Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g01825 Brassica carinata HOM05D001038 ORTHO05D000395 2.9e-260 901.4 450 100.0
BraSC37t46126Z Brassica rapa HOM05D001038 ORTHO05D016776 1.1e-99 367.9 551 45.2
C08p22730 Brassica napus HOM05D001038 ORTHO05D016776 5.5e-94 349.0 426 50.7
BolC4t27749H Brassica oleracea HOM05D001038 ORTHO05D016776 7.2e-94 348.6 426 50.7
A10p08770 Brassica napus HOM05D001038 ORTHO05D016776 8.3e-82 308.5 283 61.1
C04p40350 Brassica napus HOM05D001038 ORTHO05D016776 1.6e-77 294.3 282 58.5
BolC4t25613H Brassica oleracea HOM05D001038 ORTHO05D016776 7.0e-73 278.9 422 45.3
BcaC01g03622 Brassica carinata HOM05D001038 ORTHO05D016776 6.1e-69 265.8 342 48.2
BcaB05g22095 Brassica carinata HOM05D001038 ORTHO05D016776 1.2e-51 208.4 279 49.1
BcaB01g04196 Brassica carinata HOM05D001038 ORTHO05D000395 4.9e-50 203.0 471 37.6
BcaC08g46850 Brassica carinata HOM05D001038 ORTHO05D000395 1.4e-49 201.4 532 33.6
BcaC07g39263 Brassica carinata HOM05D001038 ORTHO05D016776 7.3e-46 189.1 153 66.0
BraA05t21228Z Brassica rapa HOM05D001038 ORTHO05D018589 9.6e-46 188.7 482 31.5
BcaB02g06555 Brassica carinata HOM05D001038 ORTHO05D010763 1.6e-45 188.0 253 43.1
A05p23600 Brassica napus HOM05D001038 ORTHO05D018589 6.2e-45 186.0 500 31.4
C04p40300 Brassica napus HOM05D003139 ORTHO05D003540 1.2e-43 181.8 325 40.9
BcaB06g26737 Brassica carinata HOM05D001038 ORTHO05D010763 1.7e-42 177.9 207 45.4
BcaB05g22891 Brassica carinata HOM05D001038 ORTHO05D010763 5.4e-41 172.9 200 48.0
BcaC02g09232 Brassica carinata HOM05D003139 ORTHO05D003540 1.3e-39 168.3 195 52.8
BraA10t43039Z Brassica rapa HOM05D001038 ORTHO05D000395 1.5e-38 164.9 243 42.0
A04p22180 Brassica napus HOM05D001038 ORTHO05D000395 1.9e-38 164.5 243 42.0
BcaB05g23462 Brassica carinata HOM05D001038 ORTHO05D091267 1.3e-37 161.8 233 46.8
BcaB06g25472 Brassica carinata HOM05D001038 ORTHO05D010763 8.1e-37 159.1 444 28.8
BcaB07g32567 Brassica carinata HOM05D001038 ORTHO05D010763 8.1e-37 159.1 256 36.7
BcaB07g33328 Brassica carinata HOM05D001038 ORTHO05D010763 1.2e-35 155.2 405 31.9
BcaNung01360 Brassica carinata HOM05D001038 ORTHO05D010763 1.5e-35 154.8 202 44.1
C07p34820 Brassica napus HOM05D001038 ORTHO05D000395 1.9e-33 147.9 532 28.2
BraA06t24545Z Brassica rapa HOM05D001038 ORTHO05D024045 1.6e-32 144.8 213 40.4
BcaC08g44172 Brassica carinata HOM05D001038 ORTHO05D018589 2.1e-32 144.4 187 42.8
BolC9t55839H Brassica oleracea HOM05D001038 ORTHO05D016703 7.3e-30 136.0 286 35.0
BolC7t40492H Brassica oleracea HOM05D001038 ORTHO05D010763 1.4e-28 131.7 156 46.2
BcaC05g24336 Brassica carinata HOM05D001038 ORTHO05D016776 2.0e-27 127.9 77 81.8
BcaB03g16464 Brassica carinata HOM05D001038 ORTHO05D018589 2.6e-27 127.5 401 31.9
BcaB04g17690 Brassica carinata HOM05D001038 ORTHO05D018589 9.9e-27 125.6 367 32.2
BolC4t26248H Brassica oleracea HOM05D001038 ORTHO05D018589 3.8e-26 123.6 240 37.5
C09p60390 Brassica napus HOM05D001038 ORTHO05D016703 3.2e-25 120.6 498 27.3
