Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr7.741 Acer truncatum HOM05D004186 ORTHO05D006965 6.8e-284 979.9 477 100.0
Hma1.2p1_1261F.1_g271200 Hydrangea macrophylla HOM05D004186 ORTHO05D006965 5.6e-254 880.6 475 90.3
Sed0027081 Sechium edule HOM05D004186 ORTHO05D006965 1.6e-253 879.0 477 88.1
GSVIVG01029114001 Vitis vinifera HOM05D004186 ORTHO05D006965 2.1e-253 878.6 479 89.1
TWI32G0580 Tripterygium wilfordii HOM05D004186 ORTHO05D006965 3.1e-252 874.8 477 87.4
Prupe.1G091900 Prunus persica HOM05D004186 ORTHO05D006965 6.8e-252 873.6 478 87.2
Dinv42759 Davidia involucrata HOM05D004186 ORTHO05D006965 1.2e-251 872.8 480 87.5
Dinv43343 Davidia involucrata HOM05D004186 ORTHO05D006965 1.2e-251 872.8 480 87.5
Duzib034G0005 Durio zibethinus HOM05D004186 ORTHO05D006965 2.0e-251 872.1 475 87.8
Duzib128G0608 Durio zibethinus HOM05D004186 ORTHO05D006965 2.6e-251 871.7 475 87.6
CSS0041373 Camellia sinensis var. sinensis HOM05D004186 ORTHO05D006965 3.4e-251 871.3 477 87.0
TAR625G0733 Trochodendron aralioides HOM05D004186 ORTHO05D006965 3.4e-251 871.3 480 87.5
Thecc.10G167400 Theobroma cacao HOM05D004186 ORTHO05D006965 1.3e-250 869.4 475 87.4
FvH4_4g32520 Fragaria vesca HOM05D004186 ORTHO05D006965 8.4e-250 866.7 477 85.7
Potri.018G096049 Populus trichocarpa HOM05D004186 ORTHO05D006965 8.4e-250 866.7 478 86.0
TAR636G1430 Trochodendron aralioides HOM05D004186 ORTHO05D006965 8.4e-250 866.7 480 86.9
Duzib114G0309 Durio zibethinus HOM05D004186 ORTHO05D006965 1.1e-249 866.3 475 87.2
CsaV3_2G008080 Cucumis sativus L. HOM05D004186 ORTHO05D006965 1.4e-249 865.9 477 86.0
RcHm_v2.0_Chr4g0403601 Rosa chinensis HOM05D004186 ORTHO05D006965 1.9e-249 865.5 477 85.7
MD16G1265900 Malus domestica HOM05D004186 ORTHO05D006965 4.1e-249 864.4 478 86.2
CANSAT11G0657 Cannabis sativa HOM05D004186 ORTHO05D006965 5.4e-249 864.0 477 85.5
PSO063G2639 Papaver somniferum HOM05D004186 ORTHO05D006965 7.1e-249 863.6 478 86.6
CiPaw.08G037900 Carya illinoinensis HOM05D004186 ORTHO05D006965 9.2e-249 863.2 478 86.2
FAN12G1387 Fragaria x ananassa HOM05D004186 ORTHO05D006965 9.2e-249 863.2 481 85.4
Gohir.A05G280700 Gossypium hirsutum HOM05D004186 ORTHO05D006965 2.7e-248 861.7 475 85.9
Manes.06G027600 Manihot esculenta HOM05D004186 ORTHO05D006965 3.5e-248 861.3 478 85.6
Gorai.009G296100 Gossypium raimondii HOM05D004186 ORTHO05D006965 4.6e-248 860.9 475 85.9
HanXRQChr05g0136751 Helianthus annuus HOM05D004186 ORTHO05D006965 4.6e-248 860.9 483 85.5
Oeu054233.2 Olea europaea HOM05D004186 ORTHO05D006965 6.0e-248 860.5 479 85.8
Gohir.D05G282700 Gossypium hirsutum HOM05D004186 ORTHO05D006965 3.9e-247 857.8 473 85.6
RhsimUnG0079700 Rhododendron simsii HOM05D004186 ORTHO05D006965 3.9e-247 857.8 485 85.4
Cpa.g.sc95.75 Carica papaya HOM05D004186 ORTHO05D006965 6.6e-247 857.1 477 84.9
ECA236G4107 Erigeron canadensis HOM05D004186 ORTHO05D006965 6.6e-247 857.1 479 85.6
