chr6.2159 Acer truncatum HOM05D000877 ORTHO05D006099 1.8e-40 169.5 106 75.5
Eucgr.J02166 Eucalyptus grandis HOM05D000877 ORTHO05D006099 2.3e-40 169.1 105 75.2
Nn4g22930 Nelumbo nucifera HOM05D000877 ORTHO05D006099 3.0e-40 168.7 96 81.2
Aa31LG11G14550 Aethionema arabicum HOM05D000877 ORTHO05D006099 3.9e-40 168.3 81 91.4
Medtr4g071680 Medicago truncatula HOM05D000877 ORTHO05D006099 3.9e-40 168.3 106 72.6
Medtr6g008850 Medicago truncatula HOM05D000877 ORTHO05D006099 3.9e-40 168.3 106 72.6
VMungo0464G1235 Vigna mungo HOM05D000877 ORTHO05D006099 3.9e-40 168.3 106 74.5
GSVIVG01032586001 Vitis vinifera HOM05D000877 ORTHO05D006099 3.9e-40 168.3 106 72.6
CARHR198360 Cardamine hirsuta HOM05D000877 ORTHO05D006099 5.1e-40 167.9 106 73.6
Duzib147G0134 Durio zibethinus HOM05D000877 ORTHO05D006099 5.1e-40 167.9 106 74.5
Ca_04234_v3 Cicer arietinum L. HOM05D000877 ORTHO05D006099 6.7e-40 167.5 106 73.6
ClCG10G014620 Citrullus lanatus HOM05D000877 ORTHO05D006099 6.7e-40 167.5 82 91.5
Gohir.A09G024200 Gossypium hirsutum HOM05D000877 ORTHO05D006099 6.7e-40 167.5 106 75.5
Hma1.2p1_0697F.1_g205150 Hydrangea macrophylla HOM05D000877 ORTHO05D006099 6.7e-40 167.5 106 73.6
Hma1.2p1_0849F.1_g228094 Hydrangea macrophylla HOM05D000877 ORTHO05D006099 6.7e-40 167.5 106 73.6
Solyc02g087290.3 Solanum lycopersicum HOM05D000877 ORTHO05D006099 6.7e-40 167.5 106 71.7
Sopen02g032050 Solanum pennellii HOM05D000877 ORTHO05D006099 6.7e-40 167.5 106 71.7
PGSC0003DMG400001394 Solanum tuberosum HOM05D000877 ORTHO05D006099 6.7e-40 167.5 106 71.7
Gohir.D09G023400 Gossypium hirsutum HOM05D000877 ORTHO05D006099 8.7e-40 167.2 106 75.5
Gorai.006G027500 Gossypium raimondii HOM05D000877 ORTHO05D006099 8.7e-40 167.2 106 75.5
Sc11g0007990 Simmondsia chinensis HOM05D000877 ORTHO05D006099 8.7e-40 167.2 106 71.7
CAN.G206.66 Capsicum annuum HOM05D000877 ORTHO05D006099 1.1e-39 166.8 106 71.7
DCAR_011189 Daucus carota HOM05D000877 ORTHO05D006099 1.1e-39 166.8 106 73.6
Lalb_Chr02g0159851 Lupinus albus HOM05D000877 ORTHO05D006099 1.1e-39 166.8 106 71.7
MD17G1042200 Malus domestica HOM05D000877 ORTHO05D006099 1.1e-39 166.8 81 91.4
CDE07G0682 Ceratophyllum demersum HOM05D000877 ORTHO05D006099 1.5e-39 166.4 106 73.6
Glyma.13G068100 Glycine max HOM05D000877 ORTHO05D006099 1.5e-39 166.4 106 72.6
Glyma.19G015900 Glycine max HOM05D000877 ORTHO05D006099 1.5e-39 166.4 106 72.6
Peaxi162Scf00129g00742 Petunia axillaris HOM05D000877 ORTHO05D006099 1.5e-39 166.4 106 70.8
Ciclev10014083m.g Citrus clementina HOM05D000877 ORTHO05D006099 1.9e-39 166.0 81 92.6
Manes.15G179800 Manihot esculenta HOM05D000877 ORTHO05D006099 1.9e-39 166.0 111 71.2
TPR.G32573 Trifolium pratense HOM05D000877 ORTHO05D006099 2.5e-39 165.6 105 72.4
CDE04G3424 Ceratophyllum demersum HOM05D000877 ORTHO05D006099 3.3e-39 165.2 106 72.6
QL02p078595 Quercus lobata HOM05D000877 ORTHO05D006099 4.3e-39 164.9 106 72.6
Thecc.04G066700 Theobroma cacao HOM05D000877 ORTHO05D006099 4.3e-39 164.9 105 74.3
ATR0712G127 Amborella trichopoda HOM05D000877 ORTHO05D006099 5.7e-39 164.5 81 91.4
Aqoxy3G03133 Aquilegia oxysepala HOM05D000877 ORTHO05D006099 7.4e-39 164.1 84 86.9