BcaB02g10939 Brassica carinata HOM05D001038 ORTHO05D000395 4.2e-25 120.2 464 26.7
BraA05t19810Z Brassica rapa HOM05D001038 ORTHO05D016703 6.0e-24 116.3 498 26.9
BolC7t41164H Brassica oleracea HOM05D001038 ORTHO05D000395 1.3e-23 115.2 152 42.8
BolC5t32403H Brassica oleracea HOM05D001038 ORTHO05D016716 3.9e-23 113.6 143 44.8
BcaC02g08100 Brassica carinata HOM05D001038 ORTHO05D018589 6.7e-23 112.8 145 44.1
BraA09t41072Z Brassica rapa HOM05D001038 ORTHO05D000395 3.3e-22 110.5 198 35.4
A03p31860 Brassica napus HOM05D001038 ORTHO05D024045 7.4e-22 109.4 162 40.7
A03p51100 Brassica napus HOM05D001038 ORTHO05D024045 7.4e-22 109.4 162 40.7
C07p12170 Brassica napus HOM05D001038 ORTHO05D010763 3.7e-21 107.1 217 30.9
BcaC06g35713 Brassica carinata HOM05D001038 ORTHO05D024045 1.4e-20 105.1 336 30.1
C08p05940 Brassica napus HOM05D001038 ORTHO05D024385 4.0e-20 103.6 194 30.9
C07p11760 Brassica napus HOM05D001038 ORTHO05D024045 5.3e-20 103.2 144 43.1
A09p34780 Brassica napus HOM05D001038 ORTHO05D000395 1.2e-19 102.1 189 32.8
BcaB04g17766 Brassica carinata HOM05D001038 ORTHO05D000395 1.5e-19 101.7 211 32.7
BcaB08g34565 Brassica carinata HOM05D001038 ORTHO05D000395 2.6e-19 100.9 192 36.5
A01p24490 Brassica napus HOM05D001038 ORTHO05D021947 3.4e-19 100.5 189 31.7
BcaNung00229 Brassica carinata HOM05D001038 ORTHO05D000395 7.6e-19 99.4 211 32.7
BraA01t02230Z Brassica rapa HOM05D001038 ORTHO05D000395 1.0e-18 99.0 189 31.7
BolC2t11143H Brassica oleracea HOM05D001038 ORTHO05D024385 1.3e-18 98.6 217 29.5
BolC7t41410H Brassica oleracea HOM05D001038 ORTHO05D010763 1.7e-18 98.2 192 31.8
C07p09720 Brassica napus HOM05D001038 ORTHO05D010763 2.2e-18 97.8 193 30.6
BcaB07g32737 Brassica carinata HOM05D001038 ORTHO05D000395 6.5e-18 96.3 134 44.0
BcaB06g26720 Brassica carinata HOM05D001038 ORTHO05D000395 1.4e-17 95.1 188 29.8
C09p42070 Brassica napus HOM05D001038 ORTHO05D021947 1.4e-17 95.1 482 24.3
BcaC05g25823 Brassica carinata HOM05D001038 ORTHO05D014932 1.9e-17 94.7 217 33.2
BolC7t41626H Brassica oleracea HOM05D001038 ORTHO05D014932 1.9e-17 94.7 217 33.6
BolC7t41688H Brassica oleracea HOM05D001038 ORTHO05D000395 1.9e-17 94.7 217 29.0
BcaB05g25087 Brassica carinata HOM05D001038 ORTHO05D000395 3.2e-17 94.0 189 30.2
BcaB08g35144 Brassica carinata HOM05D001038 ORTHO05D021599 9.3e-17 92.4 195 34.9
BcaC08g44444 Brassica carinata HOM05D001038 ORTHO05D016716 1.2e-16 92.0 143 39.2
BcaC03g17929 Brassica carinata HOM05D001038 ORTHO05D000395 1.6e-16 91.7 191 33.0
BcaC06g35484 Brassica carinata HOM05D001038 ORTHO05D000395 6.0e-16 89.7 198 31.3
BcaC05g28787 Brassica carinata HOM05D001038 ORTHO05D016716 7.9e-16 89.4 143 39.2
C05p37200 Brassica napus HOM05D001038 ORTHO05D017560 7.9e-16 89.4 188 30.9
C06p10570 Brassica napus HOM05D001038 ORTHO05D014932 7.9e-16 89.4 217 31.8
BcaC07g37762 Brassica carinata HOM05D001038 ORTHO05D000395 1.0e-15 89.0 453 23.0
BraA02t07755Z Brassica rapa HOM05D001038 ORTHO05D000395 1.0e-15 89.0 503 24.5
