Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr9.2195 Acer truncatum HOM05D002450 ORTHO05D002953 1.8e-87 325.9 162 100.0
Atru.chr13.809 Acer truncatum HOM05D002450 ORTHO05D002953 4.0e-71 271.6 155 87.7
Ciclev10000177m.g Citrus clementina HOM05D002450 ORTHO05D002953 2.3e-50 202.6 182 60.4
Dinv44973 Davidia involucrata HOM05D002450 ORTHO05D002953 5.0e-37 158.3 182 52.7
Duzib093G1995 Durio zibethinus HOM05D002450 ORTHO05D002953 1.9e-36 156.4 181 49.2
Cfa003416 Carpinus fangiana HOM05D002450 ORTHO05D002953 4.2e-36 155.2 184 50.5
Haze_26082 Corylus avellana HOM05D002450 ORTHO05D002953 4.7e-35 151.8 184 48.9
Dinv39244 Davidia involucrata HOM05D002450 ORTHO05D002953 7.9e-35 151.0 184 50.5
Potri.002G119900 Populus trichocarpa HOM05D002450 ORTHO05D002953 5.1e-34 148.3 179 48.6
Thecc.08G091300 Theobroma cacao HOM05D002450 ORTHO05D002953 5.1e-34 148.3 182 49.5
QL12p037610 Quercus lobata HOM05D002450 ORTHO05D002953 3.3e-33 145.6 181 48.6
COL.COLO4_28529 Corchorus olitorius HOM05D002450 ORTHO05D002953 7.4e-33 144.4 183 49.2
Manes.16G088600 Manihot esculenta HOM05D002450 ORTHO05D002953 7.4e-33 144.4 180 46.1
Prupe.5G007400 Prunus persica HOM05D002450 ORTHO05D002953 1.7e-32 143.3 191 47.6
Manes.03G054700 Manihot esculenta HOM05D002450 ORTHO05D002953 3.7e-32 142.1 181 45.9
Haze_25520 Corylus avellana HOM05D002450 ORTHO05D002953 4.1e-31 138.7 184 47.3
Gorai.002G132700 Gossypium raimondii HOM05D002450 ORTHO05D002953 1.0e-29 134.0 181 46.4
Sabra02G0094400 Salix brachista HOM05D002450 ORTHO05D002953 1.0e-29 134.0 179 44.1
Actinidia10186 Actinidia chinensis HOM05D002450 ORTHO05D002953 1.3e-29 133.7 179 49.2
Actinidia22682 Actinidia chinensis HOM05D002450 ORTHO05D002953 1.3e-29 133.7 179 48.6
Gohir.A01G121000 Gossypium hirsutum HOM05D002450 ORTHO05D002953 1.3e-29 133.7 181 47.0
CiPaw.07G177000 Carya illinoinensis HOM05D002450 ORTHO05D002953 1.7e-29 133.3 178 46.6
MD06G1005900 Malus domestica HOM05D002450 ORTHO05D002953 2.9e-29 132.5 185 46.5
RcHm_v2.0_Chr7g0216291 Rosa chinensis HOM05D002450 ORTHO05D002953 6.5e-29 131.3 190 47.9
Gohir.D01G108500 Gossypium hirsutum HOM05D002450 ORTHO05D002953 8.5e-29 131.0 181 45.9
Sabra14G0011900 Salix brachista HOM05D002450 ORTHO05D002953 7.2e-28 127.9 179 43.6
Cpa.g.sc123.17 Carica papaya HOM05D002450 ORTHO05D002953 1.6e-27 126.7 180 42.8
Cpa.g.sc21.108 Carica papaya HOM05D002450 ORTHO05D002953 1.6e-27 126.7 146 53.4
TAR381G1265 Trochodendron aralioides HOM05D002450 ORTHO05D002953 1.6e-27 126.7 186 46.8
