Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g04196 Brassica carinata HOM05D001038 ORTHO05D000395 7.1e-268 926.8 496 100.0
BcaB05g22095 Brassica carinata HOM05D001038 ORTHO05D016776 2.5e-148 529.6 341 88.0
BraSC37t46126Z Brassica rapa HOM05D001038 ORTHO05D016776 7.4e-124 448.4 505 59.0
C08p22730 Brassica napus HOM05D001038 ORTHO05D016776 1.5e-116 424.1 503 57.1
BcaC08g46850 Brassica carinata HOM05D001038 ORTHO05D000395 3.4e-76 290.0 561 37.6
BolC4t27749H Brassica oleracea HOM05D001038 ORTHO05D016776 5.0e-72 276.2 417 51.8
C04p40300 Brassica napus HOM05D003139 ORTHO05D003540 2.8e-62 243.8 370 52.4
BcaC01g03622 Brassica carinata HOM05D001038 ORTHO05D016776 1.7e-51 208.0 339 49.9
BcaB01g01825 Brassica carinata HOM05D001038 ORTHO05D000395 3.7e-51 206.8 471 37.6
BraA05t21228Z Brassica rapa HOM05D001038 ORTHO05D018589 1.6e-49 201.4 472 32.6
C04p40350 Brassica napus HOM05D001038 ORTHO05D016776 1.3e-48 198.4 386 44.3
A05p23600 Brassica napus HOM05D001038 ORTHO05D018589 3.6e-46 190.3 491 31.4
BcaC07g39263 Brassica carinata HOM05D001038 ORTHO05D016776 1.7e-43 181.4 226 48.7
BcaB03g16464 Brassica carinata HOM05D001038 ORTHO05D018589 6.8e-37 159.5 435 30.6
BcaB04g17690 Brassica carinata HOM05D001038 ORTHO05D018589 1.5e-36 158.3 451 31.3
BolC4t25613H Brassica oleracea HOM05D001038 ORTHO05D016776 2.6e-36 157.5 368 36.7
A03p68060 Brassica napus HOM05D001038 ORTHO05D000395 2.4e-34 151.0 337 33.8
C07p34820 Brassica napus HOM05D001038 ORTHO05D000395 2.4e-34 151.0 491 27.7
A10p08770 Brassica napus HOM05D001038 ORTHO05D016776 3.9e-32 143.7 189 58.2
BcaB06g25472 Brassica carinata HOM05D001038 ORTHO05D010763 1.4e-29 135.2 435 29.0
BolC7t41881H Brassica oleracea HOM05D001038 ORTHO05D000395 6.9e-29 132.9 222 38.7
BcaC02g07854 Brassica carinata HOM05D001038 ORTHO05D090554 2.6e-28 131.0 252 43.3
BolC9t55839H Brassica oleracea HOM05D001038 ORTHO05D016703 2.9e-27 127.5 489 27.4
BcaB05g22891 Brassica carinata HOM05D001038 ORTHO05D010763 7.1e-26 122.9 446 26.0
BraA06t24545Z Brassica rapa HOM05D001038 ORTHO05D024045 9.3e-26 122.5 489 27.0
BolC9t58942H Brassica oleracea HOM05D001038 ORTHO05D010763 1.6e-25 121.7 534 26.6
BolC7t44008H Brassica oleracea HOM05D001038 ORTHO05D000395 7.8e-25 119.4 156 43.6
BcaB07g33328 Brassica carinata HOM05D001038 ORTHO05D010763 5.1e-24 116.7 439 26.0
BcaC08g44172 Brassica carinata HOM05D001038 ORTHO05D018589 1.9e-23 114.8 473 26.8
C05p48930 Brassica napus HOM05D001038 ORTHO05D016716 9.6e-23 112.5 240 36.7
BolC5t33633H Brassica oleracea HOM05D001038 ORTHO05D016716 9.6e-23 112.5 240 36.7
C09p60390 Brassica napus HOM05D001038 ORTHO05D016703 4.8e-22 110.2 497 26.4
BcaC05g24335 Brassica carinata HOM05D001038 ORTHO05D091420 6.2e-22 109.8 69 79.7
BolC4t26248H Brassica oleracea HOM05D001038 ORTHO05D018589 1.8e-21 108.2 402 28.6
A04p22180 Brassica napus HOM05D001038 ORTHO05D000395 3.4e-20 104.0 516 25.8