Lalb_Chr06g0176531 Lupinus albus HOM05D000877 ORTHO05D006099 7.4e-39 164.1 106 71.7
Phvul.004G022500 Phaseolus vulgaris HOM05D000877 ORTHO05D006099 7.4e-39 164.1 106 71.7
arahy.Tifrunner.gnm1.ann1.69HWTH Arachis hypogaea HOM05D000877 ORTHO05D006099 9.7e-39 163.7 81 91.4
CSS0011412 Camellia sinensis var. sinensis HOM05D000877 ORTHO05D006099 9.7e-39 163.7 81 90.1
CSS0034720 Camellia sinensis var. sinensis HOM05D000877 ORTHO05D006099 9.7e-39 163.7 81 90.1
Duzib264G0998 Durio zibethinus HOM05D000877 ORTHO05D006099 9.7e-39 163.7 106 72.6
MBI15_g13304_MAGBIO Magnolia biondii HOM05D000877 ORTHO05D006099 9.7e-39 163.7 81 90.1
Psat1g078760 Pisum sativum HOM05D000877 ORTHO05D006099 9.7e-39 163.7 106 70.8
TWI56G0224 Tripterygium wilfordii HOM05D000877 ORTHO05D006099 9.7e-39 163.7 106 71.7
arahy.Tifrunner.gnm1.ann1.L4IVZW Arachis hypogaea HOM05D000877 ORTHO05D006099 1.3e-38 163.3 81 90.1
Potri.017G073900 Populus trichocarpa HOM05D000877 ORTHO05D006099 1.3e-38 163.3 106 70.8
Gohir.A07G217200 Gossypium hirsutum HOM05D000877 ORTHO05D006099 3.7e-38 161.8 106 70.8
Gohir.D07G224200 Gossypium hirsutum HOM05D000877 ORTHO05D006099 3.7e-38 161.8 106 70.8
Gorai.001G258600 Gossypium raimondii HOM05D000877 ORTHO05D006099 3.7e-38 161.8 106 70.8
Potri.001G350400 Populus trichocarpa HOM05D000877 ORTHO05D006099 3.7e-38 161.8 106 71.7
Sabra16G0229900 Salix brachista HOM05D000877 ORTHO05D006099 3.7e-38 161.8 106 72.6
COL.COLO4_29856 Corchorus olitorius HOM05D000877 ORTHO05D006099 8.2e-38 160.6 106 71.7
Zm00001eb280070 Zea mays HOM05D000877 ORTHO05D006099 8.2e-38 160.6 83 85.5
Zm00001eb371770 Zea mays HOM05D000877 ORTHO05D006099 8.2e-38 160.6 83 85.5
Os06g0245700 Oryza sativa ssp. japonica HOM05D000877 ORTHO05D006099 1.4e-37 159.8 83 85.5
Hund16097 Selenicereus undatus HOM05D000877 ORTHO05D006099 1.4e-37 159.8 96 77.1
Nitab4.5_0007185g0040 Nicotiana tabacum HOM05D000877 ORTHO05D006099 2.4e-37 159.1 78 89.7
HPP92_010829 Vanilla planifolia HOM05D000877 ORTHO05D006099 2.4e-37 159.1 81 86.4
SEGI_10281 Sequoiadendron giganteum HOM05D000877 ORTHO05D006099 1.2e-36 156.8 96 75.0
SEGI_27946 Sequoiadendron giganteum HOM05D000877 ORTHO05D006099 1.2e-36 156.8 96 75.0
Mapoly0060s0008 Marchantia polymorpha HOM05D000877 ORTHO05D006099 1.2e-33 146.7 81 79.0
SHI06805 Sapria himalayana HOM05D000877 ORTHO05D006099 3.6e-33 145.2 86 75.6
Pp3c23_10010 Physcomitrium patens HOM05D000877 ORTHO05D006099 1.8e-32 142.9 106 64.2
SMO174G0078 Selaginella moellendorffii HOM05D000877 ORTHO05D006099 3.3e-31 138.7 83 74.7
SMO196G0126 Selaginella moellendorffii HOM05D000877 ORTHO05D006099 5.7e-31 137.9 78 76.9
AagrBONN_evm.TU.Sc2ySwM_228.1569 Anthoceros agrestis HOM05D000877 ORTHO05D006099 7.4e-31 137.5 90 71.1
CBR_g22451 Chara braunii HOM05D000877 ORTHO05D006099 3.3e-23 112.1 79 59.5
CBR_g55161 Chara braunii HOM05D000877 ORTHO05D006099 1.8e-21 106.3 82 54.9
C03p65800 Brassica napus HOM05D000877 ORTHO05D024021 5.3e-13 78.2 39 87.2
BolC3t18832H Brassica oleracea HOM05D000877 ORTHO05D024021 5.3e-13 78.2 39 87.2


User provided reference genes

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