Rhsim07G0221700 Rhododendron simsii HOM05D002450 ORTHO05D002953 2.3e-26 122.9 157 47.8
Duzib041G0010 Durio zibethinus HOM05D002450 ORTHO05D002953 8.8e-26 120.9 177 43.5
Gorai.009G277000 Gossypium raimondii HOM05D002450 ORTHO05D002953 3.3e-25 119.0 199 44.7
TWI74G0610 Tripterygium wilfordii HOM05D002450 ORTHO05D002953 3.3e-25 119.0 175 44.6
Gohir.D05G265200 Gossypium hirsutum HOM05D002450 ORTHO05D002953 9.7e-25 117.5 181 45.3
FvH4_5g25820 Fragaria vesca HOM05D002450 ORTHO05D002953 1.4e-23 113.6 192 42.7
FAN08G0311 Fragaria x ananassa HOM05D002450 ORTHO05D002953 1.4e-23 113.6 192 43.2
FAN13G2461 Fragaria x ananassa HOM05D002450 ORTHO05D002953 1.4e-23 113.6 192 42.7
FAN18G3361 Fragaria x ananassa HOM05D002450 ORTHO05D002953 1.4e-23 113.6 192 42.7
Gohir.A05G263000 Gossypium hirsutum HOM05D002450 ORTHO05D002953 1.4e-23 113.6 200 43.0
TWI77G0253 Tripterygium wilfordii HOM05D002450 ORTHO05D002953 5.3e-23 111.7 179 43.0
FAN04G2208 Fragaria x ananassa HOM05D002450 ORTHO05D002953 7.0e-23 111.3 192 42.2
Oeu012055.1 Olea europaea HOM05D002450 ORTHO05D002953 9.1e-23 110.9 182 41.2
vmacro22069 Vaccinium macrocarpon HOM05D002450 ORTHO05D002953 9.1e-23 110.9 155 45.2
vmacro22793 Vaccinium macrocarpon HOM05D002450 ORTHO05D002953 9.1e-23 110.9 155 45.2
THA.LOC104812586 Tarenaya hassleriana HOM05D002450 ORTHO05D002953 1.6e-22 110.2 183 38.3
Eucgr.C02521 Eucalyptus grandis HOM05D002450 ORTHO05D002953 3.5e-22 109.0 192 40.1
Prupe.6G138300 Prunus persica HOM05D002450 ORTHO05D002953 5.9e-22 108.2 188 41.5
TAR625G0542 Trochodendron aralioides HOM05D002450 ORTHO05D002953 1.0e-21 107.5 190 44.2
Potri.014G018000 Populus trichocarpa HOM05D002450 ORTHO05D002953 1.3e-21 107.1 179 39.1
Sed0009786 Sechium edule HOM05D002450 ORTHO05D002953 2.9e-21 105.9 169 40.8
MELO3C003391.2 Cucumis melo HOM05D002450 ORTHO05D002953 1.5e-20 103.6 171 42.7
Thecc.01G353600 Theobroma cacao HOM05D002450 ORTHO05D002953 1.5e-20 103.6 170 40.6
Lj4C69T6 Lonicera japonica HOM05D002450 ORTHO05D002953 5.5e-20 101.7 182 39.6
Sed0017090 Sechium edule HOM05D002450 ORTHO05D002953 5.5e-20 101.7 171 39.2
Cc10_g05590 Coffea canephora HOM05D002450 ORTHO05D002953 1.6e-19 100.1 178 39.9
Nn1g04614 Nelumbo nucifera HOM05D002450 ORTHO05D002953 2.7e-19 99.4 180 38.3
ClCG09G012130 Citrullus lanatus HOM05D002450 ORTHO05D002953 1.4e-18 97.1 166 41.0
CsaV3_3G049350 Cucumis sativus L. HOM05D002450 ORTHO05D002953 2.6e-17 92.8 171 39.8
Eucgr.F02266 Eucalyptus grandis HOM05D002450 ORTHO05D002953 3.4e-17 92.4 183 39.9
