Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g02929 Brassica carinata HOM05D004653 ORTHO05D006221 5.2e-306 1053.5 519 100.0
BraA03t11972Z Brassica rapa HOM05D004653 ORTHO05D006221 3.1e-274 948.0 527 90.9
A03p27590 Brassica napus HOM05D004653 ORTHO05D006221 5.3e-274 947.2 527 91.1
BcaC01g04840 Brassica carinata HOM05D004653 ORTHO05D006221 2.1e-270 935.3 520 90.6
BolC3t15652H Brassica oleracea HOM05D004653 ORTHO05D006221 1.1e-268 929.5 520 90.2
C03p33300 Brassica napus HOM05D004653 ORTHO05D006221 2.5e-268 928.3 520 90.0
Sp6g11760 Schrenkiella parvula HOM05D004653 ORTHO05D006221 9.7e-268 926.4 527 89.0
Thhalv10013217m.g Eutrema salsugineum HOM05D004653 ORTHO05D006221 2.4e-266 921.8 536 87.5
Carub.0008s0987 Capsella rubella HOM05D004653 ORTHO05D006221 8.5e-256 886.7 542 83.0
CARHR258740 Cardamine hirsuta HOM05D004653 ORTHO05D006221 1.1e-255 886.3 528 84.8
AT5G49970 Arabidopsis thaliana HOM05D004653 ORTHO05D006221 5.5e-255 884.0 538 84.2
AL8G23940 Arabidopsis lyrata HOM05D004653 ORTHO05D006221 3.9e-253 877.9 543 83.4
THA.LOC104799811 Tarenaya hassleriana HOM05D004653 ORTHO05D006221 2.5e-239 832.0 528 78.2
Aa31sc34G110 Aethionema arabicum HOM05D004653 ORTHO05D006221 2.7e-238 828.6 543 77.9
COL.COLO4_11961 Corchorus olitorius HOM05D004653 ORTHO05D006221 2.0e-220 769.2 510 72.7
Cfa013708 Carpinus fangiana HOM05D004653 ORTHO05D006221 1.1e-218 763.5 460 78.9
Lj1g0013887 Lotus japonicus HOM05D004653 ORTHO05D006221 1.4e-218 763.1 539 69.6
Ciclev10000790m.g Citrus clementina HOM05D004653 ORTHO05D006221 5.4e-218 761.1 464 78.4
Atru.chr13.1058 Acer truncatum HOM05D004653 ORTHO05D006221 1.6e-217 759.6 469 77.6
arahy.Tifrunner.gnm1.ann1.QAT0QL Arachis hypogaea HOM05D004653 ORTHO05D006221 3.5e-217 758.4 518 70.8
Gorai.009G279800 Gossypium raimondii HOM05D004653 ORTHO05D006221 3.5e-217 758.4 465 76.8
MBI06_g18790_MAGBIO Magnolia biondii HOM05D004653 ORTHO05D006221 7.8e-217 757.3 489 74.0
Medtr3g100890 Medicago truncatula HOM05D004653 ORTHO05D006221 3.9e-216 755.0 544 69.1
PSO541G1602 Papaver somniferum HOM05D004653 ORTHO05D006221 3.9e-216 755.0 469 76.8
CiPaw.07G169200 Carya illinoinensis HOM05D004653 ORTHO05D006221 8.6e-216 753.8 466 76.0
PSO675G8871 Papaver somniferum HOM05D004653 ORTHO05D006221 1.5e-215 753.1 517 71.6
Cpa.g.sc36.204 Carica papaya HOM05D004653 ORTHO05D006221 4.3e-215 751.5 452 79.4
GSVIVG01009125001 Vitis vinifera HOM05D004653 ORTHO05D006221 5.6e-215 751.1 478 74.5
FAN18G1441 Fragaria x ananassa HOM05D004653 ORTHO05D006221 1.2e-214 750.0 539 69.0
FAN04G0673 Fragaria x ananassa HOM05D004653 ORTHO05D006221 2.1e-214 749.2 536 68.8
