Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g02419 Brassica carinata HOM05D001038 ORTHO05D018639 3.8e-34 147.5 70 100.0
BcaB01g03119 Brassica carinata HOM05D001038 ORTHO05D018639 2.2e-29 131.7 70 91.4
BolC3t16999H Brassica oleracea HOM05D001038 ORTHO05D018639 3.4e-19 97.8 63 74.6
BcaC08g46850 Brassica carinata HOM05D001038 ORTHO05D000395 7.7e-19 96.7 63 73.0
BraSC37t46126Z Brassica rapa HOM05D001038 ORTHO05D016776 1.3e-18 95.9 63 73.0
BraA04t16612Z Brassica rapa HOM05D001038 ORTHO05D018639 1.7e-18 95.5 63 73.0
C08p22730 Brassica napus HOM05D001038 ORTHO05D016776 5.0e-18 94.0 60 75.0
A07p11770 Brassica napus HOM05D001038 ORTHO05D018639 6.5e-18 93.6 62 71.0
BraA07t28962Z Brassica rapa HOM05D001038 ORTHO05D018639 6.5e-18 93.6 62 71.0
BcaB06g28671 Brassica carinata HOM05D001038 ORTHO05D018639 8.5e-18 93.2 63 69.8
BcaC06g32026 Brassica carinata HOM05D001038 ORTHO05D000395 1.4e-17 92.4 63 71.4
C08p27920 Brassica napus HOM05D001038 ORTHO05D018639 1.6e-16 89.0 60 70.0
BraA07t29115Z Brassica rapa HOM05D001038 ORTHO05D000395 4.8e-13 77.4 63 61.9
BolC6t36762H Brassica oleracea HOM05D001038 ORTHO05D000395 1.4e-12 75.9 62 59.7
BraA05t19810Z Brassica rapa HOM05D001038 ORTHO05D016703 2.4e-12 75.1 56 60.7
A06p28660 Brassica napus HOM05D001038 ORTHO05D000395 7.0e-12 73.6 63 54.0
BraA06t25806Z Brassica rapa HOM05D001038 ORTHO05D000395 7.0e-12 73.6 63 54.0
A04p22180 Brassica napus HOM05D001038 ORTHO05D000395 9.1e-12 73.2 63 55.6
BraA10t43039Z Brassica rapa HOM05D001038 ORTHO05D000395 9.1e-12 73.2 63 55.6
C07p13440 Brassica napus HOM05D001038 ORTHO05D016703 2.0e-11 72.0 56 58.9
BolC7t41839H Brassica oleracea HOM05D001038 ORTHO05D016703 2.0e-11 72.0 56 58.9
A05p23600 Brassica napus HOM05D001038 ORTHO05D018589 2.6e-11 71.6 56 62.5
BolC7t41662H Brassica oleracea HOM05D001038 ORTHO05D031981 2.6e-11 71.6 51 60.8
BraA05t21228Z Brassica rapa HOM05D001038 ORTHO05D018589 2.6e-11 71.6 56 62.5
A01p38280 Brassica napus HOM05D001038 ORTHO05D000395 4.5e-11 70.9 53 58.5
BolC7t44009H Brassica oleracea HOM05D001038 ORTHO05D024484 4.5e-11 70.9 54 57.4
BraA08t34217Z Brassica rapa HOM05D001038 ORTHO05D016716 4.5e-11 70.9 55 58.2
BraA09t41072Z Brassica rapa HOM05D001038 ORTHO05D000395 4.5e-11 70.9 53 58.5
A06p26760 Brassica napus HOM05D001038 ORTHO05D000395 5.9e-11 70.5 56 55.4
BraA04t18197Z Brassica rapa HOM05D001038 ORTHO05D000395 5.9e-11 70.5 52 61.5
C09p60390 Brassica napus HOM05D001038 ORTHO05D016703 1.0e-10 69.7 56 53.6
BolC7t41881H Brassica oleracea HOM05D001038 ORTHO05D000395 1.0e-10 69.7 63 54.0
BolC7t43509H Brassica oleracea HOM05D001038 ORTHO05D000395 1.3e-10 69.3 63 54.0
BcaB06g26608 Brassica carinata HOM05D001038 ORTHO05D000395 2.9e-10 68.2 38 78.9
A04p08290 Brassica napus HOM05D001038 ORTHO05D024484 2.9e-10 68.2 54 57.4
BolC4t27362H Brassica oleracea HOM05D001038 ORTHO05D000395 3.8e-10 67.8 56 64.3
BcaB01g01350 Brassica carinata HOM05D001038 ORTHO05D000395 5.0e-10 67.4 50 58.0
BcaB07g32736 Brassica carinata HOM05D001038 ORTHO05D024484 5.0e-10 67.4 54 61.1
BolC2t07185H Brassica oleracea HOM05D001038 ORTHO05D000395 1.1e-09 66.2 47 63.8