BraA10t43039Z Brassica rapa HOM05D001038 ORTHO05D000395 4.5e-20 103.6 516 25.8
A10p17410 Brassica napus HOM05D001038 ORTHO05D000395 2.2e-19 101.3 156 40.4
BraA08t34217Z Brassica rapa HOM05D001038 ORTHO05D016716 4.9e-19 100.1 231 36.4
BraA05t19810Z Brassica rapa HOM05D001038 ORTHO05D016703 2.4e-18 97.8 473 26.8
C05p36690 Brassica napus HOM05D001038 ORTHO05D000395 3.2e-18 97.4 153 40.5
BcaC02g09232 Brassica carinata HOM05D003139 ORTHO05D003540 2.1e-17 94.7 281 40.2
BcaC08g44444 Brassica carinata HOM05D001038 ORTHO05D016716 3.5e-17 94.0 444 25.5
C06p18900 Brassica napus HOM05D001038 ORTHO05D016716 6.0e-17 93.2 444 25.7
BolC5t32403H Brassica oleracea HOM05D001038 ORTHO05D016716 3.0e-16 90.9 232 33.2
BcaB05g23893 Brassica carinata HOM05D000015 ORTHO05D001173 7.4e-15 86.3 150 35.3
BcaC05g26744 Brassica carinata HOM05D001038 ORTHO05D000395 3.7e-14 84.0 365 26.6
BcaC02g08100 Brassica carinata HOM05D001038 ORTHO05D018589 8.1e-14 82.8 357 26.6
BcaC03g17929 Brassica carinata HOM05D001038 ORTHO05D000395 8.1e-14 82.8 189 30.7
BolC8t47295H Brassica oleracea HOM05D001038 ORTHO05D000395 6.9e-13 79.7 153 32.7
BraA05t20300Z Brassica rapa HOM05D001038 ORTHO05D000395 6.9e-13 79.7 124 42.7
C04p40310 Brassica napus HOM05D001038 ORTHO05D033058 9.0e-13 79.3 43 86.0
BolC4t25611H Brassica oleracea HOM05D001038 ORTHO05D033058 9.0e-13 79.3 43 86.0
BcaB06g26737 Brassica carinata HOM05D001038 ORTHO05D010763 2.6e-12 77.8 206 27.7
BcaB02g10843 Brassica carinata HOM05D001038 ORTHO05D000395 3.4e-12 77.4 349 24.4
C07p13440 Brassica napus HOM05D001038 ORTHO05D016703 4.5e-12 77.0 441 24.9
BolC7t41839H Brassica oleracea HOM05D001038 ORTHO05D016703 4.5e-12 77.0 441 24.9
BcaC08g43120 Brassica carinata HOM05D001038 ORTHO05D032078 5.8e-12 76.6 123 39.8
C06p03930 Brassica napus HOM05D001038 ORTHO05D000395 5.8e-12 76.6 123 39.8
BcaB03g16061 Brassica carinata HOM05D001038 ORTHO05D000395 7.6e-12 76.3 215 29.3
BcaB06g28131 Brassica carinata HOM05D001038 ORTHO05D000395 2.2e-11 74.7 215 27.4
A01p24490 Brassica napus HOM05D001038 ORTHO05D021947 2.2e-11 74.7 206 27.2
BcaB02g11159 Brassica carinata HOM05D001038 ORTHO05D000395 2.9e-11 74.3 122 37.7
BcaB03g16578 Brassica carinata HOM05D001038 ORTHO05D000395 2.9e-11 74.3 161 31.7
BolC6t36138H Brassica oleracea HOM05D001038 ORTHO05D014932 1.4e-10 72.0 199 27.6
BcaB04g17766 Brassica carinata HOM05D001038 ORTHO05D000395 1.9e-10 71.6 121 34.7
BcaB07g30174 Brassica carinata HOM05D001038 ORTHO05D000395 1.9e-10 71.6 161 31.7
BcaB07g32567 Brassica carinata HOM05D001038 ORTHO05D010763 1.9e-10 71.6 278 28.1
BcaC05g25823 Brassica carinata HOM05D001038 ORTHO05D014932 1.9e-10 71.6 105 37.1
BcaC06g35567 Brassica carinata HOM05D001038 ORTHO05D000395 1.9e-10 71.6 89 46.1
BcaNung00229 Brassica carinata HOM05D001038 ORTHO05D000395 1.9e-10 71.6 145 31.7
BolC2t08169H Brassica oleracea HOM05D001038 ORTHO05D010946 2.4e-10 71.2 176 29.5
