Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr7.434 Acer truncatum HOM05D005378 ORTHO05D006986 2.1e-61 238.8 120 100.0
Atru.chr9.1492 Acer truncatum HOM05D005378 ORTHO05D006986 1.0e-47 193.4 108 89.8
Atru.chr1.3076 Acer truncatum HOM05D005378 ORTHO05D006986 2.3e-47 192.2 118 83.9
Atru.chr3.15 Acer truncatum HOM05D000534 ORTHO05D000389 2.0e-46 189.1 106 92.5
Dinv37717 Davidia involucrata HOM05D005378 ORTHO05D006986 5.3e-44 181.0 108 84.3
Cfa012056 Carpinus fangiana HOM05D005378 ORTHO05D006986 2.0e-43 179.1 108 82.4
Sabra03G0082400 Salix brachista HOM05D005378 ORTHO05D006986 2.0e-43 179.1 108 83.3
CANSAT21G0731 Cannabis sativa HOM05D005378 ORTHO05D006986 2.6e-43 178.7 108 83.3
Haze_09001 Corylus avellana HOM05D005378 ORTHO05D006986 2.6e-43 178.7 108 82.4
Potri.001G113800 Populus trichocarpa HOM05D005378 ORTHO05D006986 2.6e-43 178.7 108 83.3
Ca_12295_v3 Cicer arietinum L. HOM05D005378 ORTHO05D006986 1.7e-42 176.0 108 80.6
THA.LOC104818281 Tarenaya hassleriana HOM05D005378 ORTHO05D006986 1.7e-42 176.0 108 81.5
Medtr4g101820 Medicago truncatula HOM05D005378 ORTHO05D006986 2.2e-42 175.6 108 79.6
Potri.003G118400 Populus trichocarpa HOM05D005378 ORTHO05D006986 2.2e-42 175.6 108 82.4
TPR.G37594 Trifolium pratense HOM05D005378 ORTHO05D006986 2.2e-42 175.6 108 79.6
Thecc.03G266200 Theobroma cacao HOM05D005378 ORTHO05D006986 3.8e-42 174.9 108 82.4
Eucgr.E00505 Eucalyptus grandis HOM05D005378 ORTHO05D006986 5.0e-42 174.5 108 80.6
Glyma.05G055000 Glycine max HOM05D005378 ORTHO05D006986 5.0e-42 174.5 108 80.6
Lalb_Chr05g0225201 Lupinus albus HOM05D005378 ORTHO05D006986 6.5e-42 174.1 108 79.6
Phvul.003G217000 Phaseolus vulgaris HOM05D005378 ORTHO05D006986 6.5e-42 174.1 108 81.5
CARHR012800 Cardamine hirsuta HOM05D005378 ORTHO05D006986 8.5e-42 173.7 117 74.4
Manes.02G028800 Manihot esculenta HOM05D005378 ORTHO05D006986 8.5e-42 173.7 108 79.6
AL1G23870 Arabidopsis lyrata HOM05D005378 ORTHO05D006986 1.1e-41 173.3 117 74.4
Ciclev10021134m.g Citrus clementina HOM05D005378 ORTHO05D006986 1.1e-41 173.3 108 80.6
Cc08_g13620 Coffea canephora HOM05D005378 ORTHO05D006986 1.1e-41 173.3 108 79.6
arahy.Tifrunner.gnm1.ann1.1K1ZSN Arachis hypogaea HOM05D005378 ORTHO05D006986 1.4e-41 172.9 108 80.6
arahy.Tifrunner.gnm1.ann1.2GQ0W5 Arachis hypogaea HOM05D005378 ORTHO05D006986 1.4e-41 172.9 108 80.6
Rhsim10G0118700 Rhododendron simsii HOM05D005378 ORTHO05D006986 1.4e-41 172.9 108 80.6
VMungo0251G1120 Vigna mungo HOM05D005378 ORTHO05D006986 1.4e-41 172.9 108 79.6
GSVIVG01019902001 Vitis vinifera HOM05D005378 ORTHO05D006986 1.4e-41 172.9 108 80.6
CSS0049222 Camellia sinensis var. sinensis HOM05D005378 ORTHO05D006986 1.9e-41 172.6 106 82.1
Carub.0001s1221 Capsella rubella HOM05D005378 ORTHO05D006986 2.5e-41 172.2 108 79.6
