Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr7.1733 Acer truncatum HOM05D006185 ORTHO05D007572 1.2e-109 399.8 190 100.0
Ciclev10009607m.g Citrus clementina HOM05D006185 ORTHO05D007572 3.4e-93 345.1 190 84.2
Dinv25540 Davidia involucrata HOM05D006185 ORTHO05D007572 3.9e-89 331.6 190 80.0
Cpa.g.sc28.15 Carica papaya HOM05D006185 ORTHO05D007572 5.0e-89 331.3 190 79.5
Manes.03G041800 Manihot esculenta HOM05D006185 ORTHO05D007572 1.9e-88 329.3 190 78.9
COL.COLO4_18072 Corchorus olitorius HOM05D006185 ORTHO05D007572 1.2e-87 326.6 190 77.9
Gohir.A05G034500 Gossypium hirsutum HOM05D006185 ORTHO05D007572 6.1e-87 324.3 190 77.9
Duzib187G0940 Durio zibethinus HOM05D006185 ORTHO05D007572 1.8e-86 322.8 190 77.9
QL11p001224 Quercus lobata HOM05D006185 ORTHO05D007572 1.8e-86 322.8 189 79.4
Thecc.09G074200 Theobroma cacao HOM05D006185 ORTHO05D007572 2.3e-86 322.4 190 80.0
Gohir.D05G035900 Gossypium hirsutum HOM05D006185 ORTHO05D007572 5.2e-86 321.2 190 77.4
Gorai.009G036500 Gossypium raimondii HOM05D006185 ORTHO05D007572 5.2e-86 321.2 190 77.4
Duzib150G0101 Durio zibethinus HOM05D006185 ORTHO05D007572 2.6e-85 318.9 190 76.3
TWI63G0883 Tripterygium wilfordii HOM05D006185 ORTHO05D007572 2.6e-85 318.9 190 78.4
CANSAT56G1413 Cannabis sativa HOM05D006185 ORTHO05D007572 5.8e-85 317.8 190 74.2
Peaxi162Scf00928g00132 Petunia axillaris HOM05D006185 ORTHO05D007572 1.7e-84 316.2 187 76.5
Cc06_g12450 Coffea canephora HOM05D006185 ORTHO05D007572 2.9e-84 315.5 190 77.4
Eucgr.C03305 Eucalyptus grandis HOM05D006185 ORTHO05D007572 2.9e-84 315.5 187 74.9
Potri.006G140000 Populus trichocarpa HOM05D006185 ORTHO05D007572 6.4e-84 314.3 190 75.3
ClCG03G014940 Citrullus lanatus HOM05D006185 ORTHO05D007572 1.1e-83 313.5 186 75.8
CANSAT56G0026 Cannabis sativa HOM05D006185 ORTHO05D007572 1.4e-83 313.2 190 73.7
CANSAT56G1917 Cannabis sativa HOM05D006185 ORTHO05D007572 1.4e-83 313.2 191 74.3
Cfa002967 Carpinus fangiana HOM05D006185 ORTHO05D007572 1.9e-83 312.8 189 76.2
Haze_26036 Corylus avellana HOM05D006185 ORTHO05D007572 1.9e-83 312.8 190 75.8
CANSAT56G3530 Cannabis sativa HOM05D006185 ORTHO05D007572 2.4e-83 312.4 191 74.3
CsaV3_1G041210 Cucumis sativus L. HOM05D006185 ORTHO05D007572 2.4e-83 312.4 186 74.2
CiPaw.03G203800 Carya illinoinensis HOM05D006185 ORTHO05D007572 7.0e-83 310.8 190 73.2
THA.LOC104799837 Tarenaya hassleriana HOM05D006185 ORTHO05D007572 1.2e-82 310.1 190 74.2
Nitab4.5_0000073g0300 Nicotiana tabacum HOM05D006185 ORTHO05D007572 2.0e-82 309.3 187 75.4
Sopen12g004130 Solanum pennellii HOM05D006185 ORTHO05D007572 4.6e-82 308.1 186 74.7
Solyc12g009180.2 Solanum lycopersicum HOM05D006185 ORTHO05D007572 7.8e-82 307.4 186 74.2
SalBow5G0266 Salvia bowleyana HOM05D006185 ORTHO05D007572 1.3e-81 306.6 188 75.0
