Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr7.1801 Acer truncatum HOM05D000528 ORTHO05D000999 2.9e-91 338.6 172 100.0
Ciclev10007246m.g Citrus clementina HOM05D000528 ORTHO05D000999 1.3e-67 260.0 172 77.3
Duzib150G1295 Durio zibethinus HOM05D000528 ORTHO05D000999 2.2e-67 259.2 172 74.4
Thecc.09G067600 Theobroma cacao HOM05D000528 ORTHO05D000999 2.7e-65 252.3 172 74.4
Potri.006G216900 Populus trichocarpa HOM05D000528 ORTHO05D000999 6.0e-65 251.1 172 73.3
Sabra06G0167300 Salix brachista HOM05D000528 ORTHO05D000999 3.0e-64 248.8 172 72.1
TPR.G12643 Trifolium pratense HOM05D000528 ORTHO05D000999 7.3e-63 244.2 172 72.1
Prupe.7G189500 Prunus persica HOM05D000528 ORTHO05D000999 6.2e-62 241.1 172 72.1
Gorai.009G039300 Gossypium raimondii HOM05D000528 ORTHO05D000999 8.1e-62 240.7 172 70.9
COL.COLO4_21179 Corchorus olitorius HOM05D000528 ORTHO05D000999 6.9e-61 237.7 172 69.2
Gohir.D05G038800 Gossypium hirsutum HOM05D000528 ORTHO05D000999 6.9e-61 237.7 172 69.8
Manes.03G054900 Manihot esculenta HOM05D000528 ORTHO05D000999 6.9e-61 237.7 172 71.5
Cfa021584 Carpinus fangiana HOM05D000528 ORTHO05D000999 2.0e-60 236.1 172 71.5
Glyma.13G115800 Glycine max HOM05D000528 ORTHO05D000999 5.8e-60 234.6 172 71.5
TAR626G1794 Trochodendron aralioides HOM05D000528 ORTHO05D000999 5.8e-60 234.6 172 66.3
ClCG05G002580 Citrullus lanatus HOM05D000528 ORTHO05D000999 7.6e-60 234.2 172 69.2
CsaV3_3G010020 Cucumis sativus L. HOM05D000528 ORTHO05D000999 9.9e-60 233.8 172 69.2
Gohir.A05G037300 Gossypium hirsutum HOM05D000528 ORTHO05D000999 1.3e-59 233.4 172 68.6
Lalb_Chr12g0200411 Lupinus albus HOM05D000528 ORTHO05D000999 2.9e-59 232.3 172 71.5
Gohir.D07G018100 Gossypium hirsutum HOM05D000528 ORTHO05D000999 8.4e-59 230.7 172 66.3
Lalb_Chr07g0181491 Lupinus albus HOM05D000528 ORTHO05D000999 8.4e-59 230.7 172 69.8
Ca_21350_v3 Cicer arietinum L. HOM05D000528 ORTHO05D000999 1.1e-58 230.3 172 69.2
Lj4g0008783 Lotus japonicus HOM05D000528 ORTHO05D000999 1.1e-58 230.3 172 69.2
TWI34G0978 Tripterygium wilfordii HOM05D000528 ORTHO05D000999 1.1e-58 230.3 172 69.8
Glyma.17G044000 Glycine max HOM05D000528 ORTHO05D000999 1.4e-58 229.9 172 70.3
Dinv25491 Davidia involucrata HOM05D000528 ORTHO05D000999 1.9e-58 229.6 172 69.8
Gohir.A07G018300 Gossypium hirsutum HOM05D000528 ORTHO05D000999 1.9e-58 229.6 172 66.3
Sed0018294 Sechium edule HOM05D000528 ORTHO05D000999 1.9e-58 229.6 172 66.9
Gorai.001G018700 Gossypium raimondii HOM05D000528 ORTHO05D000999 2.4e-58 229.2 172 65.7
Dinv42440 Davidia involucrata HOM05D000528 ORTHO05D000999 3.2e-58 228.8 172 68.6
Sed0012879 Sechium edule HOM05D000528 ORTHO05D000999 4.2e-58 228.4 172 68.6
MD15G1225500 Malus domestica HOM05D000528 ORTHO05D000999 7.1e-58 227.6 172 68.6
MD02G1105600 Malus domestica HOM05D000528 ORTHO05D000999 1.2e-57 226.9 172 68.6