Sabra01G0087000 Salix brachista HOM05D005378 ORTHO05D006986 4.2e-41 171.4 108 81.5
PGSC0003DMG400003914 Solanum tuberosum HOM05D005378 ORTHO05D006986 4.2e-41 171.4 108 79.6
CiPaw.11G143700 Carya illinoinensis HOM05D005378 ORTHO05D006986 5.5e-41 171.0 108 78.7
Duzib205G1930 Durio zibethinus HOM05D005378 ORTHO05D006986 5.5e-41 171.0 108 80.6
Prupe.5G084900 Prunus persica HOM05D005378 ORTHO05D006986 5.5e-41 171.0 108 80.6
Lj4g0009345 Lotus japonicus HOM05D005378 ORTHO05D006986 7.2e-41 170.6 108 78.7
Psat4g069440 Pisum sativum HOM05D005378 ORTHO05D006986 7.2e-41 170.6 108 78.7
FAN08G1559 Fragaria x ananassa HOM05D005378 ORTHO05D006986 1.2e-40 169.9 108 79.6
Gorai.004G205500 Gossypium raimondii HOM05D005378 ORTHO05D006986 1.2e-40 169.9 108 80.6
Oeu001912.1 Olea europaea HOM05D005378 ORTHO05D006986 1.2e-40 169.9 108 77.8
TAR629G1125 Trochodendron aralioides HOM05D005378 ORTHO05D006986 1.2e-40 169.9 108 77.8
BcaB08g34272 Brassica carinata HOM05D005378 ORTHO05D006986 1.6e-40 169.5 108 75.9
DCAR_006775 Daucus carota HOM05D005378 ORTHO05D006986 1.6e-40 169.5 108 76.9
Gohir.A08G176000 Gossypium hirsutum HOM05D005378 ORTHO05D006986 1.6e-40 169.5 108 79.6
Gohir.D08G194800 Gossypium hirsutum HOM05D005378 ORTHO05D006986 1.6e-40 169.5 108 79.6
Solyc08g079830.4 Solanum lycopersicum HOM05D005378 ORTHO05D006986 1.6e-40 169.5 108 78.7
MSTRG.12037 Avicennia marina HOM05D005378 ORTHO05D006986 2.1e-40 169.1 108 76.9
FvH4_5g01090 Fragaria vesca HOM05D005378 ORTHO05D006986 2.1e-40 169.1 108 79.6
FAN18G4319 Fragaria x ananassa HOM05D005378 ORTHO05D006986 2.1e-40 169.1 108 79.6
PGR042G0099 Punica granatum HOM05D005378 ORTHO05D006986 2.1e-40 169.1 108 76.9
Sopen08g028190 Solanum pennellii HOM05D005378 ORTHO05D006986 2.1e-40 169.1 108 78.7
Hma1.2p1_2135F.1_g314860 Hydrangea macrophylla HOM05D005378 ORTHO05D006986 2.7e-40 168.7 108 78.7
MSTRG.25561 Avicennia marina HOM05D005378 ORTHO05D006986 3.6e-40 168.3 108 78.7
Aa31LG2G450 Aethionema arabicum HOM05D005378 ORTHO05D006986 4.7e-40 167.9 108 75.9
AT1G12520 Arabidopsis thaliana HOM05D005378 ORTHO05D006986 6.1e-40 167.5 108 77.8
BcaB03g13183 Brassica carinata HOM05D005378 ORTHO05D006986 6.1e-40 167.5 108 77.8
CAN.G630.23 Capsicum annuum HOM05D005378 ORTHO05D006986 6.1e-40 167.5 108 77.8
CsaV3_3G003410 Cucumis sativus L. HOM05D005378 ORTHO05D006986 7.9e-40 167.2 108 76.9
SalBow6G7208 Salvia bowleyana HOM05D005378 ORTHO05D006986 7.9e-40 167.2 108 76.9
MD04G1072900 Malus domestica HOM05D005378 ORTHO05D006986 1.0e-39 166.8 108 75.9
HanXRQChr02g0047721 Helianthus annuus HOM05D005378 ORTHO05D006986 1.4e-39 166.4 108 77.8
QL12p016275 Quercus lobata HOM05D005378 ORTHO05D006986 1.8e-39 166.0 108 76.9
Sed0008997 Sechium edule HOM05D005378 ORTHO05D006986 1.8e-39 166.0 108 77.8
