Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Atru.chr7.1363 Acer truncatum HOM05D006226 ORTHO05D007738 1.2e-277 959.1 474 100.0
Ciclev10007624m.g Citrus clementina HOM05D006226 ORTHO05D007738 9.9e-203 710.3 467 75.8
GSVIVG01015381001 Vitis vinifera HOM05D006226 ORTHO05D007738 5.7e-182 641.3 476 68.3
Cfa003249 Carpinus fangiana HOM05D006226 ORTHO05D007738 4.8e-181 638.3 467 69.0
CiPaw.03G218400 Carya illinoinensis HOM05D006226 ORTHO05D007738 1.5e-179 633.3 477 69.8
Potri.018G081500 Populus trichocarpa HOM05D006226 ORTHO05D007738 2.2e-178 629.4 480 68.1
QL02p040023 Quercus lobata HOM05D006226 ORTHO05D007738 1.4e-177 626.7 480 67.5
Sabra18G0068600 Salix brachista HOM05D006226 ORTHO05D007738 3.9e-175 618.6 478 67.4
COL.COLO4_34848 Corchorus olitorius HOM05D006226 ORTHO05D007738 1.5e-174 616.7 476 68.3
Thecc.09G109000 Theobroma cacao HOM05D006226 ORTHO05D007738 3.7e-173 612.1 479 67.6
Manes.16G114900 Manihot esculenta HOM05D006226 ORTHO05D007738 5.9e-171 604.7 481 65.9
Gorai.009G025300 Gossypium raimondii HOM05D006226 ORTHO05D007738 7.7e-171 604.4 475 65.5
TAR383G0867 Trochodendron aralioides HOM05D006226 ORTHO05D007738 5.0e-170 601.7 474 65.4
Gohir.A05G023700 Gossypium hirsutum HOM05D006226 ORTHO05D007738 2.5e-169 599.4 475 64.8
Prupe.7G232400 Prunus persica HOM05D006226 ORTHO05D007738 1.6e-168 596.7 474 65.2
CANSAT56G2062 Cannabis sativa HOM05D006226 ORTHO05D007738 2.1e-168 596.3 477 64.6
Actinidia32679 Actinidia chinensis HOM05D006226 ORTHO05D007738 3.9e-167 592.0 476 64.5
Rhsim01G0096900 Rhododendron simsii HOM05D006226 ORTHO05D007738 8.8e-167 590.9 475 64.6
ClCG06G008620 Citrullus lanatus HOM05D006226 ORTHO05D007738 7.4e-166 587.8 484 61.8
FvH4_1g04570 Fragaria vesca HOM05D006226 ORTHO05D007738 9.1e-164 580.9 478 63.4
RcHm_v2.0_Chr2g0090271 Rosa chinensis HOM05D006226 ORTHO05D007738 1.6e-163 580.1 475 63.6
CsaV3_1G025440 Cucumis sativus L. HOM05D006226 ORTHO05D007738 4.5e-163 578.6 422 65.4
MELO3C024624.2 Cucumis melo HOM05D006226 ORTHO05D007738 5.9e-163 578.2 478 61.3
FAN19G1825 Fragaria x ananassa HOM05D006226 ORTHO05D007738 7.7e-163 577.8 478 63.2
Phvul.004G164600 Phaseolus vulgaris HOM05D006226 ORTHO05D007738 1.5e-161 573.5 410 70.5
FAN26G0472 Fragaria x ananassa HOM05D006226 ORTHO05D007738 1.9e-161 573.2 478 63.0
Sc16g0007880 Simmondsia chinensis HOM05D006226 ORTHO05D007738 3.2e-161 572.4 477 62.3
VMungo0464G1421 Vigna mungo HOM05D006226 ORTHO05D007738 9.4e-161 570.9 482 63.3
Dinv36642 Davidia involucrata HOM05D006226 ORTHO05D007738 1.6e-160 570.1 379 74.9
Cpa.g.sc23.97 Carica papaya HOM05D006226 ORTHO05D007738 4.7e-160 568.5 409 72.1
THA.LOC104808766 Tarenaya hassleriana HOM05D006226 ORTHO05D007738 4.7e-160 568.5 479 60.5