TWI63G0826 Tripterygium wilfordii HOM05D000528 ORTHO05D000999 1.6e-57 226.5 172 68.0
FvH4_1g09670 Fragaria vesca HOM05D000528 ORTHO05D000999 2.1e-57 226.1 172 69.8
FAN26G1955 Fragaria x ananassa HOM05D000528 ORTHO05D000999 2.1e-57 226.1 172 69.8
FAN26G3208 Fragaria x ananassa HOM05D000528 ORTHO05D000999 2.1e-57 226.1 172 69.8
GSVIVG01014993001 Vitis vinifera HOM05D000528 ORTHO05D000999 2.1e-57 226.1 172 68.6
CANSAT56G4237 Cannabis sativa HOM05D000528 ORTHO05D000999 2.7e-57 225.7 172 68.0
Manes.16G088500 Manihot esculenta HOM05D000528 ORTHO05D000999 2.7e-57 225.7 172 69.2
RcHm_v2.0_Chr2g0096511 Rosa chinensis HOM05D000528 ORTHO05D000999 3.5e-57 225.3 172 68.0
FAN28G2848 Fragaria x ananassa HOM05D000528 ORTHO05D000999 4.6e-57 224.9 172 68.6
Phvul.003G126000 Phaseolus vulgaris HOM05D000528 ORTHO05D000999 6.0e-57 224.6 172 68.6
FAN19G1221 Fragaria x ananassa HOM05D000528 ORTHO05D000999 1.3e-56 223.4 172 69.2
Medtr4g124430 Medicago truncatula HOM05D000528 ORTHO05D000999 8.7e-56 220.7 172 66.9
arahy.Tifrunner.gnm1.ann1.JF9XSQ Arachis hypogaea HOM05D000528 ORTHO05D000999 2.5e-55 219.2 172 68.0
arahy.Tifrunner.gnm1.ann1.Z2MV1Y Arachis hypogaea HOM05D000528 ORTHO05D000999 2.5e-55 219.2 172 68.0
CiPaw.08G000100 Carya illinoinensis HOM05D000528 ORTHO05D000999 2.8e-54 215.7 162 69.8
VMungo1215G1674 Vigna mungo HOM05D000528 ORTHO05D000999 2.8e-54 215.7 172 66.9
Psat4g020000 Pisum sativum HOM05D000528 ORTHO05D000999 1.1e-53 213.8 179 62.6
Eucgr.C00756 Eucalyptus grandis HOM05D000528 ORTHO05D000999 1.8e-53 213.0 171 66.1
Actinidia39603 Actinidia chinensis HOM05D000528 ORTHO05D000999 2.4e-53 212.6 171 64.9
AT3G43300 Arabidopsis thaliana HOM05D000528 ORTHO05D000999 3.1e-53 212.2 170 65.3
AL5G21370 Arabidopsis lyrata HOM05D000528 ORTHO05D000999 9.0e-53 210.7 170 64.7
Thhalv10002369m.g Eutrema salsugineum HOM05D000528 ORTHO05D000999 5.8e-52 208.0 170 61.8
Sp5g17840 Schrenkiella parvula HOM05D000528 ORTHO05D000999 5.8e-52 208.0 170 63.5
vmacro06378 Vaccinium macrocarpon HOM05D000528 ORTHO05D000999 5.8e-52 208.0 180 62.8
Carub.0005s0916 Capsella rubella HOM05D000528 ORTHO05D000999 7.6e-52 207.6 170 62.9
Nn6g31501 Nelumbo nucifera HOM05D000528 ORTHO05D000999 2.2e-51 206.1 172 66.3
CARHR153370 Cardamine hirsuta HOM05D000528 ORTHO05D000999 2.9e-51 205.7 170 62.9
MBI13_g05971_MAGBIO Magnolia biondii HOM05D000528 ORTHO05D000999 1.1e-50 203.8 172 61.0
PSO017G2681 Papaver somniferum HOM05D000528 ORTHO05D000999 2.4e-50 202.6 172 60.5
Aqoxy6G02695 Aquilegia oxysepala HOM05D000528 ORTHO05D000999 3.2e-50 202.2 172 60.5
Lj1A1154G40 Lonicera japonica HOM05D000528 ORTHO05D000999 3.2e-50 202.2 164 67.1
BcaB02g10779 Brassica carinata HOM05D000528 ORTHO05D000999 7.1e-50 201.1 170 61.2
DCAR_027484 Daucus carota HOM05D000528 ORTHO05D000999 9.3e-50 200.7 170 59.4