Aqoxy7G00527 Aquilegia oxysepala HOM05D005378 ORTHO05D006986 2.3e-39 165.6 108 76.9
Peaxi162Scf00620g00241 Petunia axillaris HOM05D005378 ORTHO05D006986 2.3e-39 165.6 108 75.0
Cpa.g.sc29.47 Carica papaya HOM05D005378 ORTHO05D006986 3.0e-39 165.2 108 76.9
Nitab4.5_0012494g0030 Nicotiana tabacum HOM05D005378 ORTHO05D006986 3.0e-39 165.2 108 75.9
SGA_v2.0_scaffold37G14872 Striga asiatica HOM05D005378 ORTHO05D006986 3.9e-39 164.9 108 75.0
C08p15470 Brassica napus HOM05D005378 ORTHO05D006986 5.1e-39 164.5 109 78.0
BolC8t49175H Brassica oleracea HOM05D005378 ORTHO05D006986 5.1e-39 164.5 109 78.0
Nn6g34347 Nelumbo nucifera HOM05D005378 ORTHO05D006986 5.1e-39 164.5 108 77.8
RcHm_v2.0_Chr7g0200231 Rosa chinensis HOM05D005378 ORTHO05D006986 5.1e-39 164.5 108 76.9
Migut.A00880 Erythranthe guttata HOM05D005378 ORTHO05D006986 6.7e-39 164.1 108 75.0
Nitab4.5_0005167g0010 Nicotiana tabacum HOM05D005378 ORTHO05D006986 6.7e-39 164.1 108 75.0
Sp1g11100 Schrenkiella parvula HOM05D005378 ORTHO05D006986 6.7e-39 164.1 108 75.9
A08p32790 Brassica napus HOM05D005378 ORTHO05D006986 8.8e-39 163.7 109 78.0
BraA08t35202Z Brassica rapa HOM05D005378 ORTHO05D006986 8.8e-39 163.7 109 78.0
Thhalv10008232m.g Eutrema salsugineum HOM05D005378 ORTHO05D006986 8.8e-39 163.7 108 76.9
PGR031G2614 Punica granatum HOM05D005378 ORTHO05D006986 8.8e-39 163.7 108 74.1
Lsat_1_v5_gn_6_10640 Lactuca sativa HOM05D005378 ORTHO05D006986 2.0e-38 162.5 108 75.9
BcaC07g41696 Brassica carinata HOM05D005378 ORTHO05D006986 3.3e-38 161.8 108 75.0
BolC8t52274H Brassica oleracea HOM05D005378 ORTHO05D006986 3.3e-38 161.8 108 75.0
MD00G1069800 Malus domestica HOM05D005378 ORTHO05D006986 4.4e-38 161.4 108 73.1
Hund14698 Selenicereus undatus HOM05D005378 ORTHO05D006986 4.4e-38 161.4 108 76.9
TWI60G1116 Tripterygium wilfordii HOM05D005378 ORTHO05D006986 5.7e-38 161.0 108 73.1
C08p47320 Brassica napus HOM05D005378 ORTHO05D006986 7.4e-38 160.6 108 74.1
ClCG00G000130 Citrullus lanatus HOM05D005378 ORTHO05D006986 1.3e-37 159.8 108 76.9
ClCG10G003380 Citrullus lanatus HOM05D005378 ORTHO05D006986 1.3e-37 159.8 108 76.9
ECA233G4179 Erigeron canadensis HOM05D005378 ORTHO05D006986 1.3e-37 159.8 108 74.1
Oeu001910.1 Olea europaea HOM05D005378 ORTHO05D006986 1.3e-37 159.8 108 73.1
Zm00001eb073490 Zea mays HOM05D005378 ORTHO05D006986 1.3e-37 159.8 108 73.1
EL10Ac5g12674 Beta vulgaris HOM05D005378 ORTHO05D006986 1.7e-37 159.5 108 75.9
ATR0757G076 Amborella trichopoda HOM05D005378 ORTHO05D006986 2.8e-37 158.7 108 73.1
A09p63820 Brassica napus HOM05D005378 ORTHO05D006986 3.7e-37 158.3 108 73.1
BraA09t41728Z Brassica rapa HOM05D005378 ORTHO05D006986 3.7e-37 158.3 108 73.1
PSO782G2812 Papaver somniferum HOM05D005378 ORTHO05D006986 3.7e-37 158.3 108 75.0