BraA04t17286Z Brassica rapa HOM05D001038 ORTHO05D021830 1.9e-09 65.5 47 63.8
BcaC09g51594 Brassica carinata HOM05D001038 ORTHO05D021830 3.2e-09 64.7 50 60.0
C01p11670 Brassica napus HOM05D001038 ORTHO05D021830 3.2e-09 64.7 50 60.0
C05p36690 Brassica napus HOM05D001038 ORTHO05D000395 3.2e-09 64.7 55 54.5
BolC1t01131H Brassica oleracea HOM05D001038 ORTHO05D021830 3.2e-09 64.7 50 60.0
BolC5t32403H Brassica oleracea HOM05D001038 ORTHO05D016716 3.2e-09 64.7 55 54.5
BraA04t18267Z Brassica rapa HOM05D001038 ORTHO05D021830 4.2e-09 64.3 47 63.8
BolC7t41648H Brassica oleracea HOM05D001038 ORTHO05D000395 7.2e-09 63.5 63 50.8
BolC8t49550H Brassica oleracea HOM05D001038 ORTHO05D000395 7.2e-09 63.5 47 59.6
BraA02t06821Z Brassica rapa HOM05D001038 ORTHO05D000395 7.2e-09 63.5 51 49.0
BcaB01g02362 Brassica carinata HOM05D001038 ORTHO05D000395 9.4e-09 63.2 50 50.0
BolC5t33633H Brassica oleracea HOM05D001038 ORTHO05D016716 9.4e-09 63.2 55 52.7
BraA06t24005Z Brassica rapa HOM05D001038 ORTHO05D000395 9.4e-09 63.2 47 59.6
A05p15580 Brassica napus HOM05D001038 ORTHO05D024484 2.1e-08 62.0 54 51.9
A07p30050 Brassica napus HOM05D001038 ORTHO05D000395 2.1e-08 62.0 47 57.4
BraA05t20474Z Brassica rapa HOM05D001038 ORTHO05D024484 2.1e-08 62.0 54 51.9
BcaC06g35714 Brassica carinata HOM05D001038 ORTHO05D000395 3.6e-08 61.2 44 61.4
BcaNung00284 Brassica carinata HOM05D001038 ORTHO05D000395 3.6e-08 61.2 60 46.7
C07p11750 Brassica napus HOM05D001038 ORTHO05D000395 3.6e-08 61.2 44 61.4
BolC8t47295H Brassica oleracea HOM05D001038 ORTHO05D000395 3.6e-08 61.2 47 61.7
C09p37880 Brassica napus HOM05D001038 ORTHO05D000395 4.7e-08 60.8 51 47.1
BolC3t15766H Brassica oleracea HOM05D001038 ORTHO05D040320 4.7e-08 60.8 63 46.0
BolC9t56621H Brassica oleracea HOM05D001038 ORTHO05D000395 4.7e-08 60.8 51 47.1
C03p34550 Brassica napus HOM05D001038 ORTHO05D040320 6.1e-08 60.5 50 54.0
A09p58370 Brassica napus HOM05D001038 ORTHO05D000395 8.0e-08 60.1 51 52.9
C07p12210 Brassica napus HOM05D001038 ORTHO05D040877 8.0e-08 60.1 59 44.1
BolC4t24024H Brassica oleracea HOM05D001038 ORTHO05D000395 1.0e-07 59.7 51 56.9
C04p42380 Brassica napus HOM05D001038 ORTHO05D000395 1.4e-07 59.3 48 54.2
C06p00860 Brassica napus HOM05D001038 ORTHO05D000395 2.3e-07 58.5 51 51.0
BolC3t16968H Brassica oleracea HOM05D001038 ORTHO05D000395 2.3e-07 58.5 51 51.0
BcaNung02282 Brassica carinata HOM05D001038 ORTHO05D000395 3.0e-07 58.2 50 50.0
BolC2t11144H Brassica oleracea HOM05D001038 ORTHO05D040877 3.0e-07 58.2 59 42.4
BolC7t44786H Brassica oleracea HOM05D001038 ORTHO05D000395 3.0e-07 58.2 50 50.0
C01p43390 Brassica napus HOM05D001038 ORTHO05D024222 4.0e-07 57.8 56 50.0
BolC7t41688H Brassica oleracea HOM05D001038 ORTHO05D000395 4.0e-07 57.8 59 40.7
C07p07480 Brassica napus HOM05D001038 ORTHO05D000395 5.2e-07 57.4 51 45.1
C09p68940 Brassica napus HOM05D001038 ORTHO05D000395 5.2e-07 57.4 50 50.0
BolC3t20321H Brassica oleracea HOM05D001038 ORTHO05D000395 5.2e-07 57.4 51 49.0
BolC7t41164H Brassica oleracea HOM05D001038 ORTHO05D000395 5.2e-07 57.4 51 45.1
BolC7t42338H Brassica oleracea HOM05D001038 ORTHO05D000395 5.2e-07 57.4 54 42.6