FAN23G2910 Fragaria x ananassa HOM05D006226 ORTHO05D007738 8.0e-160 567.8 478 62.6
arahy.Tifrunner.gnm1.ann1.9IQ1SY Arachis hypogaea HOM05D006226 ORTHO05D007738 1.0e-159 567.4 480 62.7
Sed0016798 Sechium edule HOM05D006226 ORTHO05D007738 1.0e-159 567.4 456 62.9
Medtr6g087530 Medicago truncatula HOM05D006226 ORTHO05D007738 1.8e-159 566.6 482 61.6
arahy.Tifrunner.gnm1.ann1.ZKYF3I Arachis hypogaea HOM05D006226 ORTHO05D007738 3.0e-159 565.8 480 62.7
Lj2g0027193 Lotus japonicus HOM05D006226 ORTHO05D007738 1.2e-158 563.9 480 62.1
AUR62010999 Chenopodium quinoa HOM05D006226 ORTHO05D007738 1.5e-158 563.5 476 62.4
MD15G1183800 Malus domestica HOM05D006226 ORTHO05D007738 4.4e-158 562.0 476 62.0
Glyma.07G085400 Glycine max HOM05D006226 ORTHO05D007738 5.7e-158 561.6 480 63.8
Psat1g043440 Pisum sativum HOM05D006226 ORTHO05D007738 2.8e-157 559.3 479 61.4
AUR62021510 Chenopodium quinoa HOM05D006226 ORTHO05D007738 2.4e-156 556.2 476 61.6
Glyma.09G191500 Glycine max HOM05D006226 ORTHO05D007738 2.4e-156 556.2 478 62.8
Aqoxy7G03848 Aquilegia oxysepala HOM05D006226 ORTHO05D007738 5.3e-156 555.1 426 64.1
PSO210G1415 Papaver somniferum HOM05D006226 ORTHO05D007738 5.3e-156 555.1 430 64.9
vmacro20706 Vaccinium macrocarpon HOM05D006226 ORTHO05D007738 2.7e-155 552.7 554 55.8
CARHR100790 Cardamine hirsuta HOM05D006226 ORTHO05D007738 7.7e-155 551.2 476 62.0
AT3G24560 Arabidopsis thaliana HOM05D006226 ORTHO05D007738 1.0e-154 550.8 476 62.0
PSO210G0226 Papaver somniferum HOM05D006226 ORTHO05D007738 2.9e-154 549.3 431 64.0
Lj7C652G7 Lonicera japonica HOM05D006226 ORTHO05D007738 3.8e-154 548.9 415 67.5
Carub.0003s2495 Capsella rubella HOM05D006226 ORTHO05D007738 1.5e-153 547.0 476 62.0
TPR.G10046 Trifolium pratense HOM05D006226 ORTHO05D007738 1.5e-153 547.0 411 66.7
BraA07t28567Z Brassica rapa HOM05D006226 ORTHO05D007738 2.5e-153 546.2 474 61.4
Sp3g22350 Schrenkiella parvula HOM05D006226 ORTHO05D007738 1.6e-152 543.5 475 60.2
BcaB06g26659 Brassica carinata HOM05D006226 ORTHO05D007738 2.1e-152 543.1 474 60.8
BcaC06g35722 Brassica carinata HOM05D006226 ORTHO05D007738 2.1e-152 543.1 474 60.5
BolC7t41639H Brassica oleracea HOM05D006226 ORTHO05D007738 2.1e-152 543.1 474 60.5
Cc06_g09770 Coffea canephora HOM05D006226 ORTHO05D007738 2.1e-152 543.1 478 59.2
C07p11670 Brassica napus HOM05D006226 ORTHO05D007738 6.8e-151 538.1 474 60.1
Nitab4.5_0004070g0080 Nicotiana tabacum HOM05D006226 ORTHO05D007738 8.8e-151 537.7 478 58.6
Thhalv10002431m.g Eutrema salsugineum HOM05D006226 ORTHO05D007738 9.8e-150 534.3 475 59.6
PGR142G1694 Punica granatum HOM05D006226 ORTHO05D007738 6.3e-149 531.6 412 66.5