FvH4_5g35940 Fragaria vesca HOM05D004653 ORTHO05D006221 3.6e-214 748.4 539 68.8
TAR376G1013 Trochodendron aralioides HOM05D004653 ORTHO05D006221 3.6e-214 748.4 542 68.6
Gohir.D05G267700 Gossypium hirsutum HOM05D004653 ORTHO05D006221 4.7e-214 748.0 520 70.0
Phvul.009G037700 Phaseolus vulgaris HOM05D004653 ORTHO05D006221 4.7e-214 748.0 460 76.7
Prupe.1G526800 Prunus persica HOM05D004653 ORTHO05D006221 4.7e-214 748.0 469 76.1
FAN08G1395 Fragaria x ananassa HOM05D004653 ORTHO05D006221 6.2e-214 747.7 539 68.6
Psat5g045400 Pisum sativum HOM05D004653 ORTHO05D006221 6.2e-214 747.7 508 71.7
Thecc.08G066400 Theobroma cacao HOM05D004653 ORTHO05D006221 6.2e-214 747.7 465 75.9
Nn1g05497 Nelumbo nucifera HOM05D004653 ORTHO05D006221 8.0e-214 747.3 476 75.2
TPR.G26053 Trifolium pratense HOM05D004653 ORTHO05D006221 8.0e-214 747.3 485 73.6
Migut.I00061 Erythranthe guttata HOM05D004653 ORTHO05D006221 1.4e-213 746.5 479 74.3
Ciclev10001057m.g Citrus clementina HOM05D004653 ORTHO05D006221 2.3e-213 745.7 464 76.9
MD15G1380600 Malus domestica HOM05D004653 ORTHO05D006221 3.1e-213 745.3 472 75.4
Potri.002G102600 Populus trichocarpa HOM05D004653 ORTHO05D006221 3.1e-213 745.3 465 75.5
QL09p016947 Quercus lobata HOM05D004653 ORTHO05D006221 3.1e-213 745.3 488 73.2
RcHm_v2.0_Chr7g0237681 Rosa chinensis HOM05D004653 ORTHO05D006221 5.2e-213 744.6 539 68.3
CANSAT11G2183 Cannabis sativa HOM05D004653 ORTHO05D006221 2.0e-212 742.7 476 75.6
TWI56G0982 Tripterygium wilfordii HOM05D004653 ORTHO05D006221 2.0e-212 742.7 542 68.3
CDE05G0914 Ceratophyllum demersum HOM05D004653 ORTHO05D006221 3.4e-212 741.9 475 75.4
MD08G1191800 Malus domestica HOM05D004653 ORTHO05D006221 5.8e-212 741.1 546 68.5
VMungo1309G1466 Vigna mungo HOM05D004653 ORTHO05D006221 9.8e-212 740.3 476 74.4
Actinidia30803 Actinidia chinensis HOM05D004653 ORTHO05D006221 1.3e-211 740.0 541 68.0
Hma1.2p1_0961F.1_g241730 Hydrangea macrophylla HOM05D004653 ORTHO05D006221 1.3e-211 740.0 469 74.2
PGSC0003DMG401024581 Solanum tuberosum HOM05D004653 ORTHO05D006221 1.3e-211 740.0 489 71.4
SGA_v2.0_scaffold25G10868 Striga asiatica HOM05D004653 ORTHO05D006221 2.9e-211 738.8 470 74.7
CSS0037453 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 6.4e-211 737.6 495 70.1
SalBow5G1317 Salvia bowleyana HOM05D004653 ORTHO05D006221 6.4e-211 737.6 477 73.4
MELO3C003541.2 Cucumis melo HOM05D004653 ORTHO05D006221 1.4e-210 736.5 479 74.3
Aqoxy6G01474 Aquilegia oxysepala HOM05D004653 ORTHO05D006221 1.9e-210 736.1 472 75.4
Lalb_Chr23g0270281 Lupinus albus HOM05D004653 ORTHO05D006221 4.1e-210 734.9 460 74.8
