Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr9.862 Acer truncatum HOM05D003498 ORTHO05D004191 1.8e-37 158.7 75 100.0
QL02p008668 Quercus lobata HOM05D003498 ORTHO05D004191 2.8e-19 98.2 83 66.3
Manes.14G169300 Manihot esculenta HOM05D003498 ORTHO05D004191 2.4e-18 95.1 83 65.1
Manes.14G170700 Manihot esculenta HOM05D003498 ORTHO05D004191 3.1e-18 94.7 83 63.9
Atru.chr10.1225 Acer truncatum HOM05D003498 ORTHO05D004191 4.1e-18 94.4 83 65.1
Sabra16G0216000 Salix brachista HOM05D003498 ORTHO05D004191 2.0e-17 92.0 83 61.4
CiPaw.07G235500 Carya illinoinensis HOM05D003498 ORTHO05D004191 2.6e-17 91.7 75 66.7
Ciclev10016330m.g Citrus clementina HOM05D003498 ORTHO05D004191 4.5e-17 90.9 83 62.7
Actinidia05930 Actinidia chinensis HOM05D003498 ORTHO05D004191 5.9e-17 90.5 83 63.9
Actinidia38210 Actinidia chinensis HOM05D003498 ORTHO05D004191 5.9e-17 90.5 83 62.7
arahy.Tifrunner.gnm1.ann1.82NANE Arachis hypogaea HOM05D003498 ORTHO05D004191 5.9e-17 90.5 83 62.7
arahy.Tifrunner.gnm1.ann1.C6G3CE Arachis hypogaea HOM05D003498 ORTHO05D004191 5.9e-17 90.5 83 62.7
Duzib133G0132 Durio zibethinus HOM05D003498 ORTHO05D004191 5.9e-17 90.5 83 63.9
Lj5g0005525 Lotus japonicus HOM05D003498 ORTHO05D004191 5.9e-17 90.5 83 63.9
Potri.001G334900 Populus trichocarpa HOM05D003498 ORTHO05D004191 5.9e-17 90.5 83 59.0
CiPaw.08G003000 Carya illinoinensis HOM05D003498 ORTHO05D004191 1.0e-16 89.7 83 62.7
Lj1g0028146 Lotus japonicus HOM05D003498 ORTHO05D004191 1.0e-16 89.7 83 62.7
QL02p026417 Quercus lobata HOM05D003498 ORTHO05D004191 1.0e-16 89.7 83 61.4
Actinidia18419 Actinidia chinensis HOM05D003498 ORTHO05D004191 1.3e-16 89.4 83 61.4
Dinv33373 Davidia involucrata HOM05D003498 ORTHO05D004191 1.3e-16 89.4 83 61.4
Eucgr.A01374 Eucalyptus grandis HOM05D003498 ORTHO05D004191 1.3e-16 89.4 83 61.4
RcHm_v2.0_Chr2g0174641 Rosa chinensis HOM05D003498 ORTHO05D004191 1.3e-16 89.4 83 61.4
TAR374G1609 Trochodendron aralioides HOM05D003498 ORTHO05D004191 1.3e-16 89.4 83 62.7
Aqoxy51s003 Aquilegia oxysepala HOM05D003498 ORTHO05D004191 1.7e-16 89.0 83 62.7
Aqoxy7G03334 Aquilegia oxysepala HOM05D003498 ORTHO05D004191 1.7e-16 89.0 83 62.7
TAR622G0600 Trochodendron aralioides HOM05D003498 ORTHO05D004191 1.7e-16 89.0 83 62.7
Aqoxy3G02772 Aquilegia oxysepala HOM05D003498 ORTHO05D004191 2.2e-16 88.6 83 62.7
Oeu001847.2 Olea europaea HOM05D003498 ORTHO05D004191 2.2e-16 88.6 83 61.4
MBI11_g00914_MAGBIO Magnolia biondii HOM05D003498 ORTHO05D004191 3.8e-16 87.8 83 62.7
MD17G1016300 Malus domestica HOM05D003498 ORTHO05D004191 3.8e-16 87.8 83 61.4