BcaC01g02206 Brassica carinata HOM05D000528 ORTHO05D000999 2.1e-49 199.5 170 60.6
SGA_v2.0_scaffold13G06349 Striga asiatica HOM05D000528 ORTHO05D000999 2.1e-49 199.5 172 61.0
THA.LOC104799601 Tarenaya hassleriana HOM05D000528 ORTHO05D000999 2.1e-49 199.5 170 60.6
SalBow3G2418 Salvia bowleyana HOM05D000528 ORTHO05D000999 2.7e-49 199.1 171 60.8
FAN23G1603 Fragaria x ananassa HOM05D000528 ORTHO05D000999 1.0e-48 197.2 160 65.6
PSO170G1988 Papaver somniferum HOM05D000528 ORTHO05D000999 1.0e-48 197.2 172 61.0
PGR142G1496 Punica granatum HOM05D000528 ORTHO05D000999 1.8e-48 196.4 171 62.0
Cc09_g04400 Coffea canephora HOM05D000528 ORTHO05D000999 2.3e-48 196.1 171 59.6
Sc03g0004600 Simmondsia chinensis HOM05D000528 ORTHO05D000999 8.7e-48 194.1 172 61.6
Migut.F01825 Erythranthe guttata HOM05D000528 ORTHO05D000999 1.1e-47 193.7 171 61.4
AUR62038332 Chenopodium quinoa HOM05D000528 ORTHO05D000999 1.9e-47 193.0 174 58.0
C03p67850 Brassica napus HOM05D000528 ORTHO05D000999 3.3e-47 192.2 178 57.9
BolSC21t60253H Brassica oleracea HOM05D000528 ORTHO05D000999 3.3e-47 192.2 178 57.9
THA.LOC104810976 Tarenaya hassleriana HOM05D000528 ORTHO05D000999 1.6e-46 189.9 170 57.6
EL10Ac9g21127 Beta vulgaris HOM05D000528 ORTHO05D000999 2.8e-46 189.1 176 58.0
ECA234G2762 Erigeron canadensis HOM05D000528 ORTHO05D000999 2.8e-46 189.1 170 58.8
Solyc12g017830.3 Solanum lycopersicum HOM05D000528 ORTHO05D000999 4.8e-46 188.3 174 56.9
A06p26630 Brassica napus HOM05D000528 ORTHO05D000999 6.2e-46 188.0 178 57.3
BraA06t25597Z Brassica rapa HOM05D000528 ORTHO05D000999 1.8e-45 186.4 182 56.0
ATR0006G069 Amborella trichopoda HOM05D000528 ORTHO05D000999 2.4e-45 186.0 177 56.5
MSTRG.27425 Avicennia marina HOM05D000528 ORTHO05D000999 3.1e-45 185.7 170 59.4
HanXRQChr16g0521011 Helianthus annuus HOM05D000528 ORTHO05D000999 3.1e-45 185.7 170 60.0
Aa31LG4G12930 Aethionema arabicum HOM05D000528 ORTHO05D000999 6.9e-45 184.5 151 62.3
Os07g0564700 Oryza sativa ssp. japonica HOM05D000528 ORTHO05D000999 6.9e-45 184.5 172 54.7
DCAR_023798 Daucus carota HOM05D000528 ORTHO05D000999 1.2e-44 183.7 170 58.2
MSTRG.8180 Avicennia marina HOM05D000528 ORTHO05D000999 1.5e-44 183.3 170 56.5
SalBow1G1474 Salvia bowleyana HOM05D000528 ORTHO05D000999 2.6e-44 182.6 171 57.9
Sopen12g008630 Solanum pennellii HOM05D000528 ORTHO05D000999 2.6e-44 182.6 174 55.7
Lsat_1_v5_gn_4_40140 Lactuca sativa HOM05D000528 ORTHO05D000999 4.5e-44 181.8 172 59.3
HPP92_012349 Vanilla planifolia HOM05D000528 ORTHO05D000999 2.9e-43 179.1 172 55.2
Zm00001eb107040 Zea mays HOM05D000528 ORTHO05D000999 2.9e-43 179.1 172 55.2
HanXRQChr01g0017721 Helianthus annuus HOM05D000528 ORTHO05D000999 4.9e-43 178.3 170 57.1
CDE06G2617 Ceratophyllum demersum HOM05D000528 ORTHO05D000999 1.1e-42 177.2 172 55.8
