Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g01698 Brassica carinata HOM05D001038 ORTHO05D016716 2.3e-66 255.4 122 100.0
BcaC08g44444 Brassica carinata HOM05D001038 ORTHO05D016716 1.4e-28 129.8 113 58.4
C06p18900 Brassica napus HOM05D001038 ORTHO05D016716 1.4e-28 129.8 113 58.4
C05p48930 Brassica napus HOM05D001038 ORTHO05D016716 1.6e-27 126.3 110 59.1
BolC5t33633H Brassica oleracea HOM05D001038 ORTHO05D016716 1.6e-27 126.3 110 59.1
BcaC05g28787 Brassica carinata HOM05D001038 ORTHO05D016716 2.7e-27 125.6 113 58.4
BcaC03g15830 Brassica carinata HOM05D001038 ORTHO05D016716 2.5e-17 92.4 121 45.5
A04p22180 Brassica napus HOM05D001038 ORTHO05D000395 6.2e-16 87.8 119 42.0
BraA10t43039Z Brassica rapa HOM05D001038 ORTHO05D000395 6.2e-16 87.8 119 42.0
BraA10t43660Z Brassica rapa HOM05D025413 ORTHO05D021599 6.2e-16 87.8 119 42.0
BcaC08g44142 Brassica carinata HOM05D001038 ORTHO05D000395 3.1e-15 85.5 116 41.4
BraA08t34217Z Brassica rapa HOM05D001038 ORTHO05D016716 3.4e-14 82.0 65 61.5
BcaB07g32567 Brassica carinata HOM05D001038 ORTHO05D010763 9.9e-14 80.5 109 40.4
BolC9t58942H Brassica oleracea HOM05D001038 ORTHO05D010763 2.9e-13 79.0 104 41.3
BolC5t32403H Brassica oleracea HOM05D001038 ORTHO05D016716 4.9e-13 78.2 65 60.0
BcaC08g46990 Brassica carinata HOM05D025413 ORTHO05D021599 1.4e-12 76.6 79 50.6
BcaB08g35144 Brassica carinata HOM05D001038 ORTHO05D021599 2.4e-12 75.9 105 40.0
BcaC06g35713 Brassica carinata HOM05D001038 ORTHO05D024045 1.0e-10 70.5 83 45.8
C07p11760 Brassica napus HOM05D001038 ORTHO05D024045 1.0e-10 70.5 83 45.8
A03p31860 Brassica napus HOM05D001038 ORTHO05D024045 3.9e-10 68.6 80 45.0
A03p51100 Brassica napus HOM05D001038 ORTHO05D024045 3.9e-10 68.6 80 45.0
BcaC05g27690 Brassica carinata HOM05D001038 ORTHO05D016716 5.6e-09 64.7 42 71.4
BcaC06g36746 Brassica carinata HOM05D001038 ORTHO05D010763 7.4e-09 64.3 72 45.8
C07p34820 Brassica napus HOM05D001038 ORTHO05D000395 7.4e-09 64.3 88 42.0
C08p04910 Brassica napus HOM05D025413 ORTHO05D021599 1.6e-08 63.2 99 40.4
BolC7t40492H Brassica oleracea HOM05D001038 ORTHO05D010763 1.6e-08 63.2 65 49.2
BolC8t47294H Brassica oleracea HOM05D025413 ORTHO05D021599 1.6e-08 63.2 99 40.4
BcaC04g21625 Brassica carinata HOM05D001038 ORTHO05D016703 2.8e-08 62.4 106 35.8
BolC9t55839H Brassica oleracea HOM05D001038 ORTHO05D016703 2.8e-08 62.4 106 35.8
BcaC06g35568 Brassica carinata HOM05D001038 ORTHO05D016703 1.1e-07 60.5 89 42.7
C07p13440 Brassica napus HOM05D001038 ORTHO05D016703 1.4e-07 60.1 86 43.0
BolC7t41839H Brassica oleracea HOM05D001038 ORTHO05D016703 1.4e-07 60.1 86 43.0
BcaB08g36820 Brassica carinata HOM05D001038 ORTHO05D016703 1.2e-06 57.0 107 33.6
C09p60390 Brassica napus HOM05D001038 ORTHO05D016703 1.2e-06 57.0 107 33.6
BcaC08g46850 Brassica carinata HOM05D001038 ORTHO05D000395 3.4e-06 55.5 103 35.0
BcaB02g06555 Brassica carinata HOM05D001038 ORTHO05D010763 7.6e-06 54.3 97 38.1


User provided reference genes

Program Settings