MELO3C004075.2 Cucumis melo HOM05D004186 ORTHO05D006965 1.9e-246 855.5 477 84.7
Lsat_1_v5_gn_8_66460 Lactuca sativa HOM05D004186 ORTHO05D006965 2.5e-246 855.1 479 84.8
Cc06_g13640 Coffea canephora HOM05D004186 ORTHO05D006965 4.3e-246 854.4 479 85.0
Migut.J01448 Erythranthe guttata HOM05D004186 ORTHO05D006965 4.3e-246 854.4 478 84.7
ClCG11G012460 Citrullus lanatus HOM05D004186 ORTHO05D006965 7.3e-246 853.6 477 84.7
PSO782G1691 Papaver somniferum HOM05D004186 ORTHO05D006965 7.3e-246 853.6 478 86.2
QL02p096850 Quercus lobata HOM05D004186 ORTHO05D006965 7.3e-246 853.6 476 84.9
CiPaw.07G189100 Carya illinoinensis HOM05D004186 ORTHO05D006965 9.6e-246 853.2 477 85.1
Ciclev10008154m.g Citrus clementina HOM05D004186 ORTHO05D006965 9.6e-246 853.2 478 84.9
SGA_v2.0_scaffold69G23283 Striga asiatica HOM05D004186 ORTHO05D006965 9.6e-246 853.2 479 85.4
DCAR_017956 Daucus carota HOM05D004186 ORTHO05D006965 3.6e-245 851.3 478 84.3
Sopen07g002760 Solanum pennellii HOM05D004186 ORTHO05D006965 3.6e-245 851.3 475 85.1
Rhsim01G0008400 Rhododendron simsii HOM05D004186 ORTHO05D006965 6.2e-245 850.5 483 84.9
Solyc07g006650.4 Solanum lycopersicum HOM05D004186 ORTHO05D006965 8.1e-245 850.1 472 85.2
Cpa.g.sc75.2 Carica papaya HOM05D004186 ORTHO05D006965 1.8e-244 849.0 477 83.6
PGSC0003DMG400027477 Solanum tuberosum HOM05D004186 ORTHO05D006965 5.2e-244 847.4 475 85.3
Lalb_Chr11g0072331 Lupinus albus HOM05D004186 ORTHO05D006965 1.5e-243 845.9 478 85.4
TPR.G5301 Trifolium pratense HOM05D004186 ORTHO05D006965 4.4e-243 844.3 478 84.3
Actinidia04122 Actinidia chinensis HOM05D004186 ORTHO05D006965 7.6e-243 843.6 478 83.7
Manes.02G134800 Manihot esculenta HOM05D004186 ORTHO05D006965 1.7e-242 842.4 478 83.1
Nitab4.5_0001212g0070 Nicotiana tabacum HOM05D004186 ORTHO05D006965 1.7e-242 842.4 442 89.6
Sp6g19340 Schrenkiella parvula HOM05D004186 ORTHO05D006965 1.7e-242 842.4 478 83.5
Migut.K00260 Erythranthe guttata HOM05D004186 ORTHO05D006965 2.2e-242 842.0 479 84.1
Nitab4.5_0000244g0180 Nicotiana tabacum HOM05D004186 ORTHO05D006965 2.2e-242 842.0 443 89.2
Thhalv10013406m.g Eutrema salsugineum HOM05D004186 ORTHO05D006965 3.8e-242 841.3 479 83.7
BraA10t43588Z Brassica rapa HOM05D004186 ORTHO05D006965 1.1e-241 839.7 473 83.5
COL.COLO4_09973 Corchorus olitorius HOM05D004186 ORTHO05D006965 1.1e-241 839.7 475 84.6
Ca_21198_v3 Cicer arietinum L. HOM05D004186 ORTHO05D006965 1.9e-241 839.0 478 84.1
Lj9A689G39 Lonicera japonica HOM05D004186 ORTHO05D006965 2.4e-241 838.6 458 86.5
C09p49530 Brassica napus HOM05D004186 ORTHO05D006965 3.2e-241 838.2 471 83.9
Phvul.003G148700 Phaseolus vulgaris HOM05D004186 ORTHO05D006965 5.4e-241 837.4 478 84.9
A10p15060 Brassica napus HOM05D004186 ORTHO05D006965 7.1e-241 837.0 473 83.1
BcaC04g19942 Brassica carinata HOM05D004186 ORTHO05D006965 9.3e-241 836.6 471 83.7