PGSC0003DMG400002903 Solanum tuberosum HOM05D006185 ORTHO05D007572 1.7e-81 306.2 186 73.7
Nitab4.5_0004234g0030 Nicotiana tabacum HOM05D006185 ORTHO05D007572 2.3e-81 305.8 187 73.8
Gorai.010G090200 Gossypium raimondii HOM05D006185 ORTHO05D007572 3.0e-81 305.4 186 74.2
Oeu062247.1 Olea europaea HOM05D006185 ORTHO05D007572 3.0e-81 305.4 192 74.5
CSS0028340 Camellia sinensis var. sinensis HOM05D006185 ORTHO05D007572 3.9e-81 305.1 190 75.3
MELO3C015534.2 Cucumis melo HOM05D006185 ORTHO05D007572 5.0e-81 304.7 205 68.3
ECA236G4868 Erigeron canadensis HOM05D006185 ORTHO05D007572 6.6e-81 304.3 187 74.9
Migut.L01579 Erythranthe guttata HOM05D006185 ORTHO05D007572 6.6e-81 304.3 186 72.6
Thhalv10008865m.g Eutrema salsugineum HOM05D006185 ORTHO05D007572 8.6e-81 303.9 190 72.6
CSS0016181 Camellia sinensis var. sinensis HOM05D006185 ORTHO05D007572 1.1e-80 303.5 188 75.5
AL1G31710 Arabidopsis lyrata HOM05D006185 ORTHO05D007572 1.5e-80 303.1 190 72.6
Lj7A688T82 Lonicera japonica HOM05D006185 ORTHO05D007572 1.5e-80 303.1 189 72.5
SGA_v2.0_scaffold296G47554 Striga asiatica HOM05D006185 ORTHO05D007572 1.9e-80 302.8 187 73.3
Prupe.7G195700 Prunus persica HOM05D006185 ORTHO05D007572 2.5e-80 302.4 189 72.0
RcHm_v2.0_Chr2g0095441 Rosa chinensis HOM05D006185 ORTHO05D007572 2.5e-80 302.4 189 72.0
Ah.09g229250 Amaranthus hybridus HOM05D006185 ORTHO05D007572 4.3e-80 301.6 186 74.2
AT1G19130 Arabidopsis thaliana HOM05D006185 ORTHO05D007572 4.3e-80 301.6 190 72.6
EL10Ac8g19027 Beta vulgaris HOM05D006185 ORTHO05D007572 4.3e-80 301.6 186 74.2
CAN.G1661.20 Capsicum annuum HOM05D006185 ORTHO05D007572 4.3e-80 301.6 190 70.5
Sc06g0006920 Simmondsia chinensis HOM05D006185 ORTHO05D007572 5.6e-80 301.2 186 74.2
TAR624G1115 Trochodendron aralioides HOM05D006185 ORTHO05D007572 5.6e-80 301.2 191 75.4
Carub.0001s1876 Capsella rubella HOM05D006185 ORTHO05D007572 7.3e-80 300.8 190 72.6
Aa31LG7G3870 Aethionema arabicum HOM05D006185 ORTHO05D007572 1.2e-79 300.1 190 72.1
A08p30000 Brassica napus HOM05D006185 ORTHO05D007572 1.2e-79 300.1 190 70.5
Hund26074 Selenicereus undatus HOM05D006185 ORTHO05D007572 1.2e-79 300.1 186 73.1
BraA08t34935Z Brassica rapa HOM05D006185 ORTHO05D007572 1.6e-79 299.7 190 70.5
MD02G1095400 Malus domestica HOM05D006185 ORTHO05D007572 1.6e-79 299.7 189 74.6
GSVIVG01015050001 Vitis vinifera HOM05D006185 ORTHO05D007572 1.6e-79 299.7 190 70.5
FAN26G0065 Fragaria x ananassa HOM05D006185 ORTHO05D007572 2.1e-79 299.3 186 71.0
FAN26G3397 Fragaria x ananassa HOM05D006185 ORTHO05D007572 2.1e-79 299.3 186 71.0
vmacro17122 Vaccinium macrocarpon HOM05D006185 ORTHO05D007572 3.6e-79 298.5 187 72.7
BcaC07g38980 Brassica carinata HOM05D006185 ORTHO05D007572 4.7e-79 298.1 190 70.0