BraA06t25412Z Brassica rapa HOM05D001038 ORTHO05D017560 1.3e-15 88.6 211 30.3
BolC7t41684H Brassica oleracea HOM05D001038 ORTHO05D010763 1.8e-15 88.2 207 28.5
BolC8t48147H Brassica oleracea HOM05D001038 ORTHO05D000395 2.3e-15 87.8 455 23.3
BolC9t58942H Brassica oleracea HOM05D001038 ORTHO05D010763 3.0e-15 87.4 157 36.3
BcaB04g17277 Brassica carinata HOM05D001038 ORTHO05D014932 3.9e-15 87.0 201 30.3
BcaC04g21625 Brassica carinata HOM05D001038 ORTHO05D016703 3.9e-15 87.0 239 32.2
BcaNung04782 Brassica carinata HOM05D001038 ORTHO05D014932 3.9e-15 87.0 201 30.3
C02p52080 Brassica napus HOM05D001038 ORTHO05D019962 3.9e-15 87.0 193 30.6
BolC2t11293H Brassica oleracea HOM05D001038 ORTHO05D019962 3.9e-15 87.0 193 30.6
BcaC05g26744 Brassica carinata HOM05D001038 ORTHO05D000395 5.1e-15 86.7 470 23.0
C05p48930 Brassica napus HOM05D001038 ORTHO05D016716 6.7e-15 86.3 197 31.5
BolC5t33633H Brassica oleracea HOM05D001038 ORTHO05D016716 6.7e-15 86.3 197 31.5
BcaB02g10814 Brassica carinata HOM05D001038 ORTHO05D010946 1.1e-14 85.5 186 29.6
BcaB06g28161 Brassica carinata HOM05D001038 ORTHO05D000395 1.1e-14 85.5 483 23.2
BcaB08g36820 Brassica carinata HOM05D001038 ORTHO05D016703 1.1e-14 85.5 179 34.6
BcaNung00468 Brassica carinata HOM05D001038 ORTHO05D000395 1.5e-14 85.1 487 25.7
BcaB02g10756 Brassica carinata HOM05D000367 ORTHO05D001227 1.9e-14 84.7 112 47.3
BcaB07g33632 Brassica carinata HOM05D001038 ORTHO05D016703 2.5e-14 84.3 177 33.3
BcaB06g28131 Brassica carinata HOM05D001038 ORTHO05D000395 7.4e-14 82.8 213 29.6
BraA02t08689Z Brassica rapa HOM05D001038 ORTHO05D010763 9.6e-14 82.4 167 31.7
C02p39590 Brassica napus HOM05D001038 ORTHO05D021697 2.8e-13 80.9 131 38.2
BolC2t09973H Brassica oleracea HOM05D001038 ORTHO05D021697 2.8e-13 80.9 131 38.2
BcaC04g20742 Brassica carinata HOM05D001038 ORTHO05D010763 4.8e-13 80.1 188 30.9
BcaC08g46990 Brassica carinata HOM05D025413 ORTHO05D021599 4.8e-13 80.1 112 39.3
BraA04t17267Z Brassica rapa HOM05D001038 ORTHO05D014932 6.2e-13 79.7 200 30.0
C07p15560 Brassica napus HOM05D001038 ORTHO05D000395 8.2e-13 79.3 198 28.3
BcaB03g16620 Brassica carinata HOM05D001038 ORTHO05D000395 1.1e-12 79.0 171 33.3
C09p12400 Brassica napus HOM05D001038 ORTHO05D019962 1.1e-12 79.0 203 29.6
C07p13440 Brassica napus HOM05D001038 ORTHO05D016703 1.4e-12 78.6 384 26.0
C09p39680 Brassica napus HOM05D001038 ORTHO05D010763 1.4e-12 78.6 188 30.9
BolC7t41839H Brassica oleracea HOM05D001038 ORTHO05D016703 1.4e-12 78.6 384 26.0
C08p22120 Brassica napus HOM05D001038 ORTHO05D021697 1.8e-12 78.2 92 45.7
C06p18900 Brassica napus HOM05D001038 ORTHO05D016716 4.1e-12 77.0 113 39.8
BraA10t43660Z Brassica rapa HOM05D025413 ORTHO05D021599 4.1e-12 77.0 132 40.9
BcaC08g44142 Brassica carinata HOM05D001038 ORTHO05D000395 2.0e-11 74.7 123 41.5
C07p11920 Brassica napus HOM05D001038 ORTHO05D031981 2.6e-11 74.3 85 45.9
BcaB08g35416 Brassica carinata HOM05D001038 ORTHO05D017560 5.8e-11 73.2 194 30.4