BcaB02g06555 Brassica carinata HOM05D001038 ORTHO05D010763 3.2e-10 70.9 297 27.9
BcaB04g17339 Brassica carinata HOM05D001038 ORTHO05D090516 4.2e-10 70.5 364 28.6
BcaNung01360 Brassica carinata HOM05D001038 ORTHO05D010763 4.2e-10 70.5 280 26.8
C09p36260 Brassica napus HOM05D001038 ORTHO05D000395 7.1e-10 69.7 82 46.3
C01p11550 Brassica napus HOM05D001038 ORTHO05D040626 9.3e-10 69.3 136 34.6
BraA09t36747Z Brassica rapa HOM05D001038 ORTHO05D000395 9.3e-10 69.3 155 31.6
BcaB01g00832 Brassica carinata HOM05D001038 ORTHO05D000395 1.2e-09 68.9 108 36.1
BcaB02g10939 Brassica carinata HOM05D001038 ORTHO05D000395 1.2e-09 68.9 123 35.0
Thhalv10009967m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 1.2e-09 68.9 141 31.9
Thhalv10002173m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 1.6e-09 68.6 100 40.0
A09p34780 Brassica napus HOM05D001038 ORTHO05D000395 2.1e-09 68.2 124 31.5
BcaB05g25087 Brassica carinata HOM05D001038 ORTHO05D000395 2.7e-09 67.8 154 29.2
A02p27290 Brassica napus HOM05D001038 ORTHO05D000395 4.6e-09 67.0 155 31.0
BraA02t07755Z Brassica rapa HOM05D001038 ORTHO05D000395 4.6e-09 67.0 155 31.0
BcaB06g26982 Brassica carinata HOM05D001038 ORTHO05D000395 6.0e-09 66.6 151 31.8
BraA06t24005Z Brassica rapa HOM05D001038 ORTHO05D000395 7.9e-09 66.2 119 38.7
BraA09t41072Z Brassica rapa HOM05D001038 ORTHO05D000395 7.9e-09 66.2 491 22.6
BcaB08g34782 Brassica carinata HOM05D001038 ORTHO05D000395 1.0e-08 65.9 365 23.8
BcaC05g24336 Brassica carinata HOM05D001038 ORTHO05D016776 1.0e-08 65.9 74 52.7
Thhalv10029129m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 1.0e-08 65.9 277 25.6
BcaB06g26720 Brassica carinata HOM05D001038 ORTHO05D000395 1.3e-08 65.5 93 35.5
BolC7t41164H Brassica oleracea HOM05D001038 ORTHO05D000395 1.3e-08 65.5 454 24.9
BcaB01g01303 Brassica carinata HOM05D001038 ORTHO05D000395 1.8e-08 65.1 120 35.0
BcaB06g27965 Brassica carinata HOM05D001038 ORTHO05D000395 1.8e-08 65.1 93 35.5
BcaC03g15415 Brassica carinata HOM05D001038 ORTHO05D000395 1.8e-08 65.1 158 28.5
BcaNung00468 Brassica carinata HOM05D001038 ORTHO05D000395 2.3e-08 64.7 300 24.7
A01p23200 Brassica napus HOM05D001038 ORTHO05D000395 2.3e-08 64.7 96 34.4
BcaB06g28161 Brassica carinata HOM05D001038 ORTHO05D000395 3.0e-08 64.3 372 25.0
BcaC04g20563 Brassica carinata HOM05D001038 ORTHO05D021947 3.0e-08 64.3 328 24.4
BcaC06g35484 Brassica carinata HOM05D001038 ORTHO05D000395 3.0e-08 64.3 332 23.2
BolC2t09973H Brassica oleracea HOM05D001038 ORTHO05D021697 3.0e-08 64.3 71 42.3
BcaC04g23074 Brassica carinata HOM05D001038 ORTHO05D019962 6.7e-08 63.2 151 28.5
A03p31860 Brassica napus HOM05D001038 ORTHO05D024045 6.7e-08 63.2 216 29.6
A03p51100 Brassica napus HOM05D001038 ORTHO05D024045 6.7e-08 63.2 216 29.6
C09p42070 Brassica napus HOM05D001038 ORTHO05D021947 6.7e-08 63.2 328 24.4