PGR083G1382 Punica granatum HOM05D003498 ORTHO05D004191 3.8e-16 87.8 83 60.2
Duzib138G0533 Durio zibethinus HOM05D003498 ORTHO05D004191 5.0e-16 87.4 83 62.7
Rhsim10G0009900 Rhododendron simsii HOM05D003498 ORTHO05D004191 5.0e-16 87.4 83 60.2
vmacro05933 Vaccinium macrocarpon HOM05D003498 ORTHO05D004191 5.0e-16 87.4 83 61.4
FvH4_6g52930 Fragaria vesca HOM05D003498 ORTHO05D004191 6.5e-16 87.0 83 60.2
FAN05G5642 Fragaria x ananassa HOM05D003498 ORTHO05D004191 6.5e-16 87.0 83 60.2
FAN09G1233 Fragaria x ananassa HOM05D003498 ORTHO05D004191 6.5e-16 87.0 83 60.2
FAN14G2218 Fragaria x ananassa HOM05D003498 ORTHO05D004191 6.5e-16 87.0 83 60.2
Thecc.04G123800 Theobroma cacao HOM05D003498 ORTHO05D004191 6.5e-16 87.0 83 62.7
CSS0027983 Camellia sinensis var. sinensis HOM05D003498 ORTHO05D004191 8.5e-16 86.7 83 60.2
COL.COLO4_27123 Corchorus olitorius HOM05D003498 ORTHO05D004191 8.5e-16 86.7 83 61.4
Migut.K01441 Erythranthe guttata HOM05D003498 ORTHO05D004191 8.5e-16 86.7 83 60.2
Hma1.2p1_0279F.1_g112380 Hydrangea macrophylla HOM05D003498 ORTHO05D004191 8.5e-16 86.7 83 60.2
Oeu001405.1 Olea europaea HOM05D003498 ORTHO05D004191 8.5e-16 86.7 83 60.2
Solyc07g048010.4 Solanum lycopersicum HOM05D003498 ORTHO05D004191 8.5e-16 86.7 83 62.7
Sopen07g024440 Solanum pennellii HOM05D003498 ORTHO05D004191 8.5e-16 86.7 83 62.7
FAN02G3013 Fragaria x ananassa HOM05D003498 ORTHO05D004191 1.1e-15 86.3 83 59.0
Lj7A607T30 Lonicera japonica HOM05D003498 ORTHO05D004191 1.1e-15 86.3 83 61.4
PSO541G3815 Papaver somniferum HOM05D003498 ORTHO05D004191 1.1e-15 86.3 83 60.2
PSO675G6488 Papaver somniferum HOM05D003498 ORTHO05D004191 1.1e-15 86.3 83 60.2
Psat5g244520 Pisum sativum HOM05D003498 ORTHO05D004191 1.1e-15 86.3 83 61.4
PGSC0003DMG400006157 Solanum tuberosum HOM05D003498 ORTHO05D004191 1.1e-15 86.3 83 62.7
TPR.G38988 Trifolium pratense HOM05D003498 ORTHO05D004191 1.1e-15 86.3 83 61.4
CSS0031931 Camellia sinensis var. sinensis HOM05D003498 ORTHO05D004191 1.5e-15 85.9 83 60.2
ClCG07G012360 Citrullus lanatus HOM05D003498 ORTHO05D004191 1.5e-15 85.9 83 57.8
MD09G1015900 Malus domestica HOM05D003498 ORTHO05D004191 1.5e-15 85.9 83 60.2
Prupe.3G301400 Prunus persica HOM05D003498 ORTHO05D004191 1.9e-15 85.5 83 60.2
Cc07_g00530 Coffea canephora HOM05D003498 ORTHO05D004191 2.5e-15 85.1 83 61.4
Gorai.001G085600 Gossypium raimondii HOM05D003498 ORTHO05D004191 2.5e-15 85.1 83 61.4
Aa31LG1G11800 Aethionema arabicum HOM05D003498 ORTHO05D004191 3.2e-15 84.7 83 59.0
ATR1120G052 Amborella trichopoda HOM05D003498 ORTHO05D004191 3.2e-15 84.7 83 60.2
Gohir.A11G167100 Gossypium hirsutum HOM05D003498 ORTHO05D004191 3.2e-15 84.7 83 60.2