SEGI_32640 Sequoiadendron giganteum HOM05D005378 ORTHO05D006986 3.7e-37 158.3 108 71.3
Sc01g0008970 Simmondsia chinensis HOM05D005378 ORTHO05D006986 3.7e-37 158.3 108 74.1
Lj2A203G52 Lonicera japonica HOM05D005378 ORTHO05D006986 4.8e-37 157.9 134 65.7
PSO478G1428 Papaver somniferum HOM05D005378 ORTHO05D006986 1.1e-36 156.8 108 75.0
FAN13G1015 Fragaria x ananassa HOM05D005378 ORTHO05D006986 5.3e-36 154.5 108 75.0
Ah.12g057930 Amaranthus hybridus HOM05D005378 ORTHO05D006986 1.5e-35 152.9 108 71.3
AUR62010552 Chenopodium quinoa HOM05D005378 ORTHO05D006986 1.7e-34 149.4 119 67.2
AUR62017340 Chenopodium quinoa HOM05D005378 ORTHO05D006986 2.9e-34 148.7 119 67.2
MELO3C014007.2 Cucumis melo HOM05D005378 ORTHO05D006986 2.9e-34 148.7 120 68.3
Actinidia02066 Actinidia chinensis HOM05D005378 ORTHO05D006986 3.2e-33 145.2 104 71.2
Mapoly0127s0018 Marchantia polymorpha HOM05D005378 ORTHO05D006986 5.5e-33 144.4 108 66.7
COL.COLO4_23814 Corchorus olitorius HOM05D005378 ORTHO05D006986 9.4e-33 143.7 104 69.2
HPP92_021079 Vanilla planifolia HOM05D005378 ORTHO05D006986 3.6e-32 141.7 108 65.7
CDE01G0558 Ceratophyllum demersum HOM05D005378 ORTHO05D006986 1.0e-31 140.2 108 64.8
Atru.chr3.3516 Acer truncatum HOM05D005378 ORTHO05D006986 2.3e-31 139.0 75 93.3
AagrBONN_evm.TU.Sc2ySwM_228.1340 Anthoceros agrestis HOM05D005378 ORTHO05D006986 2.3e-31 139.0 108 62.0
SMO201G0146 Selaginella moellendorffii HOM05D005378 ORTHO05D006986 5.2e-31 137.9 109 66.1
Os04g0573200 Oryza sativa ssp. japonica HOM05D005378 ORTHO05D006986 1.7e-29 132.9 96 68.8
Pp3c21_8100 Physcomitrium patens HOM05D005378 ORTHO05D006986 1.7e-29 132.9 108 58.3
Pp3c18_10490 Physcomitrium patens HOM05D005378 ORTHO05D006986 1.1e-28 130.2 105 59.0
unitig_744.g24326 Utricularia gibba HOM05D005378 ORTHO05D006986 1.6e-27 126.3 89 67.4
CBR_g27778 Chara braunii HOM05D005378 ORTHO05D006986 2.0e-22 109.4 108 50.9
Atru.chr5.2888 Acer truncatum HOM05D005378 ORTHO05D037884 2.7e-19 99.0 58 84.5
BolC4t24476H Brassica oleracea HOM05D005378 ORTHO05D006986 2.7e-19 99.0 64 73.4
Actinidia14494 Actinidia chinensis HOM05D005378 ORTHO05D006986 1.3e-18 96.7 63 74.6
Atru.chr6.1840 Acer truncatum HOM05D005378 ORTHO05D037884 5.5e-17 91.3 49 89.8
unitig_22.g5478 Utricularia gibba HOM05D002871 ORTHO05D003307 1.6e-11 73.2 81 49.4
TAR374G0182 Trochodendron aralioides HOM05D005378 ORTHO05D006986 6.1e-08 61.2 106 36.8
BcaC06g31923 Brassica carinata HOM05D005378 ORTHO05D006986 1.2e-06 57.0 53 56.6
BcaC04g22737 Brassica carinata HOM05D005378 ORTHO05D006986 7.5e-06 54.3 35 68.6
C09p15780 Brassica napus HOM05D005378 ORTHO05D006986 7.5e-06 54.3 35 68.6
BolC9t54490H Brassica oleracea HOM05D005378 ORTHO05D006986 7.5e-06 54.3 35 68.6


User provided reference genes

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