Lj4g0000380 Lotus japonicus HOM05D004186 ORTHO05D006965 9.3e-241 836.6 478 83.7
Carub.0008s1816 Capsella rubella HOM05D004186 ORTHO05D006965 1.2e-240 836.3 478 82.6
Eucgr.G01193 Eucalyptus grandis HOM05D004186 ORTHO05D006965 3.5e-240 834.7 493 81.1
BcaB08g36123 Brassica carinata HOM05D004186 ORTHO05D006965 4.6e-240 834.3 471 83.2
VMungo1215G1034 Vigna mungo HOM05D004186 ORTHO05D006965 1.0e-239 833.2 478 84.3
AT5G57655 Arabidopsis thaliana HOM05D004186 ORTHO05D006965 1.7e-239 832.4 478 82.0
MSTRG.19694 Avicennia marina HOM05D004186 ORTHO05D006965 3.0e-239 831.6 476 82.4
SalBow6G3740 Salvia bowleyana HOM05D004186 ORTHO05D006965 6.6e-239 830.5 485 82.1
AL8G33680 Arabidopsis lyrata HOM05D004186 ORTHO05D006965 8.7e-239 830.1 471 82.8
BolC9t57806H Brassica oleracea HOM05D004186 ORTHO05D006965 1.5e-238 829.3 479 82.3
CAN.G584.24 Capsicum annuum HOM05D004186 ORTHO05D006965 1.9e-238 828.9 477 83.4
Glyma.17G066200 Glycine max HOM05D004186 ORTHO05D006965 1.9e-238 828.9 478 83.7
EL10Ac8g18262 Beta vulgaris HOM05D004186 ORTHO05D006965 3.3e-238 828.2 475 84.0
arahy.Tifrunner.gnm1.ann1.CAM23Q Arachis hypogaea HOM05D004186 ORTHO05D006965 2.8e-237 825.1 478 83.3
Aa31LG3G13490 Aethionema arabicum HOM05D004186 ORTHO05D006965 8.1e-237 823.5 486 81.1
HPP92_013702 Vanilla planifolia HOM05D004186 ORTHO05D006965 8.1e-237 823.5 475 83.2
AUR62039990 Chenopodium quinoa HOM05D004186 ORTHO05D006965 1.1e-236 823.2 472 83.7
Sc08g0005470 Simmondsia chinensis HOM05D004186 ORTHO05D006965 1.1e-236 823.2 478 82.0
CARHR271410 Cardamine hirsuta HOM05D004186 ORTHO05D006965 4.0e-236 821.2 479 81.2
Medtr4g128840 Medicago truncatula HOM05D004186 ORTHO05D006965 5.3e-236 820.8 479 82.0
FAN22G1241 Fragaria x ananassa HOM05D004186 ORTHO05D006965 6.9e-236 820.5 490 81.2
Os07g0669100 Oryza sativa ssp. japonica HOM05D004186 ORTHO05D006965 6.9e-236 820.5 480 81.5
AUR62040296 Chenopodium quinoa HOM05D004186 ORTHO05D006965 1.2e-235 819.7 472 83.3
THA.LOC104813530 Tarenaya hassleriana HOM05D004186 ORTHO05D006965 1.5e-235 819.3 478 82.2
ATR0580G261 Amborella trichopoda HOM05D004186 ORTHO05D006965 2.6e-235 818.5 474 82.3
Psat0ss9363g0320 Pisum sativum HOM05D004186 ORTHO05D006965 3.4e-235 818.1 473 83.1
CDE04G0897 Ceratophyllum demersum HOM05D004186 ORTHO05D006965 1.7e-234 815.8 476 83.2
Peaxi162Scf00942g00127 Petunia axillaris HOM05D004186 ORTHO05D006965 2.9e-234 815.1 477 83.9
Zm00001eb330180 Zea mays HOM05D004186 ORTHO05D006965 1.1e-233 813.1 461 83.3
Ah.14g083970 Amaranthus hybridus HOM05D004186 ORTHO05D006965 1.7e-231 805.8 478 81.6
Zm00001eb111020 Zea mays HOM05D004186 ORTHO05D006965 2.3e-231 805.4 457 83.4
arahy.Tifrunner.gnm1.ann1.YY53PU Arachis hypogaea HOM05D004186 ORTHO05D006965 2.9e-226 788.5 503 77.5
Gohir.A06G175800 Gossypium hirsutum HOM05D004186 ORTHO05D006965 4.3e-222 774.6 475 77.9
FAN07G2198 Fragaria x ananassa HOM05D004186 ORTHO05D006965 1.3e-221 773.1 498 76.5