Solyc03g113780.3 Solanum lycopersicum HOM05D004653 ORTHO05D006221 4.1e-210 734.9 530 66.8
PGR031G0949 Punica granatum HOM05D004653 ORTHO05D006221 5.4e-210 734.6 527 70.6
Ca_15984_v3 Cicer arietinum L. HOM05D004653 ORTHO05D006221 7.0e-210 734.2 463 74.3
Lalb_Chr11g0065151 Lupinus albus HOM05D004653 ORTHO05D006221 9.2e-210 733.8 460 74.6
Manes.02G147500 Manihot esculenta HOM05D004653 ORTHO05D006221 1.2e-209 733.4 472 73.3
Sed0021217 Sechium edule HOM05D004653 ORTHO05D006221 2.0e-209 732.6 542 67.7
Sopen03g032830 Solanum pennellii HOM05D004653 ORTHO05D006221 2.7e-209 732.3 502 68.9
ClCG11G014410 Citrullus lanatus HOM05D004653 ORTHO05D006221 4.6e-209 731.5 530 68.3
Eucgr.F02123 Eucalyptus grandis HOM05D004653 ORTHO05D006221 4.6e-209 731.5 548 67.5
Haze_22352 Corylus avellana HOM05D004653 ORTHO05D006221 6.0e-209 731.1 538 67.7
Manes.18G062000 Manihot esculenta HOM05D004653 ORTHO05D006221 6.0e-209 731.1 479 73.1
MSTRG.23086 Avicennia marina HOM05D004653 ORTHO05D006221 2.3e-208 729.2 469 73.8
CsaV3_3G047810 Cucumis sativus L. HOM05D004653 ORTHO05D006221 4.3e-207 724.9 465 74.2
Hund26999 Selenicereus undatus HOM05D004653 ORTHO05D006221 4.3e-207 724.9 499 71.1
FAN13G0646 Fragaria x ananassa HOM05D004653 ORTHO05D006221 7.3e-207 724.2 470 72.6
Lj4C92G16 Lonicera japonica HOM05D004653 ORTHO05D006221 9.5e-207 723.8 469 73.1
arahy.Tifrunner.gnm1.ann1.Y1WP0G Arachis hypogaea HOM05D004653 ORTHO05D006221 6.2e-206 721.1 518 68.7
CAN.G853.18 Capsicum annuum HOM05D004653 ORTHO05D006221 1.4e-205 719.9 496 69.2
Os10g0377800 Oryza sativa ssp. japonica HOM05D004653 ORTHO05D006221 1.4e-205 719.9 458 74.7
CSS0025013 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 3.1e-205 718.8 460 73.3
HanXRQChr02g0047071 Helianthus annuus HOM05D004653 ORTHO05D006221 5.2e-205 718.0 475 71.4
TAR628G1442 Trochodendron aralioides HOM05D004653 ORTHO05D006221 6.8e-205 717.6 469 72.9
TWI36G0595 Tripterygium wilfordii HOM05D004653 ORTHO05D006221 4.4e-204 714.9 465 74.0
AUR62019003 Chenopodium quinoa HOM05D004653 ORTHO05D006221 3.2e-202 708.8 479 72.2
AUR62027845 Chenopodium quinoa HOM05D004653 ORTHO05D006221 4.1e-202 708.4 479 72.2
ATR0022G001 Amborella trichopoda HOM05D004653 ORTHO05D006221 7.1e-202 707.6 465 71.2
EL10Ac1g01097 Beta vulgaris HOM05D004653 ORTHO05D006221 9.2e-202 707.2 447 75.2
Gohir.A05G265600 Gossypium hirsutum HOM05D004653 ORTHO05D006221 6.6e-200 701.0 513 67.4
Rhsim06G0074900 Rhododendron simsii HOM05D004653 ORTHO05D006221 8.6e-200 700.7 477 69.8
Sabra02G0080400 Salix brachista HOM05D004653 ORTHO05D006221 2.5e-199 699.1 619 59.5
ECA247G2604 Erigeron canadensis HOM05D004653 ORTHO05D006221 4.7e-198 694.9 457 71.1