Gohir.D11G173400 Gossypium hirsutum HOM05D003498 ORTHO05D004191 3.2e-15 84.7 83 60.2
Gorai.007G185700 Gossypium raimondii HOM05D003498 ORTHO05D004191 3.2e-15 84.7 83 60.2
Rhsim08G0045600 Rhododendron simsii HOM05D003498 ORTHO05D004191 3.2e-15 84.7 83 59.0
Sed0009078 Sechium edule HOM05D003498 ORTHO05D004191 3.2e-15 84.7 83 61.4
Cpa.g.sc802.1 Carica papaya HOM05D003498 ORTHO05D004191 4.2e-15 84.3 83 57.8
Medtr1g092440 Medicago truncatula HOM05D000397 ORTHO05D004191 4.2e-15 84.3 83 60.2
Sc07g0003610 Simmondsia chinensis HOM05D003498 ORTHO05D004191 4.2e-15 84.3 83 59.0
arahy.Tifrunner.gnm1.ann1.IHQ30F Arachis hypogaea HOM05D003498 ORTHO05D004191 5.5e-15 84.0 83 59.0
MSTRG.15556 Avicennia marina HOM05D003498 ORTHO05D004191 5.5e-15 84.0 83 59.0
Cfa012954 Carpinus fangiana HOM05D002694 ORTHO05D002927 5.5e-15 84.0 83 60.2
HanXRQChr14g0450941 Helianthus annuus HOM05D003498 ORTHO05D004191 5.5e-15 84.0 83 59.0
Nitab4.5_0002877g0040 Nicotiana tabacum HOM05D003498 ORTHO05D004191 5.5e-15 84.0 83 60.2
Nitab4.5_0011275g0010 Nicotiana tabacum HOM05D003498 ORTHO05D004191 5.5e-15 84.0 83 59.0
PSO170G3520 Papaver somniferum HOM05D003498 ORTHO05D004191 5.5e-15 84.0 83 60.2
PSO210G3977 Papaver somniferum HOM05D003498 ORTHO05D004191 5.5e-15 84.0 83 60.2
GSVIVG01001834001 Vitis vinifera HOM05D003498 ORTHO05D004191 5.5e-15 84.0 83 59.0
CANSAT56G0570 Cannabis sativa HOM05D003498 ORTHO05D004191 7.2e-15 83.6 83 59.0
Prupe.3G071800 Prunus persica HOM05D003498 ORTHO05D004191 7.2e-15 83.6 83 59.0
AT5G59440 Arabidopsis thaliana HOM05D003498 ORTHO05D004191 9.4e-15 83.2 83 59.0
CSS0032491 Camellia sinensis var. sinensis HOM05D003498 ORTHO05D004191 9.4e-15 83.2 83 57.8
Medtr0271s0030 Medicago truncatula HOM05D003498 ORTHO05D004191 9.4e-15 83.2 83 59.0
Medtr0274s0020 Medicago truncatula HOM05D003498 ORTHO05D004191 9.4e-15 83.2 83 59.0
Sp6g21120 Schrenkiella parvula HOM05D003498 ORTHO05D004191 9.4e-15 83.2 83 59.0
SGA_v2.0_scaffold47G17560 Striga asiatica HOM05D003498 ORTHO05D004191 9.4e-15 83.2 83 57.8
Carub.0008s2011 Capsella rubella HOM05D003498 ORTHO05D004191 1.2e-14 82.8 83 56.6
CAN.G1461.1 Capsicum annuum HOM05D003498 ORTHO05D004191 1.2e-14 82.8 83 60.2
AUR62012870 Chenopodium quinoa HOM05D003498 ORTHO05D004191 1.2e-14 82.8 83 59.0
Hund09045 Selenicereus undatus HOM05D003498 ORTHO05D004191 1.2e-14 82.8 83 59.0
VMungo1080G1345 Vigna mungo HOM05D003498 ORTHO05D004191 1.2e-14 82.8 83 59.0
AL8G35910 Arabidopsis lyrata HOM05D003498 ORTHO05D004191 1.6e-14 82.4 83 57.8
C09p51820 Brassica napus HOM05D000758 ORTHO05D001216 1.6e-14 82.4 83 56.6