Oeu057366.3 Olea europaea HOM05D002450 ORTHO05D002953 1.3e-16 90.5 185 35.7
ATR0665G484 Amborella trichopoda HOM05D002450 ORTHO05D002953 6.3e-16 88.2 181 34.8
Ca_25258_v3 Cicer arietinum L. HOM05D002450 ORTHO05D002953 8.3e-16 87.8 174 42.0
MBI15_g43330_MAGBIO Magnolia biondii HOM05D002450 ORTHO05D002953 8.3e-16 87.8 185 33.5
Glyma.14G087700 Glycine max HOM05D002450 ORTHO05D002953 1.4e-15 87.0 183 38.3
Psat5g038160 Pisum sativum HOM05D002450 ORTHO05D002953 3.1e-15 85.9 170 40.6
GSVIVG01009365001 Vitis vinifera HOM05D002450 ORTHO05D002953 3.1e-15 85.9 154 37.7
Nn5g30523 Nelumbo nucifera HOM05D002450 ORTHO05D002953 4.1e-15 85.5 180 33.3
Migut.N02766 Erythranthe guttata HOM05D002450 ORTHO05D002953 5.4e-15 85.1 180 37.2
PGR031G3734 Punica granatum HOM05D002450 ORTHO05D002953 7.0e-15 84.7 170 36.5
Sc24g0003290 Simmondsia chinensis HOM05D002450 ORTHO05D002953 7.0e-15 84.7 182 33.5
Phvul.001G026300 Phaseolus vulgaris HOM05D002450 ORTHO05D002953 9.1e-15 84.3 157 40.1
Lj1g0026999 Lotus japonicus HOM05D002450 ORTHO05D002953 1.2e-14 84.0 183 37.7
VMungo0647G0877 Vigna mungo HOM05D002450 ORTHO05D002953 1.6e-14 83.6 184 37.5
Glyma.06G045200 Glycine max HOM05D002450 ORTHO05D002953 7.7e-14 81.3 187 38.0
Glyma.17G236600 Glycine max HOM05D002450 ORTHO05D002953 7.7e-14 81.3 185 37.3
Lsat_1_v5_gn_4_130920 Lactuca sativa HOM05D002450 ORTHO05D002953 1.3e-13 80.5 145 40.0
SalBow1G6445 Salvia bowleyana HOM05D002450 ORTHO05D002953 1.7e-13 80.1 182 33.0
Hund26558 Selenicereus undatus HOM05D002450 ORTHO05D002953 2.2e-13 79.7 181 34.8
TPR.G33705 Trifolium pratense HOM05D002450 ORTHO05D002953 3.8e-13 79.0 174 38.5
arahy.Tifrunner.gnm1.ann1.94F500 Arachis hypogaea HOM05D002450 ORTHO05D002953 1.1e-12 77.4 183 37.7
arahy.Tifrunner.gnm1.ann1.27GD0X Arachis hypogaea HOM05D002450 ORTHO05D002953 1.5e-12 77.0 155 39.4
TPR.G35644 Trifolium pratense HOM05D002450 ORTHO05D002953 1.5e-12 77.0 181 38.1
AT5G43130 Arabidopsis thaliana HOM05D002450 ORTHO05D002953 1.9e-12 76.6 181 31.5
TPR.G2904 Trifolium pratense HOM05D002450 ORTHO05D002953 2.5e-12 76.3 179 39.7
Lalb_Chr24g0399411 Lupinus albus HOM05D002450 ORTHO05D002953 3.2e-12 75.9 183 36.6
PGSC0003DMG401021510 Solanum tuberosum HOM05D002450 ORTHO05D002953 4.2e-12 75.5 183 32.8
Solyc04g078050.3 Solanum lycopersicum HOM05D002450 ORTHO05D002953 5.5e-12 75.1 183 32.8
Sopen04g031640 Solanum pennellii HOM05D002450 ORTHO05D002953 5.5e-12 75.1 183 32.8
Thhalv10003149m.g Eutrema salsugineum HOM05D002450 ORTHO05D002953 9.5e-12 74.3 181 32.6