Haze_22131 Corylus avellana HOM05D004186 ORTHO05D006965 1.4e-220 769.6 505 76.4
Hund26412 Selenicereus undatus HOM05D004186 ORTHO05D006965 4.0e-220 768.1 454 81.9
MBI14_g39543_MAGBIO Magnolia biondii HOM05D004186 ORTHO05D006965 1.1e-217 760.0 477 77.6
arahy.Tifrunner.gnm1.ann1.QC9P0E Arachis hypogaea HOM05D004186 ORTHO05D006965 6.7e-215 750.7 478 76.4
arahy.Tifrunner.gnm1.ann1.WFV6V5 Arachis hypogaea HOM05D004186 ORTHO05D006965 2.5e-214 748.8 478 76.2
vmacro13097 Vaccinium macrocarpon HOM05D004186 ORTHO05D006965 3.7e-213 745.0 497 75.9
Nn2g12639 Nelumbo nucifera HOM05D004186 ORTHO05D006965 1.6e-208 729.6 480 76.0
Mapoly0030s0071 Marchantia polymorpha HOM05D004186 ORTHO05D006965 8.2e-205 717.2 468 72.2
Pp3c6_6020 Physcomitrium patens HOM05D004186 ORTHO05D006965 9.0e-204 713.8 475 72.0
AagrBONN_evm.TU.Sc2ySwM_228.4505 Anthoceros agrestis HOM05D004186 ORTHO05D006965 7.7e-203 710.7 471 72.8
Dinv41278 Davidia involucrata HOM05D004186 ORTHO05D006965 7.7e-203 710.7 383 86.7
SMO259G0020 Selaginella moellendorffii HOM05D004186 ORTHO05D006965 1.5e-198 696.4 469 70.8
Oeu052240.1 Olea europaea HOM05D004186 ORTHO05D006965 6.3e-189 664.5 482 69.7
unitig_26.g9078 Utricularia gibba HOM05D004186 ORTHO05D006965 1.8e-188 662.9 463 72.4
Gohir.D06G185466 Gossypium hirsutum HOM05D004186 ORTHO05D006965 2.2e-178 629.4 367 78.5
Gorai.010G217000 Gossypium raimondii HOM05D004186 ORTHO05D006965 4.0e-175 618.6 367 77.9
Hund09010 Selenicereus undatus HOM05D004186 ORTHO05D006965 2.2e-173 612.8 456 67.8
Aqoxy7G03142 Aquilegia oxysepala HOM05D004186 ORTHO05D006965 3.2e-169 599.0 479 64.5
SalBow6G1169 Salvia bowleyana HOM05D004186 ORTHO05D006965 3.6e-152 542.3 341 78.0
arahy.Tifrunner.gnm1.ann1.6S67WQ Arachis hypogaea HOM05D004186 ORTHO05D006965 1.3e-146 523.9 281 89.0
Zm00001eb347580 Zea mays HOM05D004186 ORTHO05D006965 1.7e-146 523.5 304 80.6
arahy.Tifrunner.gnm1.ann1.LBE3WY Arachis hypogaea HOM05D004186 ORTHO05D006965 3.3e-145 519.2 275 89.5
Zm00001eb059010 Zea mays HOM05D004186 ORTHO05D006965 8.3e-141 504.6 304 78.9
MCO08G279 Micromonas commoda HOM05D004186 ORTHO05D006965 7.1e-140 501.5 410 61.5
PRCOL_00002845 Prasinoderma coloniale HOM05D004186 ORTHO05D006965 8.1e-136 488.0 439 54.9
MD13G1265000 Malus domestica HOM05D004186 ORTHO05D006965 2.2e-125 453.4 306 72.9
Zm00001eb194710 Zea mays HOM05D004186 ORTHO05D006965 6.4e-125 451.8 304 72.4
TWI34G1113 Tripterygium wilfordii HOM05D004186 ORTHO05D006965 4.5e-110 402.5 211 91.0
SEGI_37950 Sequoiadendron giganteum HOM05D004186 ORTHO05D006965 2.4e-103 380.2 255 72.5
SEGI_15575 Sequoiadendron giganteum HOM05D004186 ORTHO05D006965 7.6e-102 375.2 228 77.6
SEGI_36533 Sequoiadendron giganteum HOM05D004186 ORTHO05D006965 7.6e-102 375.2 228 77.6
BcaC03g14138 Brassica carinata HOM05D004186 ORTHO05D032859 3.9e-98 362.8 416 48.8
