Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr9.64 Acer truncatum HOM05D001678 ORTHO05D001698 1.5e-101 372.9 191 100.0
Atru.chr13.2422 Acer truncatum HOM05D001678 ORTHO05D001698 3.5e-66 255.4 167 80.2
Atru.chr5.2051 Acer truncatum HOM05D001678 ORTHO05D001698 1.3e-63 246.9 257 58.4
Atru.chr2.1398 Acer truncatum HOM05D001678 ORTHO05D001698 1.2e-50 203.8 190 64.2
Prupe.3G105400 Prunus persica HOM05D001678 ORTHO05D001698 1.3e-39 167.2 163 59.5
Prupe.7G010100 Prunus persica HOM05D001678 ORTHO05D001698 1.4e-38 163.7 161 59.0
Glyma.08G218300 Glycine max HOM05D001678 ORTHO05D001698 7.4e-32 141.4 158 50.0
Glyma.10G211500 Glycine max HOM05D001678 ORTHO05D001698 9.7e-32 141.0 164 48.2
Glyma.20G169100 Glycine max HOM05D001678 ORTHO05D001698 9.7e-32 141.0 163 48.5
Glyma.04G175200 Glycine max HOM05D001678 ORTHO05D001698 1.3e-31 140.6 162 49.4
Glyma.10G200900 Glycine max HOM05D001678 ORTHO05D001698 2.2e-31 139.8 158 50.0
Glyma.01G126100 Glycine max HOM05D001678 ORTHO05D001698 2.8e-31 139.4 158 50.0
Glyma.06G182400 Glycine max HOM05D001678 ORTHO05D001698 2.8e-31 139.4 158 50.0
Glyma.10G293700 Glycine max HOM05D001678 ORTHO05D001698 2.8e-31 139.4 158 50.0
Glyma.12G113000 Glycine max HOM05D001678 ORTHO05D001698 2.8e-31 139.4 158 50.0
Glyma.15G233800 Glycine max HOM05D001678 ORTHO05D001698 2.8e-31 139.4 158 50.0
Glyma.18G292500 Glycine max HOM05D001678 ORTHO05D001698 2.8e-31 139.4 158 50.0
Glyma.19G032300 Glycine max HOM05D001678 ORTHO05D001698 2.8e-31 139.4 158 50.0
Glyma.01G110000 Glycine max HOM05D001678 ORTHO05D001698 3.7e-31 139.0 158 50.0
Glyma.06G095100 Glycine max HOM05D001678 ORTHO05D001698 4.8e-31 138.7 158 50.0
Glyma.05G193100 Glycine max HOM05D001678 ORTHO05D001698 6.3e-31 138.3 158 50.0
Glyma.15G150600 Glycine max HOM05D001678 ORTHO05D001698 6.3e-31 138.3 158 50.0
Glyma.09G071200 Glycine max HOM05D001678 ORTHO05D001698 8.2e-31 137.9 158 49.4
Glyma.13G184400 Glycine max HOM05D001678 ORTHO05D001698 8.2e-31 137.9 158 49.4
Glyma.14G095600 Glycine max HOM05D001678 ORTHO05D001698 8.2e-31 137.9 163 47.9
Glyma.08G239700 Glycine max HOM05D001678 ORTHO05D001698 1.1e-30 137.5 158 49.4
Glyma.09G168100 Glycine max HOM05D001678 ORTHO05D001698 1.4e-30 137.1 158 49.4
Glyma.11G167500 Glycine max HOM05D001678 ORTHO05D001698 2.4e-30 136.3 158 49.4
Glyma.18G175000 Glycine max HOM05D001678 ORTHO05D001698 3.1e-30 136.0 163 47.9
Glyma.14G219200 Glycine max HOM05D001678 ORTHO05D001698 9.1e-30 134.4 160 49.4
Glyma.09G096200 Glycine max HOM05D001678 ORTHO05D001698 1.2e-29 134.0 162 49.4
Lj4C317T2 Lonicera japonica HOM05D000034 ORTHO05D001698 1.5e-29 133.7 138 57.2
Lj3C974T6 Lonicera japonica HOM05D000034 ORTHO05D001698 7.7e-29 131.3 138 56.5
Glyma.07G133600 Glycine max HOM05D001678 ORTHO05D001698 1.3e-28 130.6 158 48.1
Glyma.01G021800 Glycine max HOM05D001678 ORTHO05D001698 1.7e-28 130.2 158 47.5