HPP92_004087 Vanilla planifolia HOM05D004653 ORTHO05D006221 4.0e-197 691.8 465 71.2
Lsat_1_v5_gn_1_2401 Lactuca sativa HOM05D004653 ORTHO05D006221 2.0e-196 689.5 498 66.1
HPP92_004102 Vanilla planifolia HOM05D004653 ORTHO05D006221 7.6e-196 687.6 465 70.8
vmacro22331 Vaccinium macrocarpon HOM05D004653 ORTHO05D006221 6.4e-195 684.5 602 59.0
DCAR_012873 Daucus carota HOM05D004653 ORTHO05D006221 1.9e-194 682.9 488 66.8
Glyma.04G093600 Glycine max HOM05D004653 ORTHO05D006221 1.2e-190 670.2 410 77.3
Cc04_g13590 Coffea canephora HOM05D004653 ORTHO05D006221 3.6e-190 668.7 436 72.2
Nitab4.5_0000642g0300 Nicotiana tabacum HOM05D004653 ORTHO05D006221 6.2e-190 667.9 513 64.7
Sc01g0000970 Simmondsia chinensis HOM05D004653 ORTHO05D006221 1.9e-186 656.4 421 73.2
Sc01g0000980 Simmondsia chinensis HOM05D004653 ORTHO05D006221 5.4e-186 654.8 421 73.2
unitig_26.g9628 Utricularia gibba HOM05D004653 ORTHO05D006221 1.3e-184 650.2 458 67.5
Dinv44830 Davidia involucrata HOM05D004653 ORTHO05D006221 2.2e-179 632.9 415 73.5
Mapoly0107s0030 Marchantia polymorpha HOM05D004653 ORTHO05D006221 2.9e-179 632.5 465 64.9
MBI02_g18292_MAGBIO Magnolia biondii HOM05D004653 ORTHO05D006221 8.4e-179 630.9 464 64.4
Oeu042971.1 Olea europaea HOM05D004653 ORTHO05D006221 1.7e-176 623.2 442 66.1
SMO356G0546 Selaginella moellendorffii HOM05D004653 ORTHO05D006221 3.3e-175 619.0 448 64.1
CAN.G853.20 Capsicum annuum HOM05D004653 ORTHO05D006221 9.0e-173 610.9 464 62.1
Oeu042973.1 Olea europaea HOM05D004653 ORTHO05D006221 1.2e-172 610.5 421 67.7
Pp3c2_19610 Physcomitrium patens HOM05D004653 ORTHO05D006221 3.4e-172 609.0 463 62.4
Cc07_g19270 Coffea canephora HOM05D004653 ORTHO05D006221 9.9e-172 607.4 447 65.1
Sopen03g032820 Solanum pennellii HOM05D004653 ORTHO05D006221 1.1e-167 594.0 464 61.2
Solyc03g113770.3 Solanum lycopersicum HOM05D004653 ORTHO05D006221 1.4e-165 587.0 464 60.6
Migut.I00062 Erythranthe guttata HOM05D004653 ORTHO05D006221 7.1e-162 574.7 457 59.7
SGA_v2.0_scaffold467G52033 Striga asiatica HOM05D004653 ORTHO05D006221 1.2e-161 573.9 449 61.7
Nitab4.5_0007586g0050 Nicotiana tabacum HOM05D004653 ORTHO05D006221 2.5e-159 566.2 476 59.2
CSS0007986 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 7.4e-159 564.7 347 75.8
SalBow5G2478 Salvia bowleyana HOM05D004653 ORTHO05D006221 2.1e-158 563.1 452 59.3
Oeu018527.2 Olea europaea HOM05D004653 ORTHO05D006221 1.5e-156 557.0 466 61.6
AagrBONN_evm.TU.Sc2ySwM_368.1227 Anthoceros agrestis HOM05D004653 ORTHO05D006221 4.2e-154 548.9 452 58.8
Peaxi162Scf00017g00233 Petunia axillaris HOM05D004653 ORTHO05D006221 2.1e-153 546.6 379 68.1
