Gene: Nitab4.5_0000219g0110

General Information

Structural Information

  • Species Nicotiana tabacum
  • Gene Identifier Nitab4.5_0000219g0110
  • Transcript Identifier Nitab4.5_0000219g0110.1
  • Gene Type Coding gene
  • Location Nitab4.5_0000219 : 1010967-1056261 : positive

Gene Family Information

  • ID HOM05D000528
  • #Genes/#Species 1033/100
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Nitab4.5_0000219g0110.1
  • SR1-identifier Nta21g08440.1

Descriptions

  • Description Sec7 domain, Domain of unknown function DUF1981, Sec7 associated, Nucleotide-binding, alpha-beta plait, Sec7 domain, alpha orthogonal bundle, RNA recognition motif domain, Armadillo-type fold, Armadillo-like helical
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0032012
IEA
InterProregulation of ARF protein signal transduction
GO:0016192
ISO
PLAZA Integrative Orthologyvesicle-mediated transport AT3G43300
GO:0006955
ISO
PLAZA Integrative Orthologyimmune response AT3G43300
GO:0045087
ISO
PLAZA Integrative Orthologyinnate immune response AT3G43300
GO:0042742
ISO
PLAZA Integrative Orthologydefense response to bacterium AT3G43300

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005085
IEA
InterProguanyl-nucleotide exchange factor activity
GO:0003676
IEA
InterPronucleic acid binding
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G43300

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005769
ISO
PLAZA Integrative Orthologyearly endosome AT3G43300
GO:0005802
ISO
PLAZA Integrative Orthologytrans-Golgi network AT3G43300
GO:0005829
ISO
PLAZA Integrative Orthologycytosol AT3G43300

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000904 Sec7 domain
IPR035979 RNA-binding domain superfamily
IPR015403 Sec7, C-terminal
IPR023394 Sec7, C-terminal domain superfamily
IPR032691 Guanine nucleotide exchange factor, N-terminal
IPR016024 Armadillo-type fold
IPR032629 Mon2, dimerisation and cyclophilin-binding domain
IPR032817 Mon2, C-terminal
IPR035999 Sec7 domain superfamily
IPR000504 RNA recognition motif domain
IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
IPR011989 Armadillo-like helical
Mapman id Description
22.3.2.2.2 Vesicle trafficking.post-Golgi trafficking.coat protein recruiting.ARF-GTPase guanyl-nucleotide exchange.ARF-GEF factor (BIG)