BcaB08g35144 Brassica carinata HOM05D001038 ORTHO05D021599 8.7e-08 62.8 470 22.6
BraA07t28383Z Brassica rapa HOM05D001038 ORTHO05D032078 8.7e-08 62.8 106 39.6
C02p52080 Brassica napus HOM05D001038 ORTHO05D019962 2.5e-07 61.2 154 29.2
BcaB01g01601 Brassica carinata HOM05D001038 ORTHO05D090378 3.3e-07 60.8 159 32.7
BraA04t16494Z Brassica rapa HOM05D001038 ORTHO05D021947 3.3e-07 60.8 312 24.4
BraA05t21706Z Brassica rapa HOM05D001038 ORTHO05D019929 3.3e-07 60.8 148 30.4
BcaC08g46980 Brassica carinata HOM05D001038 ORTHO05D000395 4.3e-07 60.5 154 27.3
BcaC09g51573 Brassica carinata HOM05D001038 ORTHO05D000395 4.3e-07 60.5 132 34.8
C07p07480 Brassica napus HOM05D001038 ORTHO05D000395 4.3e-07 60.5 142 33.1
BolC1t03990H Brassica oleracea HOM05D001038 ORTHO05D000395 5.6e-07 60.1 74 37.8
C06p38180 Brassica napus HOM05D001038 ORTHO05D000395 7.4e-07 59.7 333 23.1
BcaB08g34565 Brassica carinata HOM05D001038 ORTHO05D000395 9.6e-07 59.3 88 37.5
BcaB01g01915 Brassica carinata HOM05D001038 ORTHO05D000395 1.3e-06 58.9 163 28.2
BcaC05g28246 Brassica carinata HOM05D001038 ORTHO05D031796 1.3e-06 58.9 141 30.5
A01p01820 Brassica napus HOM05D001038 ORTHO05D000395 1.6e-06 58.5 98 35.7
A02p12560 Brassica napus HOM05D001038 ORTHO05D019929 2.1e-06 58.2 148 29.7
C07p11760 Brassica napus HOM05D001038 ORTHO05D024045 2.1e-06 58.2 251 26.3
C09p37880 Brassica napus HOM05D001038 ORTHO05D000395 2.1e-06 58.2 246 27.6
BolC7t42043H Brassica oleracea HOM05D001038 ORTHO05D000395 2.1e-06 58.2 321 23.1
BolC9t56621H Brassica oleracea HOM05D001038 ORTHO05D000395 2.1e-06 58.2 246 27.6
BraA10t43452Z Brassica rapa HOM05D001038 ORTHO05D019929 2.1e-06 58.2 148 29.7
Thhalv10002771m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 2.1e-06 58.2 83 36.1
BcaC07g37762 Brassica carinata HOM05D001038 ORTHO05D000395 2.8e-06 57.8 124 29.0
A01p38280 Brassica napus HOM05D001038 ORTHO05D000395 2.8e-06 57.8 90 37.8
C08p05950 Brassica napus HOM05D001038 ORTHO05D000395 2.8e-06 57.8 124 33.9
BolC8t48147H Brassica oleracea HOM05D001038 ORTHO05D000395 2.8e-06 57.8 124 29.0
BcaC01g03929 Brassica carinata HOM05D001038 ORTHO05D010946 3.7e-06 57.4 84 35.7
BolC6t38914H Brassica oleracea HOM05D001038 ORTHO05D000395 3.7e-06 57.4 124 29.0
BcaB08g34843 Brassica carinata HOM05D001038 ORTHO05D010946 4.8e-06 57.0 84 34.5
C06p10570 Brassica napus HOM05D001038 ORTHO05D014932 4.8e-06 57.0 102 35.3
C07p15560 Brassica napus HOM05D001038 ORTHO05D000395 4.8e-06 57.0 287 23.3
BolC2t11293H Brassica oleracea HOM05D001038 ORTHO05D019962 4.8e-06 57.0 346 23.7
C09p22250 Brassica napus HOM05D001038 ORTHO05D000395 6.2e-06 56.6 138 31.9
BcaB03g16260 Brassica carinata HOM05D001038 ORTHO05D019962 8.2e-06 56.2 204 25.0
BcaB07g31666 Brassica carinata HOM05D001038 ORTHO05D000395 8.2e-06 56.2 78 33.3


User provided reference genes

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