Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr8.1601 Acer truncatum HOM05D006439 ORTHO05D008152 3.3e-278 961.1 486 100.0
Thecc.05G084500 Theobroma cacao HOM05D006439 ORTHO05D008152 3.3e-193 678.7 482 71.2
GSVIVG01033817001 Vitis vinifera HOM05D006439 ORTHO05D008152 2.8e-184 649.0 491 68.2
Gorai.007G371000 Gossypium raimondii HOM05D006439 ORTHO05D008152 2.0e-182 642.9 482 67.4
Gohir.D11G340900 Gossypium hirsutum HOM05D006439 ORTHO05D008152 5.8e-182 641.3 482 67.2
Cfa016567 Carpinus fangiana HOM05D006439 ORTHO05D008152 8.4e-181 637.5 482 68.5
QL07p039851 Quercus lobata HOM05D006439 ORTHO05D008152 6.0e-179 631.3 484 67.8
Prupe.7G115000 Prunus persica HOM05D006439 ORTHO05D008152 1.5e-177 626.7 482 65.8
MD12G1021400 Malus domestica HOM05D006439 ORTHO05D008152 9.6e-177 624.0 482 65.1
RcHm_v2.0_Chr3g0472491 Rosa chinensis HOM05D006439 ORTHO05D008152 9.6e-177 624.0 484 65.7
CiPaw.09G010200 Carya illinoinensis HOM05D006439 ORTHO05D008152 9.0e-175 617.5 483 66.0
Psat3g034720 Pisum sativum HOM05D006439 ORTHO05D008152 5.5e-172 608.2 486 63.4
TWI74G0883 Tripterygium wilfordii HOM05D006439 ORTHO05D008152 7.1e-172 607.8 487 63.9
Lalb_Chr01g0018261 Lupinus albus HOM05D006439 ORTHO05D008152 9.3e-172 607.4 484 64.0
FvH4_6g18170 Fragaria vesca HOM05D006439 ORTHO05D008152 1.8e-170 603.2 485 62.5
Manes.08G022900 Manihot esculenta HOM05D006439 ORTHO05D008152 3.3e-169 599.0 470 65.7
Lj1g0012097 Lotus japonicus HOM05D006439 ORTHO05D008152 5.6e-169 598.2 486 62.8
Glyma.03G192900 Glycine max HOM05D006439 ORTHO05D008152 1.6e-168 596.7 486 62.3
TPR.G19544 Trifolium pratense HOM05D006439 ORTHO05D008152 1.6e-168 596.7 485 63.7
FAN02G3052 Fragaria x ananassa HOM05D006439 ORTHO05D008152 3.7e-168 595.5 484 62.2
Medtr7g104170 Medicago truncatula HOM05D006439 ORTHO05D008152 1.2e-166 590.5 486 62.6
Hma1.2p1_0232F.1_g097640 Hydrangea macrophylla HOM05D006439 ORTHO05D008152 2.0e-166 589.7 485 63.3
arahy.Tifrunner.gnm1.ann1.YQ8CLY Arachis hypogaea HOM05D006439 ORTHO05D008152 8.4e-165 584.3 506 60.7
Phvul.001G188000 Phaseolus vulgaris HOM05D006439 ORTHO05D008152 2.1e-163 579.7 486 60.5
VMungo1383G0775 Vigna mungo HOM05D006439 ORTHO05D008152 6.0e-163 578.2 486 60.7
arahy.Tifrunner.gnm1.ann1.JQB9X3 Arachis hypogaea HOM05D006439 ORTHO05D008152 1.8e-162 576.6 512 59.4
Sc07g0005420 Simmondsia chinensis HOM05D006439 ORTHO05D008152 1.1e-159 567.4 483 59.4
FAN14G3294 Fragaria x ananassa HOM05D006439 ORTHO05D008152 2.0e-158 563.1 505 57.6
Gohir.A11G321900 Gossypium hirsutum HOM05D006439 ORTHO05D008152 1.7e-157 560.1 425 66.8
Ca_08981_v3 Cicer arietinum L. HOM05D006439 ORTHO05D008152 2.7e-155 552.7 431 64.5
Haze_19565 Corylus avellana HOM05D006439 ORTHO05D008152 2.7e-155 552.7 484 62.6
Duzib093G0471 Durio zibethinus HOM05D006439 ORTHO05D008152 1.1e-151 540.8 490 59.2
Cc06_g05440 Coffea canephora HOM05D006439 ORTHO05D008152 1.1e-148 530.8 485 57.1
Oeu034357.1 Olea europaea HOM05D006439 ORTHO05D008152 7.2e-148 528.1 485 56.9
THA.LOC104823488 Tarenaya hassleriana HOM05D006439 ORTHO05D008152 9.4e-148 527.7 482 55.0