Nitab4.5_0000219g0110 Nicotiana tabacum HOM05D000528 ORTHO05D000999 6.0e-41 171.4 156 59.6
Nitab4.5_0006028g0020 Nicotiana tabacum HOM05D000528 ORTHO05D000999 6.0e-41 171.4 156 59.0
ECA248G1999 Erigeron canadensis HOM05D000528 ORTHO05D000999 3.9e-40 168.7 169 55.6
Peaxi162Scf00006g03411 Petunia axillaris HOM05D000528 ORTHO05D000999 1.5e-39 166.8 164 54.9
Lsat_1_v5_gn_1_84121 Lactuca sativa HOM05D000528 ORTHO05D000999 2.5e-39 166.0 163 55.2
AUR62023914 Chenopodium quinoa HOM05D000528 ORTHO05D000999 1.6e-38 163.3 166 50.6
unitig_699.g19739 Utricularia gibba HOM05D000528 ORTHO05D000999 2.1e-38 162.9 168 54.2
unitig_736.g22501 Utricularia gibba HOM05D000528 ORTHO05D000999 2.1e-38 162.9 172 51.7
Hund00753 Selenicereus undatus HOM05D000528 ORTHO05D000999 4.9e-35 151.8 153 51.6
Hma1.2p1_0179F.1_g079080 Hydrangea macrophylla HOM05D000528 ORTHO05D000999 8.4e-35 151.0 122 65.6
SGA_v2.0_scaffold122G33228 Striga asiatica HOM05D000528 ORTHO05D000999 1.1e-34 150.6 186 48.4
Rhsim05G0000800 Rhododendron simsii HOM05D000528 ORTHO05D000999 2.1e-33 146.4 171 51.5
CSS0007186 Camellia sinensis var. sinensis HOM05D000528 ORTHO05D000999 3.5e-33 145.6 170 53.5
Rhsim02G0256800 Rhododendron simsii HOM05D000528 ORTHO05D000999 1.3e-32 143.7 171 50.9
Pp3c21_12020 Physcomitrium patens HOM05D000528 ORTHO05D000999 2.8e-30 136.0 172 44.8
Oeu007685.1 Olea europaea HOM05D000528 ORTHO05D000999 2.2e-27 126.3 120 58.3
Actinidia33512 Actinidia chinensis HOM05D000528 ORTHO05D000999 4.2e-26 122.1 172 48.3
Pp3c18_8720 Physcomitrium patens HOM05D000528 ORTHO05D000999 1.6e-25 120.2 172 39.5
Pp3c18_8730 Physcomitrium patens HOM05D000528 ORTHO05D000999 1.6e-25 120.2 172 39.5
CBR_g5727 Chara braunii HOM05D000528 ORTHO05D000999 3.9e-24 115.5 166 38.0
Mapoly0003s0171 Marchantia polymorpha HOM05D000528 ORTHO05D000999 1.1e-23 114.0 170 37.6
CAN.G8.14 Capsicum annuum HOM05D000528 ORTHO05D000999 9.7e-23 110.9 125 52.8
Pp3c8_19790 Physcomitrium patens HOM05D000528 ORTHO05D000999 1.7e-22 110.2 171 35.7
AagrBONN_evm.TU.Sc2ySwM_117.2707 Anthoceros agrestis HOM05D000528 ORTHO05D000999 3.4e-20 102.4 166 36.7
AagrBONN_evm.TU.Sc2ySwM_117.2712 Anthoceros agrestis HOM05D000528 ORTHO05D000999 3.4e-20 102.4 166 36.7
Pp3c18_8290 Physcomitrium patens HOM05D000528 ORTHO05D000999 4.5e-20 102.1 174 36.8
CDE07G1894 Ceratophyllum demersum HOM05D000528 ORTHO05D000999 1.3e-19 100.5 125 46.4
Migut.F02072 Erythranthe guttata HOM05D000528 ORTHO05D000999 1.3e-19 100.5 113 52.2
Hma1.2p1_0295F.1_g116740 Hydrangea macrophylla HOM05D000501 ORTHO05D000376 1.6e-17 93.6 51 80.4
Oeu062027.1 Olea europaea HOM05D000113 ORTHO05D010194 7.4e-15 84.7 52 69.2
MELO3C006224.2 Cucumis melo HOM05D000528 ORTHO05D000999 1.1e-10 70.9 45 77.8


User provided reference genes

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