Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
BcaB01g00604 Brassica carinata HOM05D001678 ORTHO05D001698 1.4e-69 266.2 132 100.0
BolC5t31786H Brassica oleracea HOM05D001678 ORTHO05D001698 1.7e-43 179.5 118 80.5
C04p25210 Brassica napus HOM05D039589 ORTHO05D001698 8.2e-30 134.0 112 65.2
Carub.0002s1509 Capsella rubella HOM05D001678 ORTHO05D001698 1.8e-24 116.3 120 53.3
Carub.0007s2622 Capsella rubella HOM05D001678 ORTHO05D001698 1.8e-24 116.3 120 53.3
BcaC05g27161 Brassica carinata HOM05D001678 ORTHO05D001698 1.6e-17 93.2 84 64.3
C05p30510 Brassica napus HOM05D001678 ORTHO05D032997 1.6e-17 93.2 61 82.0
Carub.0004s0720 Capsella rubella HOM05D001678 ORTHO05D001698 2.4e-13 79.3 114 42.1
AL4G17660 Arabidopsis lyrata HOM05D001678 ORTHO05D001698 9.1e-13 77.4 124 40.3
AL4G17900 Arabidopsis lyrata HOM05D001678 ORTHO05D001698 9.1e-13 77.4 124 40.3
AL4G17920 Arabidopsis lyrata HOM05D001678 ORTHO05D001698 5.9e-12 74.7 115 40.0
BcaC03g17938 Brassica carinata HOM05D001678 ORTHO05D001698 7.7e-12 74.3 55 70.9
Carub.0007s0094 Capsella rubella HOM05D001678 ORTHO05D001698 1.0e-11 73.9 115 40.9
BcaC07g37804 Brassica carinata HOM05D001678 ORTHO05D001698 1.3e-11 73.6 117 37.6
C02p32520 Brassica napus HOM05D001678 ORTHO05D001698 1.3e-11 73.6 117 37.6
BolC8t48193H Brassica oleracea HOM05D001678 ORTHO05D001698 1.3e-11 73.6 117 37.6
BraA06t25821Z Brassica rapa HOM05D001678 ORTHO05D001698 5.0e-11 71.6 111 43.2
A01p29830 Brassica napus HOM05D001678 ORTHO05D001698 8.5e-11 70.9 117 36.8
BraA01t03111Z Brassica rapa HOM05D001678 ORTHO05D001698 8.5e-11 70.9 117 36.8
BcaB01g02681 Brassica carinata HOM05D001678 ORTHO05D001698 3.2e-10 68.9 114 40.4
A10p12020 Brassica napus HOM05D001678 ORTHO05D001698 1.4e-08 63.5 112 38.4
BraA10t43304Z Brassica rapa HOM05D001678 ORTHO05D001698 1.4e-08 63.5 112 38.4
A03p43320 Brassica napus HOM05D001678 ORTHO05D001698 5.2e-08 61.6 113 37.2
C06p06690 Brassica napus HOM05D001678 ORTHO05D001698 5.2e-08 61.6 93 39.8
AT5G29613 Arabidopsis thaliana HOM05D001678 ORTHO05D001698 2.0e-07 59.7 41 63.4
BcaB05g23520 Brassica carinata HOM05D001678 ORTHO05D001698 2.0e-07 59.7 48 60.4
BolC7t41455H Brassica oleracea HOM05D001678 ORTHO05D001698 2.6e-07 59.3 93 45.2
BcaC06g36603 Brassica carinata HOM05D001678 ORTHO05D001698 5.7e-07 58.2 117 34.2
C07p02270 Brassica napus HOM05D001678 ORTHO05D001698 5.7e-07 58.2 117 34.2
BolC7t40637H Brassica oleracea HOM05D001678 ORTHO05D001698 5.7e-07 58.2 117 34.2
Carub.0006s2679 Capsella rubella HOM05D001678 ORTHO05D001698 5.7e-07 58.2 112 40.2
Thhalv10029423m.g Eutrema salsugineum HOM05D001678 ORTHO05D001698 1.3e-06 57.0 125 37.6
AT5G27260 Arabidopsis thaliana HOM05D001678 ORTHO05D001698 1.7e-06 56.6 96 40.6
BolC2t09580H Brassica oleracea HOM05D001678 ORTHO05D001698 1.7e-06 56.6 48 56.2
Carub.0006s3595 Capsella rubella HOM05D001678 ORTHO05D001698 2.8e-06 55.8 47 57.4
Carub.0008s1510 Capsella rubella HOM05D001678 ORTHO05D001698 2.8e-06 55.8 47 57.4
BolC3t20376H Brassica oleracea HOM05D001678 ORTHO05D001698 4.8e-06 55.1 91 37.4
Sp7g09060 Schrenkiella parvula HOM05D001678 ORTHO05D001698 4.8e-06 55.1 93 39.8
A09p37990 Brassica napus HOM05D001678 ORTHO05D001698 8.2e-06 54.3 117 33.3
BraA09t39310Z Brassica rapa HOM05D001678 ORTHO05D001698 8.2e-06 54.3 117 33.3


User provided reference genes

Program Settings