TAR623G1631 Trochodendron aralioides HOM05D006439 ORTHO05D008152 3.6e-147 525.8 489 59.5
Migut.L01768 Erythranthe guttata HOM05D006439 ORTHO05D008152 1.0e-146 524.2 485 56.9
ECA233G3232 Erigeron canadensis HOM05D006439 ORTHO05D008152 1.5e-145 520.4 487 55.4
EL10Ac7g16960 Beta vulgaris HOM05D006439 ORTHO05D008152 4.4e-145 518.8 506 53.2
HanXRQChr09g0247281 Helianthus annuus HOM05D006439 ORTHO05D008152 4.4e-145 518.8 484 55.2
Sopen10g035010 Solanum pennellii HOM05D006439 ORTHO05D008152 1.8e-143 513.5 482 54.8
Lsat_1_v5_gn_6_69500 Lactuca sativa HOM05D006439 ORTHO05D008152 1.5e-142 510.4 488 54.5
Sp4g18660 Schrenkiella parvula HOM05D006439 ORTHO05D008152 7.7e-142 508.1 484 55.4
Solyc10g085600.2 Solanum lycopersicum HOM05D006439 ORTHO05D008152 4.2e-140 502.3 482 53.9
SalBow5G0766 Salvia bowleyana HOM05D006439 ORTHO05D008152 7.2e-140 501.5 494 52.4
Dinv21235 Davidia involucrata HOM05D000103 ORTHO05D008152 3.0e-138 496.1 424 62.3
Aqoxy2G01352 Aquilegia oxysepala HOM05D006439 ORTHO05D008152 5.2e-138 495.4 483 55.1
Thhalv10017885m.g Eutrema salsugineum HOM05D006439 ORTHO05D008152 7.4e-137 491.5 485 53.6
PGR142G3529 Punica granatum HOM05D006439 ORTHO05D008152 5.3e-135 485.3 484 55.0
Cpa.g.sc5.59 Carica papaya HOM05D006439 ORTHO05D008152 9.1e-135 484.6 419 61.1
AL4G32530 Arabidopsis lyrata HOM05D006439 ORTHO05D008152 7.7e-134 481.5 485 53.2
AT2G36370 Arabidopsis thaliana HOM05D006439 ORTHO05D008152 7.7e-134 481.5 485 52.4
Aa31LG5G21550 Aethionema arabicum HOM05D006439 ORTHO05D008152 1.0e-133 481.1 483 54.2
BraA04t18280Z Brassica rapa HOM05D006439 ORTHO05D008152 2.2e-133 479.9 483 52.0
A04p27880 Brassica napus HOM05D006439 ORTHO05D008152 2.9e-133 479.6 482 52.3
Carub.0004s1817 Capsella rubella HOM05D006439 ORTHO05D008152 3.8e-133 479.2 481 53.2
CARHR130670 Cardamine hirsuta HOM05D006439 ORTHO05D008152 6.5e-133 478.4 483 53.4
BolC4t28018H Brassica oleracea HOM05D006439 ORTHO05D008152 9.4e-132 474.6 483 52.0
Nn2g14057 Nelumbo nucifera HOM05D006439 ORTHO05D008152 8.8e-130 468.0 452 56.0
BcaC02g07604 Brassica carinata HOM05D006439 ORTHO05D008152 1.5e-129 467.2 483 51.3
BcaB06g28933 Brassica carinata HOM05D006439 ORTHO05D008152 7.0e-127 458.4 515 48.9
SGA_v2.0_scaffold184G39949 Striga asiatica HOM05D006439 ORTHO05D008152 1.2e-126 457.6 524 48.7
PSO384G3820 Papaver somniferum HOM05D006439 ORTHO05D008152 2.0e-121 440.3 482 50.2
Rhsim04G0133900 Rhododendron simsii HOM05D006439 ORTHO05D008152 4.8e-120 435.6 356 62.4
HPP92_005462 Vanilla planifolia HOM05D006439 ORTHO05D008152 1.2e-118 431.0 476 49.2
Peaxi162Scf00146g00718 Petunia axillaris HOM05D006439 ORTHO05D008152 1.3e-112 411.0 424 51.2
CSS0038647 Camellia sinensis var. sinensis HOM05D006439 ORTHO05D008152 1.0e-106 391.3 291 66.0
DCAR_009146 Daucus carota HOM05D006439 ORTHO05D008152 6.8e-106 388.7 484 45.7
AUR62028585 Chenopodium quinoa HOM05D006439 ORTHO05D008152 5.7e-105 385.6 404 51.7
Actinidia31281 Actinidia chinensis HOM05D006439 ORTHO05D008152 5.9e-102 375.6 354 56.2