Glyma.17G190600 Glycine max HOM05D001678 ORTHO05D001698 1.7e-28 130.2 158 48.1
Prupe.8G061600 Prunus persica HOM05D001678 ORTHO05D001698 1.9e-27 126.7 161 47.8
Glyma.14G191800 Glycine max HOM05D001678 ORTHO05D001698 6.1e-26 121.7 158 46.2
Glyma.10G131100 Glycine max HOM05D001678 ORTHO05D001698 7.9e-26 121.3 163 44.2
Glyma.01G111800 Glycine max HOM05D001678 ORTHO05D001698 5.2e-25 118.6 158 46.2
Glyma.17G148300 Glycine max HOM05D001678 ORTHO05D001698 6.7e-25 118.2 158 44.9
Glyma.08G208800 Glycine max HOM05D001678 ORTHO05D001698 1.5e-24 117.1 145 46.9
Medtr1g106600 Medicago truncatula HOM05D001678 ORTHO05D001698 2.0e-24 116.7 167 43.7
Medtr1g106608 Medicago truncatula HOM05D001678 ORTHO05D001698 2.0e-24 116.7 167 43.7
TPR.G8361 Trifolium pratense HOM05D001678 ORTHO05D001698 2.6e-24 116.3 152 46.7
Medtr6g018520 Medicago truncatula HOM05D001678 ORTHO05D001698 5.7e-24 115.2 167 43.1
Medtr6g025650 Medicago truncatula HOM05D001678 ORTHO05D001698 5.7e-24 115.2 167 43.1
Glyma.10G128600 Glycine max HOM05D001678 ORTHO05D001698 2.2e-23 113.2 140 47.9
Lj2A433T12 Lonicera japonica HOM05D001678 ORTHO05D001698 1.8e-22 110.2 114 55.3
Prupe.4G168300 Prunus persica HOM05D001678 ORTHO05D001698 1.6e-21 107.1 159 42.1
Lj6A398T11 Lonicera japonica HOM05D001678 ORTHO05D001698 1.0e-20 104.4 186 37.6
Lj8A161T43 Lonicera japonica HOM05D001678 ORTHO05D001698 2.2e-20 103.2 109 55.0
Prupe.1G170700 Prunus persica HOM05D001678 ORTHO05D001698 2.2e-20 103.2 158 41.1
Prupe.1G177900 Prunus persica HOM05D001678 ORTHO05D001698 2.2e-20 103.2 89 61.8
Lj3C1037T5 Lonicera japonica HOM05D001678 ORTHO05D001698 9.4e-19 97.8 158 39.9
Prupe.4G156100 Prunus persica HOM05D001678 ORTHO05D001698 2.1e-18 96.7 165 42.4
Atru.chr7.11 Acer truncatum HOM05D000034 ORTHO05D000037 3.6e-18 95.9 164 38.4
RcHm_v2.0_Chr4g0409291 Rosa chinensis HOM05D001678 ORTHO05D001698 3.6e-18 95.9 159 39.6
FAN14G3339 Fragaria x ananassa HOM05D001678 ORTHO05D001698 4.7e-18 95.5 163 38.0
FvH4_6g20420 Fragaria vesca HOM05D000034 ORTHO05D001698 1.8e-17 93.6 163 37.4
Medtr3g097540 Medicago truncatula HOM05D001678 ORTHO05D001698 2.3e-17 93.2 147 40.1
RcHm_v2.0_Chr6g0281401 Rosa chinensis HOM05D001678 ORTHO05D001698 3.0e-17 92.8 159 40.3
FvH4_2g00551 Fragaria vesca HOM05D001678 ORTHO05D001698 4.0e-17 92.4 163 36.8
RcHm_v2.0_Chr6g0297421 Rosa chinensis HOM05D001678 ORTHO05D001698 7.5e-16 88.2 143 40.6
Prupe.5G010600 Prunus persica HOM05D001678 ORTHO05D001698 1.7e-15 87.0 156 40.4
Prupe.7G073100 Prunus persica HOM05D001678 ORTHO05D001698 3.7e-15 85.9 162 35.8
Atru.chr12.2214 Acer truncatum HOM05D001678 ORTHO05D001698 1.4e-14 84.0 164 36.0
FAN12G1326 Fragaria x ananassa HOM05D001678 ORTHO05D001698 9.1e-14 81.3 157 35.0
FAN08G3647 Fragaria x ananassa HOM05D001678 ORTHO05D001698 1.2e-13 80.9 166 39.2
FAN10G0526 Fragaria x ananassa HOM05D001678 ORTHO05D001698 1.2e-13 80.9 166 39.2