MD13G1264900 Malus domestica HOM05D004186 ORTHO05D006965 2.9e-93 346.7 200 84.5
BolC2t07527H Brassica oleracea HOM05D004186 ORTHO05D032859 1.8e-90 337.4 463 44.7
C02p14070 Brassica napus HOM05D004186 ORTHO05D032859 1.9e-76 290.8 427 42.9
SalBow6G2747 Salvia bowleyana HOM05D004186 ORTHO05D015971 1.5e-68 264.6 147 81.0
A02p08350 Brassica napus HOM05D004186 ORTHO05D015971 2.3e-66 257.3 179 67.0
BraA02t05904Z Brassica rapa HOM05D004186 ORTHO05D015971 1.5e-65 254.6 179 66.5
arahy.Tifrunner.gnm1.ann1.P4UX3D Arachis hypogaea HOM05D004186 ORTHO05D015971 2.8e-64 250.4 169 71.6
arahy.Tifrunner.gnm1.ann1.NDN785 Arachis hypogaea HOM05D004186 ORTHO05D015971 2.4e-63 247.3 169 71.0
A02p08340 Brassica napus HOM05D004186 ORTHO05D006965 1.4e-47 194.9 111 82.9
Rhsim01G0008600 Rhododendron simsii HOM05D004186 ORTHO05D015971 1.6e-46 191.4 99 83.8
RhsimUnG0079500 Rhododendron simsii HOM05D004186 ORTHO05D015971 1.6e-46 191.4 99 83.8
FAN17G2491 Fragaria x ananassa HOM05D004186 ORTHO05D006965 4.6e-38 163.3 95 86.3
SMO181G0029 Selaginella moellendorffii HOM05D004186 ORTHO05D006965 1.7e-37 161.4 105 72.4
HanXRQChr09g0269751 Helianthus annuus HOM05D004186 ORTHO05D015971 3.3e-36 157.1 97 76.3
RcHm_v2.0_Chr5g0046871 Rosa chinensis HOM05D004186 ORTHO05D015971 5.4e-31 139.8 77 80.5
TAR383G0623 Trochodendron aralioides HOM05D004186 ORTHO05D415797 1.9e-28 131.3 84 71.4
RcHm_v2.0_Chr5g0036521 Rosa chinensis HOM05D004186 ORTHO05D015971 2.1e-27 127.9 77 76.6
Zm00001eb265380 Zea mays HOM05D004186 ORTHO05D008381 1.7e-21 108.2 56 87.5
Ah.08g214930 Amaranthus hybridus HOM05D004186 ORTHO05D061406 5.1e-21 106.7 135 41.5
Zm00001eb101000 Zea mays HOM05D004186 ORTHO05D000030 1.2e-19 102.1 65 69.2
Zm00001eb140760 Zea mays HOM05D004186 ORTHO05D003061 5.8e-17 93.2 72 68.1
Zm00001eb349350 Zea mays HOM05D004186 ORTHO05D006965 5.8e-17 93.2 72 68.1
Atru.chr3.336 Acer truncatum HOM05D004186 ORTHO05D006037 4.1e-15 87.0 103 52.4
C02p54480 Brassica napus HOM05D003206 ORTHO05D016781 5.4e-15 86.7 75 53.3
SalBow7G3706 Salvia bowleyana HOM05D004186 ORTHO05D352404 9.2e-15 85.9 72 62.5
Sc14g0005990 Simmondsia chinensis HOM05D004186 ORTHO05D039000 2.1e-14 84.7 54 72.2
EL10Ac2g04384 Beta vulgaris HOM05D004186 ORTHO05D039000 2.1e-11 74.7 35 91.4
SGA_v2.0_scaffold66G22476 Striga asiatica HOM05D004186 ORTHO05D405288 8.4e-08 62.8 34 85.3
BcaC01g06364 Brassica carinata HOM05D004186 ORTHO05D011383 2.7e-06 57.8 81 39.5
C03p16540 Brassica napus HOM05D004186 ORTHO05D011383 3.5e-06 57.4 85 37.6
C08p17140 Brassica napus HOM05D004186 ORTHO05D011383 4.6e-06 57.0 55 49.1
BolC8t49341H Brassica oleracea HOM05D004186 ORTHO05D011383 4.6e-06 57.0 55 49.1
HanXRQChr10g0284771 Helianthus annuus HOM05D004748 ORTHO05D005825 6.0e-06 56.6 62 51.6
Lsat_1_v5_gn_0_38501 Lactuca sativa HOM05D002067 ORTHO05D002244 7.8e-06 56.2 60 50.0


User provided reference genes

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