A07p07760 Brassica napus HOM05D006226 ORTHO05D007738 1.1e-148 530.8 496 58.5
AL3G40100 Arabidopsis lyrata HOM05D006226 ORTHO05D007738 1.6e-147 526.9 397 67.0
HanXRQChr12g0354991 Helianthus annuus HOM05D006226 ORTHO05D007738 1.6e-147 526.9 478 58.8
CAN.G644.14 Capsicum annuum HOM05D006226 ORTHO05D007738 4.7e-144 515.4 474 57.6
Sopen11g026750 Solanum pennellii HOM05D006226 ORTHO05D007738 4.7e-144 515.4 476 56.5
Eucgr.C01033 Eucalyptus grandis HOM05D006226 ORTHO05D007738 1.0e-143 514.2 398 64.8
ECA233G1203 Erigeron canadensis HOM05D006226 ORTHO05D007738 2.2e-141 506.5 398 63.3
PGSC0003DMG400026545 Solanum tuberosum HOM05D006226 ORTHO05D007738 4.9e-141 505.4 408 62.0
Nn8g39152 Nelumbo nucifera HOM05D006226 ORTHO05D007738 3.5e-139 499.2 350 71.1
SalBow6G3053 Salvia bowleyana HOM05D006226 ORTHO05D007738 3.5e-139 499.2 475 55.4
Lsat_1_v5_gn_8_3640 Lactuca sativa HOM05D006226 ORTHO05D007738 7.8e-139 498.0 491 55.6
Haze_25736 Corylus avellana HOM05D006226 ORTHO05D007738 5.0e-138 495.4 310 77.7
Migut.C00317 Erythranthe guttata HOM05D006226 ORTHO05D007738 1.5e-137 493.8 425 59.1
Nitab4.5_0006735g0020 Nicotiana tabacum HOM05D006226 ORTHO05D007738 6.8e-135 485.0 494 53.2
MBI04_g22018_MAGBIO Magnolia biondii HOM05D006226 ORTHO05D007738 1.3e-133 480.7 351 68.1
Migut.G00900 Erythranthe guttata HOM05D006226 ORTHO05D007738 8.3e-133 478.0 421 57.5
Aa31sc29G50 Aethionema arabicum HOM05D006226 ORTHO05D007738 1.4e-132 477.2 489 55.2
DCAR_002532 Daucus carota HOM05D006226 ORTHO05D007738 3.9e-130 469.2 400 59.8
Migut.K01516 Erythranthe guttata HOM05D006226 ORTHO05D007738 5.0e-130 468.8 429 56.4
SGA_v2.0_scaffold57G20229 Striga asiatica HOM05D006226 ORTHO05D007738 1.5e-129 467.2 488 51.4
FAN28G0796 Fragaria x ananassa HOM05D006226 ORTHO05D007738 1.6e-128 463.8 386 62.7
EL10Ac8g18501 Beta vulgaris HOM05D006226 ORTHO05D007738 7.5e-126 454.9 486 56.0
Lalb_Chr06g0174391 Lupinus albus HOM05D006226 ORTHO05D007738 1.3e-122 444.1 318 69.5
Zm00001eb237720 Zea mays HOM05D006226 ORTHO05D007738 7.5e-118 428.3 432 50.7
Gohir.D05G025200 Gossypium hirsutum HOM05D006226 ORTHO05D007738 1.0e-114 417.9 294 71.4
Hund09200 Selenicereus undatus HOM05D006226 ORTHO05D007738 1.4e-111 407.5 476 50.8
CSS0010508 Camellia sinensis var. sinensis HOM05D006226 ORTHO05D007738 4.6e-107 392.5 385 56.6
CSS0044649 Camellia sinensis var. sinensis HOM05D006226 ORTHO05D007738 4.6e-107 392.5 385 56.6
ATR0315G013 Amborella trichopoda HOM05D006226 ORTHO05D007738 2.8e-104 383.3 308 63.0
Solyc11g067040.2 Solanum lycopersicum HOM05D006226 ORTHO05D007738 1.6e-99 367.5 339 56.6
CANSAT56G4481 Cannabis sativa HOM05D006226 ORTHO05D007738 1.7e-98 364.0 267 68.2
Peaxi162Scf01284g00025 Petunia axillaris HOM05D006226 ORTHO05D007738 6.6e-98 362.1 340 57.1