FvH4_6g24700 Fragaria vesca HOM05D001678 ORTHO05D001698 1.6e-13 80.5 166 39.2
FvH4_4g17330 Fragaria vesca HOM05D001678 ORTHO05D001698 2.0e-13 80.1 157 35.0
RcHm_v2.0_Chr3g0476481 Rosa chinensis HOM05D001678 ORTHO05D001698 2.0e-13 80.1 163 35.0
Prupe.7G052500 Prunus persica HOM05D001678 ORTHO05D001698 3.5e-13 79.3 161 37.3
FAN12G3116 Fragaria x ananassa HOM05D001678 ORTHO05D001698 1.7e-12 77.0 157 34.4
FAN23G0320 Fragaria x ananassa HOM05D001678 ORTHO05D001698 1.7e-12 77.0 157 34.4
FAN24G2506 Fragaria x ananassa HOM05D001678 ORTHO05D001698 2.2e-12 76.6 166 36.7
FAN09G4289 Fragaria x ananassa HOM05D001678 ORTHO05D001698 2.9e-12 76.3 166 38.0
FAN01G1612 Fragaria x ananassa HOM05D001678 ORTHO05D001698 3.8e-12 75.9 163 34.4
FAN26G0826 Fragaria x ananassa HOM05D001678 ORTHO05D001698 1.1e-11 74.3 124 40.3
FAN26G1256 Fragaria x ananassa HOM05D001678 ORTHO05D001698 1.1e-11 74.3 124 40.3
FvH4_2g33311 Fragaria vesca HOM05D001678 ORTHO05D001698 1.5e-11 73.9 166 36.1
FAN04G1238 Fragaria x ananassa HOM05D001678 ORTHO05D001698 1.5e-11 73.9 157 31.8
FAN13G1605 Fragaria x ananassa HOM05D001678 ORTHO05D001698 2.5e-11 73.2 164 34.1
Oeu051357.1 Olea europaea HOM05D001678 ORTHO05D001698 7.2e-11 71.6 175 32.6
TPR.G27895 Trifolium pratense HOM05D001678 ORTHO05D001698 7.2e-11 71.6 80 47.5
FAN03G1731 Fragaria x ananassa HOM05D001678 ORTHO05D001698 1.2e-10 70.9 166 36.1
Atru.chr2.502 Acer truncatum HOM05D001678 ORTHO05D001698 1.6e-10 70.5 148 34.5
MD08G1125600 Malus domestica HOM05D001678 ORTHO05D001698 1.6e-10 70.5 155 33.5
Medtr0002s1240 Medicago truncatula HOM05D001678 ORTHO05D001698 1.6e-10 70.5 116 36.2
Medtr0002s1260 Medicago truncatula HOM05D001678 ORTHO05D001698 1.6e-10 70.5 116 36.2
Atru.chr6.779 Acer truncatum HOM05D001678 ORTHO05D001698 1.0e-09 67.8 126 37.3
Lj1C89T9 Lonicera japonica HOM05D001678 ORTHO05D001698 6.8e-09 65.1 184 33.2
RcHm_v2.0_Chr7g0220391 Rosa chinensis HOM05D001678 ORTHO05D001698 5.7e-08 62.0 167 35.3
RcHm_v2.0_Chr5g0019361 Rosa chinensis HOM05D001678 ORTHO05D001698 9.8e-08 61.2 123 35.8
MD03G1206200 Malus domestica HOM05D001678 ORTHO05D001698 1.3e-07 60.8 174 33.9
FAN02G2409 Fragaria x ananassa HOM05D001678 ORTHO05D001698 1.7e-07 60.5 159 30.2
TPR.G1126 Trifolium pratense HOM05D000336 ORTHO05D002301 3.7e-07 59.3 89 40.4
Atru.chr6.809 Acer truncatum HOM05D001678 ORTHO05D001698 4.8e-07 58.9 69 43.5
Atru.chr4.878 Acer truncatum HOM05D001678 ORTHO05D001698 8.3e-07 58.2 76 39.5
SalBow3G4530 Salvia bowleyana HOM05D001678 ORTHO05D001698 8.3e-07 58.2 163 29.4
Prupe.1G229800 Prunus persica HOM05D001678 ORTHO05D001698 1.1e-06 57.8 167 31.1
Prupe.7G084200 Prunus persica HOM05D001678 ORTHO05D001698 5.4e-06 55.5 35 71.4
Atru.chr5.2760 Acer truncatum HOM05D001678 ORTHO05D001698 9.1e-06 54.7 89 37.1


User provided reference genes

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