Glyma.04G044700 Glycine max HOM05D002450 ORTHO05D002953 1.2e-11 73.9 187 35.3
Sp2g07910 Schrenkiella parvula HOM05D002450 ORTHO05D002953 6.1e-11 71.6 181 33.1
ECA232G4701 Erigeron canadensis HOM05D002450 ORTHO05D002953 1.0e-10 70.9 123 39.8
Nitab4.5_0000197g0090 Nicotiana tabacum HOM05D002450 ORTHO05D002953 1.4e-10 70.5 184 32.1
Peaxi162Scf00081g01329 Petunia axillaris HOM05D002450 ORTHO05D002953 1.4e-10 70.5 181 33.1
Nitab4.5_0000934g0090 Nicotiana tabacum HOM05D002450 ORTHO05D002953 2.3e-10 69.7 177 32.8
CANSAT54G1944 Cannabis sativa HOM05D002450 ORTHO05D002953 3.0e-10 69.3 151 34.4
Lj5g0004805 Lotus japonicus HOM05D002450 ORTHO05D002953 3.0e-10 69.3 153 37.9
arahy.Tifrunner.gnm1.ann1.Z5BLZE Arachis hypogaea HOM05D002450 ORTHO05D002953 6.8e-10 68.2 155 37.4
Aqoxy1G00817 Aquilegia oxysepala HOM05D002450 ORTHO05D002953 1.5e-09 67.0 127 36.2
AL8G17530 Arabidopsis lyrata HOM05D002450 ORTHO05D002953 3.4e-09 65.9 181 31.5
CARHR180850 Cardamine hirsuta HOM05D002450 ORTHO05D002953 3.4e-09 65.9 181 28.7
Aqoxy2G03346 Aquilegia oxysepala HOM05D002450 ORTHO05D002953 5.7e-09 65.1 125 35.2
BolC7t43088H Brassica oleracea HOM05D002450 ORTHO05D002953 7.5e-09 64.7 178 32.6
Lj4A760T36 Lonicera japonica HOM05D002450 ORTHO05D002953 9.8e-09 64.3 154 33.1
CAN.G1054.28 Capsicum annuum HOM05D002450 ORTHO05D002953 1.3e-08 63.9 97 40.2
C07p25690 Brassica napus HOM05D002450 ORTHO05D002953 1.7e-08 63.5 178 32.0
Nitab4.5_0003228g0010 Nicotiana tabacum HOM05D002450 ORTHO05D002953 3.7e-08 62.4 175 32.6
BcaC06g34680 Brassica carinata HOM05D002450 ORTHO05D002953 1.1e-07 60.8 178 31.5
A06p48030 Brassica napus HOM05D002450 ORTHO05D002953 1.1e-07 60.8 178 32.0
DCAR_012809 Daucus carota HOM05D002450 ORTHO05D002953 1.1e-07 60.8 110 38.2
Rhsim06G0060700 Rhododendron simsii HOM05D002450 ORTHO05D002953 1.4e-07 60.5 161 32.9
ECA232G4759 Erigeron canadensis HOM05D002450 ORTHO05D002953 3.1e-07 59.3 143 30.8
MBI14_g43560_MAGBIO Magnolia biondii HOM05D002450 ORTHO05D002953 3.1e-07 59.3 183 32.2
RcHm_v2.0_Chr1g0327781 Rosa chinensis HOM05D002450 ORTHO05D002953 3.1e-07 59.3 111 41.4
BraA06t27673Z Brassica rapa HOM05D002450 ORTHO05D002953 7.0e-07 58.2 178 31.5
Peaxi162Scf00039g03111 Petunia axillaris HOM05D002954 ORTHO05D003353 7.0e-07 58.2 88 43.2
DCAR_008851 Daucus carota HOM05D002450 ORTHO05D002953 1.2e-06 57.4 149 34.2
Lsat_1_v5_gn_1_124901 Lactuca sativa HOM05D000929 ORTHO05D002953 4.5e-06 55.5 140 35.7


User provided reference genes

Program Settings