BcaB01g01349 Brassica carinata HOM05D001038 ORTHO05D096136 1.0e-10 72.4 82 43.9
BcaB01g01601 Brassica carinata HOM05D001038 ORTHO05D090378 1.7e-10 71.6 116 36.2
BraA02t06821Z Brassica rapa HOM05D001038 ORTHO05D000395 1.7e-10 71.6 88 40.9
BcaB03g16260 Brassica carinata HOM05D001038 ORTHO05D019962 2.2e-10 71.2 188 27.7
BolC6t36138H Brassica oleracea HOM05D001038 ORTHO05D014932 2.2e-10 71.2 182 29.1
BolC9t55517H Brassica oleracea HOM05D001038 ORTHO05D024385 6.5e-10 69.7 99 36.4
BcaB01g00832 Brassica carinata HOM05D001038 ORTHO05D000395 1.1e-09 68.9 141 34.8
BcaC06g35568 Brassica carinata HOM05D001038 ORTHO05D016703 2.5e-09 67.8 133 36.1
BcaC02g07854 Brassica carinata HOM05D001038 ORTHO05D090554 5.5e-09 66.6 176 33.5
BcaC09g49024 Brassica carinata HOM05D001038 ORTHO05D000395 5.5e-09 66.6 187 28.3
AT2G07240 Arabidopsis thaliana HOM05D001038 ORTHO05D010763 7.1e-09 66.2 154 28.6
BcaC01g03929 Brassica carinata HOM05D001038 ORTHO05D010946 2.1e-08 64.7 236 28.0
BcaB02g10826 Brassica carinata HOM05D001038 ORTHO05D021697 1.3e-07 62.0 99 32.3
BcaB03g16061 Brassica carinata HOM05D001038 ORTHO05D000395 1.3e-07 62.0 463 24.2
Thhalv10002173m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 2.3e-07 61.2 216 26.9
BcaB01g01915 Brassica carinata HOM05D001038 ORTHO05D000395 3.9e-07 60.5 430 24.9
BcaC05g24335 Brassica carinata HOM05D001038 ORTHO05D091420 3.9e-07 60.5 39 74.4
BcaC06g36128 Brassica carinata HOM05D007774 ORTHO05D000395 3.9e-07 60.5 67 49.3
C07p07480 Brassica napus HOM05D001038 ORTHO05D000395 3.9e-07 60.5 67 49.3
Carub.0004s1123 Capsella rubella HOM05D001038 ORTHO05D000395 3.9e-07 60.5 147 25.9
C07p12200 Brassica napus HOM05D001038 ORTHO05D010763 5.1e-07 60.1 81 37.0
C06p00840 Brassica napus HOM05D001038 ORTHO05D010946 6.7e-07 59.7 229 27.5
BraA08t34217Z Brassica rapa HOM05D001038 ORTHO05D016716 6.7e-07 59.7 57 49.1
BcaB06g27965 Brassica carinata HOM05D001038 ORTHO05D000395 1.5e-06 58.5 467 23.1
BcaC07g37120 Brassica carinata HOM05D025413 ORTHO05D021599 1.9e-06 58.2 149 32.2
BcaC08g46980 Brassica carinata HOM05D001038 ORTHO05D000395 2.5e-06 57.8 196 27.6
BcaB05g24425 Brassica carinata HOM05D001038 ORTHO05D024385 3.3e-06 57.4 89 30.3
BcaC03g15830 Brassica carinata HOM05D001038 ORTHO05D016716 3.3e-06 57.4 78 39.7
BolC8t47294H Brassica oleracea HOM05D025413 ORTHO05D021599 4.3e-06 57.0 111 34.2
BcaC06g35698 Brassica carinata HOM05D001038 ORTHO05D031981 5.7e-06 56.6 56 50.0
BcaC06g36746 Brassica carinata HOM05D001038 ORTHO05D010763 7.4e-06 56.2 186 28.0
Thhalv10029129m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 7.4e-06 56.2 151 31.1
A01p23200 Brassica napus HOM05D001038 ORTHO05D000395 9.7e-06 55.8 401 23.7
C07p30940 Brassica napus HOM05D001038 ORTHO05D014932 9.7e-06 55.8 99 31.3
C08p04910 Brassica napus HOM05D025413 ORTHO05D021599 9.7e-06 55.8 111 34.2
Thhalv10003372m.g Eutrema salsugineum HOM05D001038 ORTHO05D010946 9.7e-06 55.8 196 31.1


User provided reference genes

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