Ah.14g081980 Amaranthus hybridus HOM05D006226 ORTHO05D007738 2.4e-95 353.6 292 59.6
unitig_748.g7367 Utricularia gibba HOM05D006226 ORTHO05D007738 2.9e-85 320.1 436 40.1
Oeu002240.1 Olea europaea HOM05D006226 ORTHO05D007738 9.3e-84 315.1 254 63.8
Mapoly0045s0077 Marchantia polymorpha HOM05D006226 ORTHO05D007738 1.3e-74 284.6 359 43.2
AagrBONN_evm.TU.Sc2ySwM_368.2586 Anthoceros agrestis HOM05D006226 ORTHO05D007738 1.1e-73 281.6 363 42.1
SMO170G0077 Selaginella moellendorffii HOM05D006226 ORTHO05D007738 1.3e-64 251.5 367 40.1
Hma1.2p1_1463F.1_g285100 Hydrangea macrophylla HOM05D006226 ORTHO05D007738 7.9e-59 232.3 171 69.0
CDE04G3650 Ceratophyllum demersum HOM05D001758 ORTHO05D005969 1.1e-49 201.8 146 62.3
CANSAT56G3567 Cannabis sativa HOM05D006226 ORTHO05D007738 7.4e-49 199.1 186 58.1
SGA_v2.0_scaffold88G27188 Striga asiatica HOM05D006226 ORTHO05D007738 3.3e-41 173.7 205 45.4
Pp3c5_3840 Physcomitrium patens HOM05D006226 ORTHO05D007738 9.7e-41 172.2 228 41.2
SGA_v2.0_scaffold3110G54276 Striga asiatica HOM05D006226 ORTHO05D007738 5.3e-39 166.4 136 59.6
Os02g0266500 Oryza sativa ssp. japonica HOM05D006226 ORTHO05D007738 3.6e-35 153.7 123 59.3
ECA234G2375 Erigeron canadensis HOM05D006226 ORTHO05D007738 3.0e-34 150.6 373 29.2
Solyc11g067030.2 Solanum lycopersicum HOM05D006226 ORTHO05D007738 3.0e-34 150.6 144 52.8
Peaxi162Scf01284g00019 Petunia axillaris HOM05D006226 ORTHO05D007738 6.8e-34 149.4 136 54.4
Nitab4.5_0004070g0120 Nicotiana tabacum HOM05D006226 ORTHO05D007738 1.7e-32 144.8 194 43.8
CBR_g23439 Chara braunii HOM05D000019 ORTHO05D000002 3.7e-32 143.7 249 37.8
SEGI_09304 Sequoiadendron giganteum HOM05D006226 ORTHO05D007738 6.6e-29 132.9 134 45.5
MBI04_g29967_MAGBIO Magnolia biondii HOM05D006226 ORTHO05D007738 4.7e-27 126.7 190 45.3
Lalb_Chr06g0174401 Lupinus albus HOM05D006226 ORTHO05D007738 9.2e-23 112.5 89 58.4
Actinidia07412 Actinidia chinensis HOM05D006226 ORTHO05D007738 7.3e-20 102.8 301 31.6
HPP92_005262 Vanilla planifolia HOM05D006226 ORTHO05D007738 5.8e-17 93.2 77 62.3
Hma1.2p1_1463F.1_g285110 Hydrangea macrophylla HOM05D006226 ORTHO05D007738 2.2e-16 91.3 80 61.2
SEGI_25817 Sequoiadendron giganteum HOM05D006226 ORTHO05D007738 5.4e-15 86.7 78 53.8
HanXRQChr00c0062g0571551 Helianthus annuus HOM05D006226 ORTHO05D007738 2.5e-12 77.8 91 48.4
ATR0315G018 Amborella trichopoda HOM05D006226 ORTHO05D007738 1.4e-10 72.0 80 51.2
HPP92_005261 Vanilla planifolia HOM05D006226 ORTHO05D007738 4.0e-10 70.5 91 39.6
MCO09G126 Micromonas commoda HOM05D006226 ORTHO05D007738 5.2e-10 70.1 210 27.6


User provided reference genes

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