HanXRQChr04g0125931 Helianthus annuus HOM05D006185 ORTHO05D007572 6.2e-79 297.7 188 73.9
PGR044G1997 Punica granatum HOM05D006185 ORTHO05D007572 8.1e-79 297.4 190 73.2
Rhsim05G0005100 Rhododendron simsii HOM05D006185 ORTHO05D007572 8.1e-79 297.4 188 74.5
C08p19220 Brassica napus HOM05D006185 ORTHO05D007572 1.4e-78 296.6 190 69.5
BolC8t49541H Brassica oleracea HOM05D006185 ORTHO05D007572 1.4e-78 296.6 190 69.5
Ca_09309_v3 Cicer arietinum L. HOM05D006185 ORTHO05D007572 2.3e-78 295.8 189 70.9
Lsat_1_v5_gn_8_85701 Lactuca sativa HOM05D006185 ORTHO05D007572 2.3e-78 295.8 189 73.0
Psat7g057800 Pisum sativum HOM05D006185 ORTHO05D007572 2.3e-78 295.8 187 72.2
Sabra06G0109300 Salix brachista HOM05D006185 ORTHO05D007572 5.2e-78 294.7 221 64.3
BcaB03g12935 Brassica carinata HOM05D006185 ORTHO05D007572 6.8e-78 294.3 191 69.6
FvH4_1g09020 Fragaria vesca HOM05D006185 ORTHO05D007572 6.8e-78 294.3 186 69.9
FAN19G1369 Fragaria x ananassa HOM05D006185 ORTHO05D007572 6.8e-78 294.3 186 69.9
TPR.G12562 Trifolium pratense HOM05D006185 ORTHO05D007572 6.8e-78 294.3 189 70.4
FAN23G1580 Fragaria x ananassa HOM05D006185 ORTHO05D007572 4.4e-77 291.6 186 69.9
Lalb_Chr07g0181271 Lupinus albus HOM05D006185 ORTHO05D007572 7.5e-77 290.8 189 72.0
Nn6g35681 Nelumbo nucifera HOM05D006185 ORTHO05D007572 7.5e-77 290.8 189 73.5
Lj4g0025093 Lotus japonicus HOM05D006185 ORTHO05D007572 2.2e-76 289.3 190 71.6
DCAR_010492 Daucus carota HOM05D006185 ORTHO05D007572 2.9e-76 288.9 185 68.6
Medtr4g125100 Medicago truncatula HOM05D006185 ORTHO05D007572 1.1e-75 287.0 190 69.5
Actinidia30236 Actinidia chinensis HOM05D006185 ORTHO05D007572 1.9e-75 286.2 226 61.5
VMungo1215G2404 Vigna mungo HOM05D006185 ORTHO05D007572 1.6e-74 283.1 189 68.8
Phvul.003G129600 Phaseolus vulgaris HOM05D006185 ORTHO05D007572 3.5e-74 282.0 189 68.3
unitig_699.g19263 Utricularia gibba HOM05D000454 ORTHO05D007572 3.5e-74 282.0 182 70.9
Glyma.13G111600 Glycine max HOM05D006185 ORTHO05D007572 4.6e-74 281.6 195 66.2
Hund26091 Selenicereus undatus HOM05D006185 ORTHO05D007572 7.8e-74 280.8 190 70.0
MBI13_g00698_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 1.3e-73 280.0 190 73.2
Aqoxy7G04191 Aquilegia oxysepala HOM05D006185 ORTHO05D007572 5.1e-73 278.1 193 70.5
Sc08g0009100 Simmondsia chinensis HOM05D006185 ORTHO05D007572 7.3e-72 274.2 189 68.3
EL10Ac8g18996 Beta vulgaris HOM05D006185 ORTHO05D007572 1.6e-71 273.1 190 68.9
Eucgr.C00790 Eucalyptus grandis HOM05D006185 ORTHO05D007572 3.6e-71 271.9 188 69.7
Nn5g27974 Nelumbo nucifera HOM05D006185 ORTHO05D007572 3.1e-70 268.9 189 67.7
AUR62028278 Chenopodium quinoa HOM05D006185 ORTHO05D007572 1.7e-68 263.1 186 67.7
HanXRQChr06g0168681 Helianthus annuus HOM05D006185 ORTHO05D007572 2.2e-68 262.7 183 66.1