Nitab4.5_0000441g0220 Nicotiana tabacum HOM05D003498 ORTHO05D004191 1.6e-14 82.4 83 59.0
A10p16650 Brassica napus HOM05D000758 ORTHO05D004191 2.1e-14 82.0 83 56.6
CARHR285810 Cardamine hirsuta HOM05D003498 ORTHO05D004191 2.1e-14 82.0 83 57.8
TPR.G16146 Trifolium pratense HOM05D003498 ORTHO05D004191 2.1e-14 82.0 80 60.0
TWI36G0082 Tripterygium wilfordii HOM05D003498 ORTHO05D004191 2.1e-14 82.0 83 56.6
Ca_01840_v3 Cicer arietinum L. HOM05D003498 ORTHO05D004191 2.7e-14 81.6 83 59.0
arahy.Tifrunner.gnm1.ann1.MGT28Z Arachis hypogaea HOM05D003498 ORTHO05D004191 3.6e-14 81.3 94 53.2
BcaB08g36258 Brassica carinata HOM05D003498 ORTHO05D004191 3.6e-14 81.3 83 57.8
AUR62017642 Chenopodium quinoa HOM05D003498 ORTHO05D004191 3.6e-14 81.3 83 57.8
Thhalv10014606m.g Eutrema salsugineum HOM05D003498 ORTHO05D004191 3.6e-14 81.3 83 57.8
Lsat_1_v5_gn_2_93800 Lactuca sativa HOM05D003498 ORTHO05D004191 3.6e-14 81.3 83 56.6
Peaxi162Scf00776g00325 Petunia axillaris HOM05D003498 ORTHO05D004191 3.6e-14 81.3 83 59.0
THA.LOC104810770 Tarenaya hassleriana HOM05D003498 ORTHO05D004191 3.6e-14 81.3 83 57.8
BraA10t43747Z Brassica rapa HOM05D003498 ORTHO05D004191 4.7e-14 80.9 83 55.4
Manes.06G007550 Manihot esculenta HOM05D003498 ORTHO05D004191 4.7e-14 80.9 83 56.6
unitig_748.g7053 Utricularia gibba HOM05D003498 ORTHO05D004191 4.7e-14 80.9 83 56.6
AUR62043688 Chenopodium quinoa HOM05D003498 ORTHO05D004191 6.1e-14 80.5 83 57.8
Phvul.005G072200 Phaseolus vulgaris HOM05D003498 ORTHO05D004191 6.1e-14 80.5 83 57.8
SEGI_21909 Sequoiadendron giganteum HOM05D003498 ORTHO05D004191 6.1e-14 80.5 83 55.4
BcaC04g19772 Brassica carinata HOM05D003498 ORTHO05D004191 8.0e-14 80.1 83 55.4
BolC9t58046H Brassica oleracea HOM05D000758 ORTHO05D004191 8.0e-14 80.1 83 55.4
ECA238G3044 Erigeron canadensis HOM05D003498 ORTHO05D004191 8.0e-14 80.1 83 57.8
Nitab4.5_0005699g0040 Nicotiana tabacum HOM05D003498 ORTHO05D004191 8.0e-14 80.1 83 59.0
PGR083G2492 Punica granatum HOM05D003498 ORTHO05D004191 1.4e-13 79.3 83 57.8
Zm00001eb109870 Zea mays HOM05D003498 ORTHO05D004191 1.4e-13 79.3 83 56.6
Zm00001eb248420 Zea mays HOM05D003498 ORTHO05D004191 1.4e-13 79.3 83 56.6
Glyma.13G277200 Glycine max HOM05D003498 ORTHO05D004191 1.8e-13 79.0 83 56.6
Lsat_1_v5_gn_2_32401 Lactuca sativa HOM05D003498 ORTHO05D004191 1.8e-13 79.0 83 55.4
SGA_v2.0_scaffold68G22828 Striga asiatica HOM05D003498 ORTHO05D004191 1.8e-13 79.0 83 55.4
vmacro18322 Vaccinium macrocarpon HOM05D003498 ORTHO05D004191 1.8e-13 79.0 52 75.0
Lalb_Chr10g0095001 Lupinus albus HOM05D003498 ORTHO05D004191 2.3e-13 78.6 83 55.4