MSTRG.23084 Avicennia marina HOM05D004653 ORTHO05D006221 2.1e-137 493.4 352 66.8
Nitab4.5_0024258g0010 Nicotiana tabacum HOM05D004653 ORTHO05D006221 5.7e-135 485.3 323 70.9
Cre08.g378200 Chlamydomonas reinhardtii HOM05D004653 ORTHO05D006221 1.5e-127 460.7 495 50.7
Zm00001eb027880 Zea mays HOM05D004653 ORTHO05D006221 7.0e-117 425.2 271 74.2
MBI17_g06166_MAGBIO Magnolia biondii HOM05D004653 ORTHO05D006221 1.4e-112 411.0 316 65.5
Lalb_Chr23g0270171 Lupinus albus HOM05D004653 ORTHO05D006221 1.5e-111 407.5 255 73.7
PGSC0003DMG400024580 Solanum tuberosum HOM05D004653 ORTHO05D006221 3.5e-108 396.4 421 48.0
CSS0017284 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 1.7e-99 367.5 261 66.3
Actinidia10360 Actinidia chinensis HOM05D004653 ORTHO05D006221 4.1e-93 346.3 368 54.1
CBR_g24311 Chara braunii HOM05D000019 ORTHO05D000353 1.2e-89 334.7 262 58.4
Glyma.06G095500 Glycine max HOM05D004653 ORTHO05D006221 6.8e-88 328.9 274 64.2
SEGI_17033 Sequoiadendron giganteum HOM05D004653 ORTHO05D006221 7.3e-82 308.9 214 64.0
MCO02G367 Micromonas commoda HOM05D004653 ORTHO05D006221 3.1e-80 303.5 233 60.9
Duzib116G0761 Durio zibethinus HOM05D004653 ORTHO05D006221 2.1e-65 254.2 176 71.6
CBR_g24313 Chara braunii HOM05D004653 ORTHO05D006221 8.4e-54 215.7 162 63.6
Lalb_Chr23g0270161 Lupinus albus HOM05D004653 ORTHO05D006221 4.0e-48 196.8 144 66.0
Cc06_g21090 Coffea canephora HOM05D004653 ORTHO05D006221 5.9e-39 166.4 100 82.0
Nitab4.5_0005655g0030 Nicotiana tabacum HOM05D004653 ORTHO05D006221 2.5e-37 161.0 113 67.3
Dinv42645 Davidia involucrata HOM05D004653 ORTHO05D006221 3.2e-37 160.6 183 49.7
Glyma.06G095451 Glycine max HOM05D004653 ORTHO05D006221 4.6e-36 156.8 178 50.6
SEGI_12419 Sequoiadendron giganteum HOM05D004653 ORTHO05D006221 2.3e-35 154.5 91 74.7
Potri.005G159500 Populus trichocarpa HOM05D004653 ORTHO05D006221 1.4e-29 135.2 114 57.9
CSS0010132 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D006221 3.9e-27 127.1 129 50.4
PRCOL_00006962 Prasinoderma coloniale HOM05D004653 ORTHO05D006221 7.0e-16 89.7 57 63.2
Dinv42644 Davidia involucrata HOM05D004653 ORTHO05D006221 5.9e-15 86.7 111 46.8
BcaB08g35370 Brassica carinata HOM05D004653 ORTHO05D006221 1.5e-13 82.0 57 73.7
Gohir.A06G032660 Gossypium hirsutum HOM05D004653 ORTHO05D019566 1.9e-13 81.6 48 83.3
Gorai.010G036500 Gossypium raimondii HOM05D004653 ORTHO05D019566 1.9e-13 81.6 48 83.3
Lalb_Chr23g0270181 Lupinus albus HOM05D004653 ORTHO05D019566 4.7e-12 77.0 57 71.9
CSS0005277 Camellia sinensis var. sinensis HOM05D004653 ORTHO05D019566 4.1e-08 63.9 65 56.9


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