AUR62028304 Chenopodium quinoa HOM05D006185 ORTHO05D007572 1.9e-67 259.6 186 64.5
AUR62025276 Chenopodium quinoa HOM05D006185 ORTHO05D007572 2.1e-66 256.1 145 79.3
AUR62025298 Chenopodium quinoa HOM05D006185 ORTHO05D007572 6.0e-66 254.6 186 64.0
HPP92_004362 Vanilla planifolia HOM05D006185 ORTHO05D007572 7.8e-66 254.2 185 67.0
ECA236G2592 Erigeron canadensis HOM05D006185 ORTHO05D007572 5.1e-65 251.5 184 64.7
arahy.Tifrunner.gnm1.ann1.85MSRM Arachis hypogaea HOM05D006185 ORTHO05D007572 4.3e-64 248.4 190 63.2
Sed0027040 Sechium edule HOM05D006185 ORTHO05D007572 4.3e-64 248.4 146 73.3
arahy.Tifrunner.gnm1.ann1.Y0H2IU Arachis hypogaea HOM05D006185 ORTHO05D007572 5.6e-64 248.1 190 62.6
Lsat_1_v5_gn_8_85721 Lactuca sativa HOM05D006185 ORTHO05D007572 7.3e-64 247.7 184 61.4
Os08g0455800 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 3.6e-63 245.4 184 64.7
Gohir.A06G078100 Gossypium hirsutum HOM05D006185 ORTHO05D007572 8.1e-63 244.2 186 62.4
ATR0006G060 Amborella trichopoda HOM05D006185 ORTHO05D007572 1.1e-62 243.8 188 62.8
Zm00001eb040490 Zea mays HOM05D006185 ORTHO05D007572 1.8e-62 243.0 184 64.7
MBI19_g05291_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 5.8e-61 238.0 180 67.2
Mapoly0007s0060 Marchantia polymorpha HOM05D006185 ORTHO05D007572 2.2e-60 236.1 186 61.3
MBI13_g47248_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 1.4e-59 233.4 190 63.7
Lalb_Chr12g0200241 Lupinus albus HOM05D006185 ORTHO05D007572 7.8e-58 227.6 186 58.1
SEGI_13235 Sequoiadendron giganteum HOM05D006185 ORTHO05D007572 2.3e-57 226.1 187 61.5
Gohir.D06G077100 Gossypium hirsutum HOM05D006185 ORTHO05D007572 2.8e-55 219.2 132 73.5
Os06g0198500 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 2.8e-55 219.2 184 59.2
SMO340G0144 Selaginella moellendorffii HOM05D006185 ORTHO05D007572 3.1e-54 215.7 181 56.9
Pp3c9_22400 Physcomitrium patens HOM05D006185 ORTHO05D007572 4.0e-54 215.3 188 54.3
MSTRG.26479 Avicennia marina HOM05D006185 ORTHO05D007572 3.8e-36 155.6 111 64.9
CARHR019730 Cardamine hirsuta HOM05D006185 ORTHO05D007572 1.3e-31 140.6 82 79.3
FAN28G1197 Fragaria x ananassa HOM05D006185 ORTHO05D007572 6.3e-31 138.3 83 72.3
Ah.14g084750 Amaranthus hybridus HOM05D006185 ORTHO05D007572 4.1e-30 135.6 110 60.0
MBI14_g46913_MAGBIO Magnolia biondii HOM05D006185 ORTHO05D007572 6.9e-30 134.8 101 67.3
Os06g0198600 Oryza sativa ssp. japonica HOM05D006185 ORTHO05D007572 2.2e-20 103.2 116 50.0
Eucgr.C00789 Eucalyptus grandis HOM05D006185 ORTHO05D007572 8.5e-20 101.3 87 55.2
BcaB02g10882 Brassica carinata HOM05D006185 ORTHO05D007572 5.5e-11 72.0 78 44.9


User provided reference genes

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