Peaxi162Scf00147g01820 Petunia axillaris HOM05D003498 ORTHO05D004191 2.3e-13 78.6 83 56.6
DCAR_027394 Daucus carota HOM05D003498 ORTHO05D004191 3.0e-13 78.2 83 54.2
Zm00001eb208950 Zea mays HOM05D003498 ORTHO05D004191 4.0e-13 77.8 83 55.4
Cc06_g23000 Coffea canephora HOM05D003498 ORTHO05D004191 5.2e-13 77.4 81 54.3
MELO3C017855.2 Cucumis melo HOM05D003498 ORTHO05D004191 5.2e-13 77.4 83 54.2
CDE09G0325 Ceratophyllum demersum HOM05D003498 ORTHO05D004191 6.8e-13 77.0 82 52.4
CsaV3_4G001780 Cucumis sativus L. HOM05D003498 ORTHO05D004191 8.8e-13 76.6 83 51.8
Dinv27202 Davidia involucrata HOM05D003498 ORTHO05D004191 2.0e-12 75.5 46 76.1
EL10Ac9g22898 Beta vulgaris HOM05D003498 ORTHO05D004191 2.6e-12 75.1 83 55.4
Os07g0639900 Oryza sativa ssp. japonica HOM05D003498 ORTHO05D004191 2.6e-12 75.1 83 54.2
AUR62012113 Chenopodium quinoa HOM05D003498 ORTHO05D004191 3.4e-12 74.7 83 55.4
Zm00001eb311360 Zea mays HOM05D003498 ORTHO05D004191 4.4e-12 74.3 83 53.0
Ah.01g001720 Amaranthus hybridus HOM05D003498 ORTHO05D004191 2.2e-11 72.0 95 48.4
CSS0025632 Camellia sinensis var. sinensis HOM05D003498 ORTHO05D004191 2.2e-11 72.0 82 51.2
SMO201G0123 Selaginella moellendorffii HOM05D003498 ORTHO05D004191 3.7e-11 71.2 83 51.8
AUR62040722 Chenopodium quinoa HOM05D003498 ORTHO05D004191 4.8e-11 70.9 46 71.7
CBR_g30299 Chara braunii HOM05D003498 ORTHO05D004191 8.3e-11 70.1 81 49.4
HPP92_003500 Vanilla planifolia HOM05D003498 ORTHO05D004191 1.4e-10 69.3 82 48.8
HPP92_026896 Vanilla planifolia HOM05D003498 ORTHO05D004191 1.4e-10 69.3 82 48.8
CBR_g50851 Chara braunii HOM05D003498 ORTHO05D004191 1.8e-10 68.9 81 49.4
Gohir.D07G080500 Gossypium hirsutum HOM05D003498 ORTHO05D004191 5.9e-09 63.9 69 58.0
Hma1.2p1_1219F.1_g267800 Hydrangea macrophylla HOM05D003498 ORTHO05D004191 1.0e-08 63.2 40 72.5
AagrBONN_evm.TU.Sc2ySwM_228.2546 Anthoceros agrestis HOM05D003498 ORTHO05D004191 2.2e-08 62.0 83 43.4
CSS0006967 Camellia sinensis var. sinensis HOM05D003498 ORTHO05D004191 6.5e-08 60.5 83 51.8
Lalb_Chr01g0016871 Lupinus albus HOM05D003498 ORTHO05D004191 1.9e-07 58.9 72 51.4
Mapoly0001s0438 Marchantia polymorpha HOM05D003498 ORTHO05D004191 1.9e-07 58.9 83 44.6
Gohir.A07G076000 Gossypium hirsutum HOM05D003498 ORTHO05D004191 2.5e-07 58.5 63 54.0
TPR.G23191 Trifolium pratense HOM05D003498 ORTHO05D005148 5.5e-07 57.4 70 48.6
Atru.chr6.2501 Acer truncatum HOM05D003498 ORTHO05D004191 9.4e-07 56.6 64 51.6
C05p26950 Brassica napus HOM05D003498 ORTHO05D004191 2.1e-06 55.5 34 73.5


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