BcaB08g36368 Brassica carinata HOM05D001038 ORTHO05D000395 6.7e-07 57.0 58 46.6
BcaC09g49024 Brassica carinata HOM05D001038 ORTHO05D000395 6.7e-07 57.0 53 50.9
A02p12570 Brassica napus HOM05D001038 ORTHO05D000395 6.7e-07 57.0 60 46.7
C07p18280 Brassica napus HOM05D001038 ORTHO05D000395 6.7e-07 57.0 54 42.6
BcaB04g17766 Brassica carinata HOM05D001038 ORTHO05D000395 8.8e-07 56.6 51 54.9
BcaNung00229 Brassica carinata HOM05D001038 ORTHO05D000395 8.8e-07 56.6 51 54.9
BraA08t34502Z Brassica rapa HOM05D001038 ORTHO05D000395 8.8e-07 56.6 56 50.0
BcaC01g04980 Brassica carinata HOM05D001038 ORTHO05D000395 1.2e-06 56.2 50 46.0
BolC1t03990H Brassica oleracea HOM05D001038 ORTHO05D000395 1.5e-06 55.8 50 50.0
BolC5t30492H Brassica oleracea HOM05D001038 ORTHO05D000395 1.5e-06 55.8 51 51.0
A01p23200 Brassica napus HOM05D001038 ORTHO05D000395 2.0e-06 55.5 51 49.0
BcaB03g12379 Brassica carinata HOM05D001038 ORTHO05D000395 2.6e-06 55.1 54 48.1
BcaB06g26021 Brassica carinata HOM05D001038 ORTHO05D000395 2.6e-06 55.1 51 51.0
BNapus_Darmor_BZH_scaffold_38p02600 Brassica napus HOM05D001038 ORTHO05D000395 2.6e-06 55.1 42 57.1
A04p11380 Brassica napus HOM05D001038 ORTHO05D000395 3.3e-06 54.7 54 46.3
BNapus_Darmor_BZH_scaffold_97p00150 Brassica napus HOM05D001038 ORTHO05D000395 3.3e-06 54.7 51 52.9
C09p45390 Brassica napus HOM05D001038 ORTHO05D024072 3.3e-06 54.7 60 41.7
BraA04t16800Z Brassica rapa HOM05D001038 ORTHO05D000395 3.3e-06 54.7 54 46.3
BcaB04g19295 Brassica carinata HOM05D001038 ORTHO05D000395 4.4e-06 54.3 53 49.1
BcaC03g17929 Brassica carinata HOM05D001038 ORTHO05D000395 4.4e-06 54.3 60 50.0
BcaC08g43120 Brassica carinata HOM05D001038 ORTHO05D032078 4.4e-06 54.3 51 51.0
A02p27290 Brassica napus HOM05D001038 ORTHO05D000395 4.4e-06 54.3 51 51.0
C07p60310 Brassica napus HOM05D001038 ORTHO05D000395 4.4e-06 54.3 50 44.0
BraA02t07755Z Brassica rapa HOM05D001038 ORTHO05D000395 4.4e-06 54.3 51 51.0
BcaC07g37226 Brassica carinata HOM05D000048 ORTHO05D002390 5.7e-06 53.9 48 50.0
BolC4t23574H Brassica oleracea HOM05D001038 ORTHO05D000395 5.7e-06 53.9 50 50.0
BraA08t32580Z Brassica rapa HOM05D001038 ORTHO05D000395 5.7e-06 53.9 48 47.9
BraA09t36747Z Brassica rapa HOM05D001038 ORTHO05D000395 5.7e-06 53.9 51 51.0
BcaB01g01699 Brassica carinata HOM05D001038 ORTHO05D032034 7.5e-06 53.5 40 60.0
BcaC08g46980 Brassica carinata HOM05D001038 ORTHO05D000395 7.5e-06 53.5 59 45.8
BolC5t34489H Brassica oleracea HOM05D001038 ORTHO05D000395 7.5e-06 53.5 49 44.9
BraA06t25409Z Brassica rapa HOM05D001038 ORTHO05D000395 7.5e-06 53.5 59 39.0
BcaB01g01124 Brassica carinata HOM05D001038 ORTHO05D000395 9.7e-06 53.1 52 46.2
BcaC04g20742 Brassica carinata HOM05D001038 ORTHO05D010763 9.7e-06 53.1 51 49.0
BcaC07g37762 Brassica carinata HOM05D001038 ORTHO05D000395 9.7e-06 53.1 51 47.1
C09p39690 Brassica napus HOM05D001038 ORTHO05D000395 9.7e-06 53.1 51 49.0
BolC8t48147H Brassica oleracea HOM05D001038 ORTHO05D000395 9.7e-06 53.1 51 47.1
BolC9t56849H Brassica oleracea HOM05D001038 ORTHO05D000395 9.7e-06 53.1 51 49.0


User provided reference genes

Program Settings