Ah.15g091040 Amaranthus hybridus HOM05D006439 ORTHO05D008152 3.9e-101 372.9 448 46.4
Os01g0968600 Oryza sativa ssp. japonica HOM05D006439 ORTHO05D008152 5.0e-101 372.5 484 42.8
vmacro08831 Vaccinium macrocarpon HOM05D006439 ORTHO05D008152 3.6e-99 366.3 325 60.6
CAN.G1099.9 Capsicum annuum HOM05D006439 ORTHO05D008152 5.4e-95 352.4 342 55.0
Ciclev10011131m.g Citrus clementina HOM05D006439 ORTHO05D008152 8.6e-93 345.1 262 69.5
MBI17_g23163_MAGBIO Magnolia biondii HOM05D006439 ORTHO05D008152 6.4e-88 328.9 372 51.3
Nitab4.5_0000381g0240 Nicotiana tabacum HOM05D006439 ORTHO05D008152 9.2e-87 325.1 340 50.6
PSO801G0048 Papaver somniferum HOM05D006439 ORTHO05D008152 2.4e-79 300.4 485 40.8
Lj3A1001T30 Lonicera japonica HOM05D006439 ORTHO05D008152 6.9e-74 282.3 273 58.2
Ciclev10013912m.g Citrus clementina HOM05D006439 ORTHO05D008152 1.0e-69 268.5 172 77.9
Zm00001eb139990 Zea mays HOM05D006439 ORTHO05D008152 1.1e-66 258.5 363 43.3
QL07p039868 Quercus lobata HOM05D006439 ORTHO05D008152 3.4e-57 226.9 198 61.6
PGSC0003DMG402008399 Solanum tuberosum HOM05D006439 ORTHO05D008152 4.9e-56 223.0 171 62.6
SMO238G0046 Selaginella moellendorffii HOM05D006439 ORTHO05D008152 3.5e-54 216.9 439 33.5
AagrBONN_evm.TU.Sc2ySwM_117.1948 Anthoceros agrestis HOM05D006439 ORTHO05D008152 7.9e-54 215.7 469 33.5
Pp3c16_1040 Physcomitrium patens HOM05D006439 ORTHO05D008152 9.6e-52 208.8 495 31.9
SEGI_26522 Sequoiadendron giganteum HOM05D006439 ORTHO05D000001 2.5e-44 184.1 221 45.7
Mapoly0116s0006 Marchantia polymorpha HOM05D006439 ORTHO05D008152 5.9e-41 172.9 484 29.3
CAN.G1099.8 Capsicum annuum HOM05D006439 ORTHO05D008152 3.2e-39 167.2 127 62.2
Nitab4.5_0000381g0270 Nicotiana tabacum HOM05D006502 ORTHO05D007704 1.4e-37 161.8 128 61.7
FAN09G3024 Fragaria x ananassa HOM05D006439 ORTHO05D008152 5.9e-33 146.4 158 49.4
Lj3A1001T31 Lonicera japonica HOM05D006439 ORTHO05D008152 1.7e-32 144.8 97 71.1
AUR62028586 Chenopodium quinoa HOM05D006439 ORTHO05D008152 6.7e-29 132.9 95 62.1
SEGI_37059 Sequoiadendron giganteum HOM05D006439 ORTHO05D008152 9.7e-28 129.0 130 46.9
Thecc.10G111400 Theobroma cacao HOM05D006439 ORTHO05D008152 8.0e-22 109.4 76 68.4
Lj3A1001T29 Lonicera japonica HOM05D006439 ORTHO05D008152 4.8e-19 100.1 98 56.1
CSS0006664 Camellia sinensis var. sinensis HOM05D006439 ORTHO05D008152 5.3e-18 96.7 91 56.0
SEGI_31112 Sequoiadendron giganteum HOM05D006439 ORTHO05D008152 7.0e-18 96.3 143 42.0
SEGI_02684 Sequoiadendron giganteum HOM05D006439 ORTHO05D008152 5.9e-17 93.2 102 45.1
AUR62033535 Chenopodium quinoa HOM05D006439 ORTHO05D008152 6.5e-16 89.7 87 47.1
ECA232G2349 Erigeron canadensis HOM05D006439 ORTHO05D008321 1.3e-08 65.5 236 28.4
Psat6g076200 Pisum sativum HOM05D006439 ORTHO05D008152 2.2e-08 64.7 47 59.6
QL11p043997 Quercus lobata HOM05D006439 ORTHO05D008152 8.5e-08 62.8 67 50.7
CSS0045256 Camellia sinensis var. sinensis HOM05D006439 ORTHO05D008152 1.9e-07 61.6 48 64.6
Sabra03G0131300 Salix brachista HOM05D001219 ORTHO05D001017 2.7e-06 57.8 351 22.8


User provided reference genes

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